RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 RHBDD1Q8TEB9 315 aa10.26□□□□□ -0.77
SFXN1-211ENST00000515736 SSH1Q8WYL5 1049 aa10.26□□□□□ -0.77
SFXN1-211ENST00000515736 SPATA32Q96LK8 384 aa10.26□□□□□ -0.77
SFXN1-211ENST00000515736 AGBL1Q96MI9 1066 aa10.26□□□□□ -0.77
SFXN1-211ENST00000515736 CAPN10Q9HC96 672 aa10.26□□□□□ -0.77
SFXN1-211ENST00000515736 BABAM1Q9NWV8 329 aa10.26□□□□□ -0.77
SFXN1-211ENST00000515736 NLRP2Q9NX02 1062 aa10.26□□□□□ -0.77
SFXN1-211ENST00000515736 FAM13BQ9NYF5 915 aa10.26□□□□□ -0.77
SFXN1-211ENST00000515736 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.26□□□□□ -0.77
SFXN1-211ENST00000515736 ABCC6O95255 1503 aa10.26□□□□□ -0.77
SFXN1-211ENST00000515736 BTAF1O14981 1849 aa10.26□□□□□ -0.77
SFXN1-211ENST00000515736 PLEKHG2Q9H7P9 1386 aa10.26□□□□□ -0.77
SFXN1-211ENST00000515736 FAM208AQ9UK61 1670 aaKnown RBP10.25□□□□□ -0.77
SFXN1-211ENST00000515736 SMARCA5O60264 1052 aaPredicted RBP10.25□□□□□ -0.77
SFXN1-211ENST00000515736 RPLP1P05386 114 aaKnown RBP10.25□□□□□ -0.77
SFXN1-211ENST00000515736 TRIM27P14373 513 aa10.25□□□□□ -0.77
SFXN1-211ENST00000515736 TMEM214Q6NUQ4 689 aaKnown RBP10.25□□□□□ -0.77
SFXN1-211ENST00000515736 ITPKCQ96DU7 683 aa10.25□□□□□ -0.77
SFXN1-211ENST00000515736 PHACTR3Q96KR7 559 aa10.25□□□□□ -0.77
SFXN1-211ENST00000515736 KLF16Q9BXK1 252 aaPredicted RBP10.25□□□□□ -0.77
SFXN1-211ENST00000515736 PDGFDQ9GZP0 370 aaPredicted RBP10.25□□□□□ -0.77
SFXN1-211ENST00000515736 PRKAG2Q9UGJ0 569 aa10.25□□□□□ -0.77
SFXN1-211ENST00000515736 SPG7Q9UQ90 795 aa10.25□□□□□ -0.77
SFXN1-211ENST00000515736 MAP3K19Q56UN5 1328 aa10.25□□□□□ -0.77
SFXN1-211ENST00000515736 BCL9O00512 1426 aa10.24□□□□□ -0.77
SFXN1-211ENST00000515736 A6NHS1 94 aa10.24□□□□□ -0.77
SFXN1-211ENST00000515736 VAMP4O75379 141 aa10.24□□□□□ -0.77
SFXN1-211ENST00000515736 MICAL2O94851 1124 aa10.24□□□□□ -0.77
SFXN1-211ENST00000515736 SULT6B1Q6IMI4 303 aa10.24□□□□□ -0.77
SFXN1-211ENST00000515736 TTC16Q8NEE8 873 aa10.24□□□□□ -0.77
SFXN1-211ENST00000515736 C7orf43Q8WVR3 580 aa10.24□□□□□ -0.77
SFXN1-211ENST00000515736 ACSBG1Q96GR2 724 aa10.24□□□□□ -0.77
SFXN1-211ENST00000515736 CHMP4AQ9BY43 222 aa10.24□□□□□ -0.77
SFXN1-211ENST00000515736 API5Q9BZZ5 524 aaKnown RBP10.24□□□□□ -0.77
SFXN1-211ENST00000515736 WASF2Q9Y6W5 498 aa10.24□□□□□ -0.77
SFXN1-211ENST00000515736 OPLAHO14841 1288 aa10.23□□□□□ -0.77
SFXN1-211ENST00000515736 CPNE3O75131 537 aaKnown RBP10.23□□□□□ -0.77
SFXN1-211ENST00000515736 RLBP1P12271 317 aa10.23□□□□□ -0.77
SFXN1-211ENST00000515736 EIF4BP23588 611 aaKnown RBP10.23□□□□□ -0.77
SFXN1-211ENST00000515736 SLC19A1P41440 591 aa10.23□□□□□ -0.77
SFXN1-211ENST00000515736 TNNI2P48788 182 aa10.23□□□□□ -0.77
SFXN1-211ENST00000515736 AMPHP49418 695 aa10.23□□□□□ -0.77
SFXN1-211ENST00000515736 RELBQ01201 579 aa10.23□□□□□ -0.77
SFXN1-211ENST00000515736 SLC15A2Q16348 729 aa10.23□□□□□ -0.77
SFXN1-211ENST00000515736 DPH6Q7L8W6 267 aa10.23□□□□□ -0.77
SFXN1-211ENST00000515736 MBIPQ9NS73 344 aa10.23□□□□□ -0.77
SFXN1-211ENST00000515736 NOP58Q9Y2X3 529 aaKnown RBP10.23□□□□□ -0.77
SFXN1-211ENST00000515736 CHD4Q14839 1912 aa10.23□□□□□ -0.77
SFXN1-211ENST00000515736 CHL1O00533 1208 aa10.22□□□□□ -0.77
SFXN1-211ENST00000515736 EIF5BO60841 1220 aaKnown RBP10.22□□□□□ -0.77
SFXN1-211ENST00000515736 ZIC2O95409 532 aaPredicted RBP10.22□□□□□ -0.77
SFXN1-211ENST00000515736 IL2RBP14784 551 aa10.22□□□□□ -0.77
SFXN1-211ENST00000515736 GTF2E1P29083 439 aaPredicted RBP10.22□□□□□ -0.77
SFXN1-211ENST00000515736 TWISTNBQ3B726 338 aaPredicted RBP10.22□□□□□ -0.77
SFXN1-211ENST00000515736 GMLQ99445 158 aa10.22□□□□□ -0.77
SFXN1-211ENST00000515736 ZNF395Q9H8N7 513 aaPredicted RBP10.22□□□□□ -0.77
SFXN1-211ENST00000515736 NOB1Q9ULX3 412 aaKnown RBP10.22□□□□□ -0.77
SFXN1-211ENST00000515736 ABCC4O15439 1325 aa10.22□□□□□ -0.77
SFXN1-211ENST00000515736 TGFBR3LH3BV60 316 aa10.21□□□□□ -0.77
SFXN1-211ENST00000515736 IGHDP01880 384 aa10.21□□□□□ -0.77
SFXN1-211ENST00000515736 HOXC9P31274 260 aa10.21□□□□□ -0.77
SFXN1-211ENST00000515736 GNL2Q13823 731 aaKnown RBP10.21□□□□□ -0.77
SFXN1-211ENST00000515736 HIF1AQ16665 826 aa10.21□□□□□ -0.77
SFXN1-211ENST00000515736 HSP90AB2PQ58FF8 381 aa10.21□□□□□ -0.77
SFXN1-211ENST00000515736 ITPRIPQ8IWB1 547 aa10.21□□□□□ -0.77
SFXN1-211ENST00000515736 CDAN1Q8IWY9 1227 aa10.21□□□□□ -0.77
SFXN1-211ENST00000515736 ANKRD24Q8TF21 1146 aa10.21□□□□□ -0.77
SFXN1-211ENST00000515736 RTF1Q92541 710 aaKnown RBP10.21□□□□□ -0.77
SFXN1-211ENST00000515736 GRIP2Q9C0E4 1043 aa10.21□□□□□ -0.77
SFXN1-211ENST00000515736 ZFAND3Q9H8U3 227 aa10.21□□□□□ -0.77
SFXN1-211ENST00000515736 ZBTB40Q9NUA8 1239 aa10.21□□□□□ -0.77
SFXN1-211ENST00000515736 DDX41Q9UJV9 622 aaKnown RBP10.21□□□□□ -0.77
SFXN1-211ENST00000515736 PTPRCP08575 1304 aa10.21□□□□□ -0.78
SFXN1-211ENST00000515736 NCAPD2Q15021 1401 aa10.21□□□□□ -0.78
SFXN1-211ENST00000515736 RGPD2P0DJD1 1756 aa10.2□□□□□ -0.78
SFXN1-211ENST00000515736 ATP2B1P20020 1258 aa10.2□□□□□ -0.78
SFXN1-211ENST00000515736 FBLN1P23142 703 aa10.2□□□□□ -0.78
SFXN1-211ENST00000515736 GPC1P35052 558 aa10.2□□□□□ -0.78
SFXN1-211ENST00000515736 PLA2G4AP47712 749 aa10.2□□□□□ -0.78
SFXN1-211ENST00000515736 PTPN12Q05209 780 aaKnown RBP10.2□□□□□ -0.78
SFXN1-211ENST00000515736 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.2□□□□□ -0.78
SFXN1-211ENST00000515736 GNASQ5JWF2 1037 aa10.2□□□□□ -0.78
SFXN1-211ENST00000515736 KDM3BQ7LBC6 1761 aa10.2□□□□□ -0.78
SFXN1-211ENST00000515736 SMC5Q8IY18 1101 aa10.2□□□□□ -0.78
SFXN1-211ENST00000515736 RHPN1Q8TCX5 695 aa10.2□□□□□ -0.78
SFXN1-211ENST00000515736 LTV1Q96GA3 475 aaPredicted RBP10.2□□□□□ -0.78
SFXN1-211ENST00000515736 MTFR1LQ9H019 292 aa10.2□□□□□ -0.78
SFXN1-211ENST00000515736 DMGDHQ9UI17 866 aaKnown RBP10.2□□□□□ -0.78
SFXN1-211ENST00000515736 PAPPAQ13219 1627 aa10.19□□□□□ -0.78
SFXN1-211ENST00000515736 WDR4P57081 412 aaKnown RBP10.19□□□□□ -0.78
SFXN1-211ENST00000515736 RACK1P63244 317 aaKnown RBP10.19□□□□□ -0.78
SFXN1-211ENST00000515736 C4orf17Q53FE4 359 aa10.19□□□□□ -0.78
SFXN1-211ENST00000515736 ZNF394Q53GI3 561 aa10.19□□□□□ -0.78
SFXN1-211ENST00000515736 IER5Q5VY09 327 aa10.19□□□□□ -0.78
SFXN1-211ENST00000515736 SPRYD7Q5W111 196 aa10.19□□□□□ -0.78
SFXN1-211ENST00000515736 XKR5Q6UX68 686 aa10.19□□□□□ -0.78
SFXN1-211ENST00000515736 ZNF654Q8IZM8 581 aa10.19□□□□□ -0.78
SFXN1-211ENST00000515736 TMEM57Q8N5G2 664 aa10.19□□□□□ -0.78
SFXN1-211ENST00000515736 IP6K1Q92551 441 aa10.19□□□□□ -0.78
SFXN1-211ENST00000515736 DHX38Q92620 1227 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms