RNA–Protein interactions for RNA: ENST00000516549.1

RN7SKP135-201, Transcript of RNA, 7SK small nuclear pseudogene 135, humanhuman

BASIC

Gene RN7SKP135, Length 247 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP135-201ENST00000516549 TBC1D9Q6ZT07 1266 aa13.25□□□□□ -0.29
RN7SKP135-201ENST00000516549 NSUN4Q96CB9 384 aaKnown RBP13.25□□□□□ -0.29
RN7SKP135-201ENST00000516549 IDI2Q9BXS1 227 aa13.25□□□□□ -0.29
RN7SKP135-201ENST00000516549 SNRKQ9NRH2 765 aa13.25□□□□□ -0.29
RN7SKP135-201ENST00000516549 TLR7Q9NYK1 1049 aaKnown RBP13.25□□□□□ -0.29
RN7SKP135-201ENST00000516549 DOCK2Q92608 1830 aa13.25□□□□□ -0.29
RN7SKP135-201ENST00000516549 OTOFQ9HC10 1997 aa13.24□□□□□ -0.29
RN7SKP135-201ENST00000516549 USP2O75604 605 aaPredicted RBP13.24□□□□□ -0.29
RN7SKP135-201ENST00000516549 ZBTB48P10074 688 aaPredicted RBP13.24□□□□□ -0.29
RN7SKP135-201ENST00000516549 ZAP70P43403 619 aa13.24□□□□□ -0.29
RN7SKP135-201ENST00000516549 SREBF2Q12772 1141 aa13.24□□□□□ -0.29
RN7SKP135-201ENST00000516549 CERS3Q8IU89 383 aa13.24□□□□□ -0.29
RN7SKP135-201ENST00000516549 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.24□□□□□ -0.29
RN7SKP135-201ENST00000516549 PRDM10Q9NQV6 1147 aa13.24□□□□□ -0.29
RN7SKP135-201ENST00000516549 CSADQ9Y600 493 aa13.24□□□□□ -0.29
RN7SKP135-201ENST00000516549 MYO5AQ9Y4I1 1855 aaKnown RBP13.24□□□□□ -0.29
RN7SKP135-201ENST00000516549 CYP2E1P05181 493 aaPredicted RBP13.23□□□□□ -0.29
RN7SKP135-201ENST00000516549 TCP10Q12799 353 aa13.23□□□□□ -0.29
RN7SKP135-201ENST00000516549 MAP3K12Q12852 859 aa13.23□□□□□ -0.29
RN7SKP135-201ENST00000516549 ZSCAN29Q8IWY8 852 aaPredicted RBP13.23□□□□□ -0.29
RN7SKP135-201ENST00000516549 GPATCH3Q96I76 525 aa13.23□□□□□ -0.29
RN7SKP135-201ENST00000516549 ZNF341Q9BYN7 854 aa13.23□□□□□ -0.29
RN7SKP135-201ENST00000516549 DCTPP1Q9H773 170 aa13.23□□□□□ -0.29
RN7SKP135-201ENST00000516549 SAGE1Q9NXZ1 904 aa13.23□□□□□ -0.29
RN7SKP135-201ENST00000516549 LAMB1P07942 1786 aa13.22□□□□□ -0.29
RN7SKP135-201ENST00000516549 SPDYE4A6NLX3 237 aa13.22□□□□□ -0.29
RN7SKP135-201ENST00000516549 IDH1O75874 414 aaKnown RBP13.22□□□□□ -0.29
RN7SKP135-201ENST00000516549 RGS3P49796 1198 aa13.22□□□□□ -0.29
RN7SKP135-201ENST00000516549 INHBEP58166 350 aa13.22□□□□□ -0.29
RN7SKP135-201ENST00000516549 MAP3K9P80192 1104 aa13.22□□□□□ -0.29
RN7SKP135-201ENST00000516549 NFIAQ12857 509 aa13.22□□□□□ -0.29
RN7SKP135-201ENST00000516549 SPRYD7Q5W111 196 aa13.22□□□□□ -0.29
RN7SKP135-201ENST00000516549 CRBNQ96SW2 442 aa13.22□□□□□ -0.29
RN7SKP135-201ENST00000516549 BCL11AQ9H165 835 aa13.22□□□□□ -0.29
RN7SKP135-201ENST00000516549 ZBTB47Q9UFB7 747 aaPredicted RBP13.22□□□□□ -0.29
RN7SKP135-201ENST00000516549 RFX7Q2KHR2 1363 aa13.21□□□□□ -0.29
RN7SKP135-201ENST00000516549 MANSC4A6NHS7 340 aaPredicted RBP13.21□□□□□ -0.29
RN7SKP135-201ENST00000516549 HSPA8P11142 646 aaKnown RBP13.21□□□□□ -0.29
RN7SKP135-201ENST00000516549 MAMSTRQ6ZN01 415 aa13.21□□□□□ -0.29
RN7SKP135-201ENST00000516549 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.21□□□□□ -0.29
RN7SKP135-201ENST00000516549 WNK4Q96J92 1243 aa13.21□□□□□ -0.29
RN7SKP135-201ENST00000516549 WRNIP1Q96S55 665 aa13.21□□□□□ -0.29
RN7SKP135-201ENST00000516549 CSRNP1Q96S65 589 aa13.21□□□□□ -0.29
RN7SKP135-201ENST00000516549 PIH1D3Q9NQM4 214 aaKnown RBP13.21□□□□□ -0.29
RN7SKP135-201ENST00000516549 FAM198AQ9UFP1 575 aa13.21□□□□□ -0.29
RN7SKP135-201ENST00000516549 FZD1Q9UP38 647 aa13.21□□□□□ -0.29
RN7SKP135-201ENST00000516549 COL2A1P02458 1487 aaPredicted RBP13.21□□□□□ -0.3
RN7SKP135-201ENST00000516549 WDHD1O75717 1129 aaPredicted RBP13.2□□□□□ -0.3
RN7SKP135-201ENST00000516549 ALDH1A1P00352 501 aa13.2□□□□□ -0.3
RN7SKP135-201ENST00000516549 LBX1P52954 281 aa13.2□□□□□ -0.3
RN7SKP135-201ENST00000516549 RHBDL3P58872 404 aa13.2□□□□□ -0.3
RN7SKP135-201ENST00000516549 PPP4CP60510 307 aa13.2□□□□□ -0.3
RN7SKP135-201ENST00000516549 PICALMQ13492 652 aa13.2□□□□□ -0.3
RN7SKP135-201ENST00000516549 CDAN1Q8IWY9 1227 aa13.2□□□□□ -0.3
RN7SKP135-201ENST00000516549 TEX11Q8IYF3 940 aa13.2□□□□□ -0.3
RN7SKP135-201ENST00000516549 ZNF384Q8TF68 577 aa13.2□□□□□ -0.3
RN7SKP135-201ENST00000516549 CLMNQ96JQ2 1002 aa13.2□□□□□ -0.3
RN7SKP135-201ENST00000516549 ZIC5Q96T25 663 aa13.2□□□□□ -0.3
RN7SKP135-201ENST00000516549 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.2□□□□□ -0.3
RN7SKP135-201ENST00000516549 FOCADQ5VW36 1801 aa13.2□□□□□ -0.3
RN7SKP135-201ENST00000516549 ATP5JP18859 108 aa13.19□□□□□ -0.3
RN7SKP135-201ENST00000516549 CYP7A1P22680 504 aa13.19□□□□□ -0.3
RN7SKP135-201ENST00000516549 TM4SF4P48230 202 aa13.19□□□□□ -0.3
RN7SKP135-201ENST00000516549 MKRN3Q13064 507 aaKnown RBP13.19□□□□□ -0.3
RN7SKP135-201ENST00000516549 VGLL4Q14135 290 aa13.19□□□□□ -0.3
RN7SKP135-201ENST00000516549 OTUD7BQ6GQQ9 843 aa13.19□□□□□ -0.3
RN7SKP135-201ENST00000516549 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.19□□□□□ -0.3
RN7SKP135-201ENST00000516549 DNAJC2Q99543 621 aaKnown RBP13.19□□□□□ -0.3
RN7SKP135-201ENST00000516549 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.19□□□□□ -0.3
RN7SKP135-201ENST00000516549 ELP3Q9H9T3 547 aa13.19□□□□□ -0.3
RN7SKP135-201ENST00000516549 AATFQ9NY61 560 aaKnown RBP eCLIP13.19□□□□□ -0.3
RN7SKP135-201ENST00000516549 PCDHB15Q9Y5E8 787 aa13.19□□□□□ -0.3
RN7SKP135-201ENST00000516549 MYH7P12883 1935 aa13.19□□□□□ -0.3
RN7SKP135-201ENST00000516549 ATRNL1Q5VV63 1379 aa13.19□□□□□ -0.3
RN7SKP135-201ENST00000516549 CDK5RAP2Q96SN8 1893 aa13.19□□□□□ -0.3
RN7SKP135-201ENST00000516549 MIGA2Q7L4E1 593 aa13.18□□□□□ -0.3
RN7SKP135-201ENST00000516549 ERO1BQ86YB8 467 aa13.18□□□□□ -0.3
RN7SKP135-201ENST00000516549 MAGEB6Q8N7X4 407 aa13.18□□□□□ -0.3
RN7SKP135-201ENST00000516549 OPTNQ96CV9 577 aa13.18□□□□□ -0.3
RN7SKP135-201ENST00000516549 DHX36Q9H2U1 1008 aaKnown RBP13.18□□□□□ -0.3
RN7SKP135-201ENST00000516549 ECHDC1Q9NTX5 307 aa13.18□□□□□ -0.3
RN7SKP135-201ENST00000516549 PAG1Q9NWQ8 432 aa13.18□□□□□ -0.3
RN7SKP135-201ENST00000516549 RNF186Q9NXI6 227 aa13.18□□□□□ -0.3
RN7SKP135-201ENST00000516549 PCNTO95613 3336 aa13.17□□□□□ -0.3
RN7SKP135-201ENST00000516549 SPDYE5A6NIY4 337 aa13.17□□□□□ -0.3
RN7SKP135-201ENST00000516549 GOLIM4O00461 696 aa13.17□□□□□ -0.3
RN7SKP135-201ENST00000516549 TRPA1O75762 1119 aa13.17□□□□□ -0.3
RN7SKP135-201ENST00000516549 GTF2A2P52657 109 aa13.17□□□□□ -0.3
RN7SKP135-201ENST00000516549 HDAC1Q13547 482 aaPredicted RBP13.17□□□□□ -0.3
RN7SKP135-201ENST00000516549 COL13A1Q5TAT6 717 aaPredicted RBP13.17□□□□□ -0.3
RN7SKP135-201ENST00000516549 SH3RF3Q8TEJ3 882 aaPredicted RBP13.17□□□□□ -0.3
RN7SKP135-201ENST00000516549 GCC1Q96CN9 775 aa13.17□□□□□ -0.3
RN7SKP135-201ENST00000516549 HAUS7Q99871 368 aa13.17□□□□□ -0.3
RN7SKP135-201ENST00000516549 OSBPL5Q9H0X9 879 aaPredicted RBP13.17□□□□□ -0.3
RN7SKP135-201ENST00000516549 BOLA2Q9H3K6 86 aa13.17□□□□□ -0.3
RN7SKP135-201ENST00000516549 ANTXR1Q9H6X2 564 aa13.17□□□□□ -0.3
RN7SKP135-201ENST00000516549 DDX4Q9NQI0 724 aaKnown RBP13.17□□□□□ -0.3
RN7SKP135-201ENST00000516549 ZNF112Q9UJU3 913 aa13.17□□□□□ -0.3
RN7SKP135-201ENST00000516549 MYH1P12882 1939 aa13.16□□□□□ -0.3
RN7SKP135-201ENST00000516549 SMARCA5O60264 1052 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms