RNA–Protein interactions for RNA: ENST00000515810.1

ATR-209, Transcript of ATR serine/threonine kinase, humanhuman

TSL 3

Gene ATR, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-209ENST00000515810 NEDD1Q8NHV4 660 aa9.62□□□□□ -0.87
ATR-209ENST00000515810 HNRNPLLQ8WVV9 542 aaKnown RBP9.62□□□□□ -0.87
ATR-209ENST00000515810 ENAMQ9NRM1 1142 aa9.62□□□□□ -0.87
ATR-209ENST00000515810 PCDHB14Q9Y5E9 798 aa9.62□□□□□ -0.87
ATR-209ENST00000515810 DCDC2CA8MYV0 355 aa9.61□□□□□ -0.87
ATR-209ENST00000515810 LINC00114Q6XXX2 140 aa9.61□□□□□ -0.87
ATR-209ENST00000515810 FERD3LQ96RJ6 166 aa9.61□□□□□ -0.87
ATR-209ENST00000515810 HIRIP3Q9BW71 556 aaPredicted RBP9.61□□□□□ -0.87
ATR-209ENST00000515810 A0A0A0MRY4 1105 aa9.6□□□□□ -0.87
ATR-209ENST00000515810 LOC100996750A0A140TA64 210 aa9.6□□□□□ -0.87
ATR-209ENST00000515810 FAM229AH3BQW9 127 aa9.6□□□□□ -0.87
ATR-209ENST00000515810 SMAD7O15105 426 aaKnown RBP9.6□□□□□ -0.87
ATR-209ENST00000515810 KLF4O43474 513 aa9.6□□□□□ -0.87
ATR-209ENST00000515810 SMARCA5O60264 1052 aaPredicted RBP9.6□□□□□ -0.87
ATR-209ENST00000515810 ZNF165P49910 485 aa9.6□□□□□ -0.87
ATR-209ENST00000515810 C12orf40Q86WS4 652 aa9.6□□□□□ -0.87
ATR-209ENST00000515810 WDR18Q9BV38 432 aa9.6□□□□□ -0.87
ATR-209ENST00000515810 KRTAP4-6Q9BYQ5 205 aa9.6□□□□□ -0.87
ATR-209ENST00000515810 KRT82Q9NSB4 513 aa9.6□□□□□ -0.87
ATR-209ENST00000515810 STRIP2Q9ULQ0 834 aa9.6□□□□□ -0.87
ATR-209ENST00000515810 ZNRF3Q9ULT6 936 aa9.6□□□□□ -0.87
ATR-209ENST00000515810 ADAMTS8Q9UP79 889 aa9.6□□□□□ -0.87
ATR-209ENST00000515810 PCDHGC5Q9Y5F6 944 aa9.6□□□□□ -0.87
ATR-209ENST00000515810 GIPRP48546 466 aa9.59□□□□□ -0.87
ATR-209ENST00000515810 EIF6P56537 245 aaKnown RBP9.59□□□□□ -0.87
ATR-209ENST00000515810 KIF4BQ2VIQ3 1234 aa9.59□□□□□ -0.87
ATR-209ENST00000515810 SCARA3Q6AZY7 606 aa9.59□□□□□ -0.87
ATR-209ENST00000515810 RUFY4Q6ZNE9 571 aa9.59□□□□□ -0.87
ATR-209ENST00000515810 REXO1Q8N1G1 1221 aaKnown RBP9.59□□□□□ -0.87
ATR-209ENST00000515810 ZSWIM4Q9H7M6 989 aa9.59□□□□□ -0.87
ATR-209ENST00000515810 EHMT1Q9H9B1 1298 aa9.59□□□□□ -0.87
ATR-209ENST00000515810 DLL1O00548 723 aa9.58□□□□□ -0.88
ATR-209ENST00000515810 AOC2O75106 756 aa9.58□□□□□ -0.88
ATR-209ENST00000515810 CKAP2LQ8IYA6 745 aa9.58□□□□□ -0.88
ATR-209ENST00000515810 FMR1NBQ8N0W7 255 aaPredicted RBP9.58□□□□□ -0.88
ATR-209ENST00000515810 OSBPL2Q9H1P3 480 aa9.58□□□□□ -0.88
ATR-209ENST00000515810 DNAJA2O60884 412 aa9.57□□□□□ -0.88
ATR-209ENST00000515810 SERINC3Q13530 473 aa9.57□□□□□ -0.88
ATR-209ENST00000515810 BMS1Q14692 1282 aaKnown RBP9.57□□□□□ -0.88
ATR-209ENST00000515810 ZC3H12AQ5D1E8 599 aaKnown RBP9.57□□□□□ -0.88
ATR-209ENST00000515810 CYFIP1Q7L576 1253 aa9.57□□□□□ -0.88
ATR-209ENST00000515810 LSRQ86X29 649 aaPredicted RBP9.57□□□□□ -0.88
ATR-209ENST00000515810 FBXO11Q86XK2 927 aa9.57□□□□□ -0.88
ATR-209ENST00000515810 PLVAPQ9BX97 442 aa9.57□□□□□ -0.88
ATR-209ENST00000515810 TNKS2Q9H2K2 1166 aa9.57□□□□□ -0.88
ATR-209ENST00000515810 PRKAG3Q9UGI9 489 aa9.57□□□□□ -0.88
ATR-209ENST00000515810 PPP1R9AQ9ULJ8 1098 aa9.57□□□□□ -0.88
ATR-209ENST00000515810 ATE1O95260 518 aa9.56□□□□□ -0.88
ATR-209ENST00000515810 HTR3BO95264 441 aa9.56□□□□□ -0.88
ATR-209ENST00000515810 MAP4K3Q8IVH8 894 aa9.56□□□□□ -0.88
ATR-209ENST00000515810 CELF2-AS1Q8N7Q2 184 aa9.56□□□□□ -0.88
ATR-209ENST00000515810 PRAMEF27A3QJZ7 478 aa9.55□□□□□ -0.88
ATR-209ENST00000515810 KIAA1211Q6ZU35 1233 aa9.55□□□□□ -0.88
ATR-209ENST00000515810 FAM177A1Q8N128 213 aaPredicted RBP9.55□□□□□ -0.88
ATR-209ENST00000515810 ELMO3Q96BJ8 720 aa9.55□□□□□ -0.88
ATR-209ENST00000515810 HIF3AQ9Y2N7 669 aa9.55□□□□□ -0.88
ATR-209ENST00000515810 SNCAIPQ9Y6H5 919 aa9.55□□□□□ -0.88
ATR-209ENST00000515810 PRR36Q9H6K5 1346 aa9.55□□□□□ -0.88
ATR-209ENST00000515810 RAB33AQ14088 237 aa9.54□□□□□ -0.88
ATR-209ENST00000515810 DUOXA2Q1HG44 320 aa9.54□□□□□ -0.88
ATR-209ENST00000515810 PPM1JQ5JR12 505 aa9.54□□□□□ -0.88
ATR-209ENST00000515810 HDXQ7Z353 690 aa9.54□□□□□ -0.88
ATR-209ENST00000515810 DTWD1Q8N5C7 304 aa9.54□□□□□ -0.88
ATR-209ENST00000515810 MICAL1Q8TDZ2 1067 aa9.54□□□□□ -0.88
ATR-209ENST00000515810 CRBNQ96SW2 442 aa9.54□□□□□ -0.88
ATR-209ENST00000515810 REV1Q9UBZ9 1251 aa9.54□□□□□ -0.88
ATR-209ENST00000515810 CNTNAP5Q8WYK1 1306 aa9.54□□□□□ -0.88
ATR-209ENST00000515810 RING1Q06587 406 aa9.53□□□□□ -0.88
ATR-209ENST00000515810 AKAP4Q5JQC9 854 aa9.53□□□□□ -0.88
ATR-209ENST00000515810 EXOSC6Q5RKV6 272 aaKnown RBP9.53□□□□□ -0.88
ATR-209ENST00000515810 SOGA3Q5TF21 947 aa9.53□□□□□ -0.88
ATR-209ENST00000515810 SHISA2Q6UWI4 295 aa9.53□□□□□ -0.88
ATR-209ENST00000515810 RBBP8NLQ8NC74 664 aaPredicted RBP9.53□□□□□ -0.88
ATR-209ENST00000515810 TMPRSS13Q9BYE2 586 aa9.53□□□□□ -0.88
ATR-209ENST00000515810 ST7Q9NRC1 585 aa9.53□□□□□ -0.88
ATR-209ENST00000515810 RAD18Q9NS91 495 aa9.53□□□□□ -0.88
ATR-209ENST00000515810 CDK11AQ9UQ88 783 aaPredicted RBP9.53□□□□□ -0.88
ATR-209ENST00000515810 K7ELQ4 463 aaPredicted RBP9.52□□□□□ -0.89
ATR-209ENST00000515810 TMPRSS2O15393 492 aa9.52□□□□□ -0.89
ATR-209ENST00000515810 PLCG1P19174 1290 aa9.52□□□□□ -0.89
ATR-209ENST00000515810 GRK4P32298 578 aa9.52□□□□□ -0.89
ATR-209ENST00000515810 ACAD11Q709F0 780 aa9.52□□□□□ -0.89
ATR-209ENST00000515810 UBE3DQ7Z6J8 389 aa9.52□□□□□ -0.89
ATR-209ENST00000515810 RUSC1Q9BVN2 902 aa9.52□□□□□ -0.89
ATR-209ENST00000515810 FAM221BA6H8Z2 402 aa9.51□□□□□ -0.89
ATR-209ENST00000515810 EIF4EBP3O60516 100 aaPredicted RBP9.51□□□□□ -0.89
ATR-209ENST00000515810 DRD2P14416 443 aa9.51□□□□□ -0.89
ATR-209ENST00000515810 NTF4P34130 210 aa9.51□□□□□ -0.89
ATR-209ENST00000515810 AGGF1Q8N302 714 aaeCLIP9.51□□□□□ -0.89
ATR-209ENST00000515810 TRIM55Q9BYV6 548 aa9.51□□□□□ -0.89
ATR-209ENST00000515810 DISC1Q9NRI5 854 aa9.51□□□□□ -0.89
ATR-209ENST00000515810 SLC22A31A6NKX4 558 aa9.5□□□□□ -0.89
ATR-209ENST00000515810 UPK3BL1B0FP48 263 aa9.5□□□□□ -0.89
ATR-209ENST00000515810 CHURC1-FNTBB4DL54 471 aa9.5□□□□□ -0.89
ATR-209ENST00000515810 UPK3BL2E5RIL1 263 aa9.5□□□□□ -0.89
ATR-209ENST00000515810 SLFN14P0C7P3 912 aa9.5□□□□□ -0.89
ATR-209ENST00000515810 RAC1P63000 192 aa9.5□□□□□ -0.89
ATR-209ENST00000515810 ID3Q02535 119 aa9.5□□□□□ -0.89
ATR-209ENST00000515810 GRIK4Q16099 956 aa9.5□□□□□ -0.89
ATR-209ENST00000515810 PPP2R5EQ16537 467 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms