RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 SMCR8Q8TEV9 937 aaPredicted RBP14.95□□□□□ -0.02
CSF1R-208ENST00000515239 HMX1Q9NP08 348 aaPredicted RBP14.95□□□□□ -0.02
CSF1R-208ENST00000515239 PFASO15067 1338 aa14.94□□□□□ -0.02
CSF1R-208ENST00000515239 MAST3O60307 1309 aa14.94□□□□□ -0.02
CSF1R-208ENST00000515239 GRM8O00222 908 aa14.94□□□□□ -0.02
CSF1R-208ENST00000515239 HMGCRP04035 888 aa14.94□□□□□ -0.02
CSF1R-208ENST00000515239 CAVIN4Q5BKX8 364 aa14.94□□□□□ -0.02
CSF1R-208ENST00000515239 SCYL3Q8IZE3 742 aa14.94□□□□□ -0.02
CSF1R-208ENST00000515239 ANKRD13CQ8N6S4 541 aa14.94□□□□□ -0.02
CSF1R-208ENST00000515239 FAM161BQ96MY7 647 aa14.94□□□□□ -0.02
CSF1R-208ENST00000515239 FAM198AQ9UFP1 575 aa14.94□□□□□ -0.02
CSF1R-208ENST00000515239 MROH5Q6ZUA9 1318 aa14.93□□□□□ -0.02
CSF1R-208ENST00000515239 DDX60LQ5H9U9 1706 aaKnown RBP14.93□□□□□ -0.02
CSF1R-208ENST00000515239 MDM2Q00987 491 aaPredicted RBP14.93□□□□□ -0.02
CSF1R-208ENST00000515239 ATRNL1Q5VV63 1379 aa14.93□□□□□ -0.02
CSF1R-208ENST00000515239 AK9Q5TCS8 1911 aa14.92□□□□□ -0.02
CSF1R-208ENST00000515239 COL6A1P12109 1028 aa14.92□□□□□ -0.02
CSF1R-208ENST00000515239 MAP3K10Q02779 954 aa14.92□□□□□ -0.02
CSF1R-208ENST00000515239 FAM110CQ1W6H9 321 aa14.92□□□□□ -0.02
CSF1R-208ENST00000515239 KAZALD1Q96I82 304 aa14.92□□□□□ -0.02
CSF1R-208ENST00000515239 PICK1Q9NRD5 415 aa14.92□□□□□ -0.02
CSF1R-208ENST00000515239 DAGLAQ9Y4D2 1042 aa14.92□□□□□ -0.02
CSF1R-208ENST00000515239 COL2A1P02458 1487 aaPredicted RBP14.92□□□□□ -0.02
CSF1R-208ENST00000515239 EYSQ5T1H1 3165 aa14.92□□□□□ -0.02
CSF1R-208ENST00000515239 DIXDC1Q155Q3 683 aa14.91□□□□□ -0.02
CSF1R-208ENST00000515239 LRRC24Q50LG9 513 aa14.91□□□□□ -0.02
CSF1R-208ENST00000515239 TREML2Q5T2D2 321 aa14.91□□□□□ -0.02
CSF1R-208ENST00000515239 MAP3K21Q5TCX8 1036 aa14.91□□□□□ -0.02
CSF1R-208ENST00000515239 VGLL2Q8N8G2 317 aa14.91□□□□□ -0.02
CSF1R-208ENST00000515239 CDX2Q99626 313 aaPredicted RBP14.91□□□□□ -0.02
CSF1R-208ENST00000515239 AGTPBP1Q9UPW5 1226 aa14.91□□□□□ -0.02
CSF1R-208ENST00000515239 TTC28Q96AY4 2481 aa14.91□□□□□ -0.02
CSF1R-208ENST00000515239 PDE8BO95263 885 aa14.9□□□□□ -0.02
CSF1R-208ENST00000515239 SLURP2P0DP57 97 aa14.9□□□□□ -0.02
CSF1R-208ENST00000515239 LRRC26Q2I0M4 334 aa14.9□□□□□ -0.02
CSF1R-208ENST00000515239 TRIB2Q92519 343 aa14.9□□□□□ -0.02
CSF1R-208ENST00000515239 USP40Q9NVE5 1235 aa14.9□□□□□ -0.02
CSF1R-208ENST00000515239 LAMA2P24043 3122 aaKnown RBP14.89□□□□□ -0.03
CSF1R-208ENST00000515239 TRIM75PA6NK02 468 aa14.89□□□□□ -0.03
CSF1R-208ENST00000515239 VAMP4O75379 141 aa14.89□□□□□ -0.03
CSF1R-208ENST00000515239 SH3BP5LQ7L8J4 393 aa14.89□□□□□ -0.03
CSF1R-208ENST00000515239 MAFAQ8NHW3 353 aaPredicted RBP14.89□□□□□ -0.03
CSF1R-208ENST00000515239 WDR66Q8TBY9 1149 aa14.89□□□□□ -0.03
CSF1R-208ENST00000515239 SEMA6BQ9H3T3 888 aa14.89□□□□□ -0.03
CSF1R-208ENST00000515239 C9orf78Q9NZ63 289 aaPredicted RBP14.89□□□□□ -0.03
CSF1R-208ENST00000515239 PTPRFP10586 1907 aa14.89□□□□□ -0.03
CSF1R-208ENST00000515239 PRUNE2Q8WUY3 3088 aa14.88□□□□□ -0.03
CSF1R-208ENST00000515239 CTNND1O60716 968 aaKnown RBP14.88□□□□□ -0.03
CSF1R-208ENST00000515239 COL9A1P20849 921 aa14.88□□□□□ -0.03
CSF1R-208ENST00000515239 METTL24Q5JXM2 366 aa14.88□□□□□ -0.03
CSF1R-208ENST00000515239 ZNF697Q5TEC3 545 aa14.88□□□□□ -0.03
CSF1R-208ENST00000515239 CCDC84Q86UT8 332 aaPredicted RBP14.88□□□□□ -0.03
CSF1R-208ENST00000515239 SUCLG2Q96I99 432 aa14.88□□□□□ -0.03
CSF1R-208ENST00000515239 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.88□□□□□ -0.03
CSF1R-208ENST00000515239 CACNA1FO60840 1977 aa14.87□□□□□ -0.03
CSF1R-208ENST00000515239 FGFR2P21802 821 aa14.87□□□□□ -0.03
CSF1R-208ENST00000515239 PRDX5P30044 214 aa14.87□□□□□ -0.03
CSF1R-208ENST00000515239 GCLCP48506 637 aaPredicted RBP14.87□□□□□ -0.03
CSF1R-208ENST00000515239 RGS3P49796 1198 aa14.87□□□□□ -0.03
CSF1R-208ENST00000515239 LHX8Q68G74 356 aa14.87□□□□□ -0.03
CSF1R-208ENST00000515239 WWC1Q8IX03 1113 aa14.87□□□□□ -0.03
CSF1R-208ENST00000515239 IDI2Q9BXS1 227 aa14.87□□□□□ -0.03
CSF1R-208ENST00000515239 LRRFIP2Q9Y608 721 aaKnown RBP14.87□□□□□ -0.03
CSF1R-208ENST00000515239 KIF16BQ96L93 1317 aa14.87□□□□□ -0.03
CSF1R-208ENST00000515239 PHIPQ8WWQ0 1821 aa14.87□□□□□ -0.03
CSF1R-208ENST00000515239 ENTPD3O75355 529 aa14.86□□□□□ -0.03
CSF1R-208ENST00000515239 ALDH1L1O75891 902 aa14.86□□□□□ -0.03
CSF1R-208ENST00000515239 NBPF7P0C2Y1 421 aaPredicted RBP14.86□□□□□ -0.03
CSF1R-208ENST00000515239 PRKAR2AP13861 404 aaKnown RBP14.86□□□□□ -0.03
CSF1R-208ENST00000515239 PNMA3Q9UL41 463 aa14.86□□□□□ -0.03
CSF1R-208ENST00000515239 PLXNB2O15031 1838 aa14.85□□□□□ -0.03
CSF1R-208ENST00000515239 DDTLA6NHG4 134 aaPredicted RBP14.85□□□□□ -0.03
CSF1R-208ENST00000515239 CYP2B6P20813 491 aa14.85□□□□□ -0.03
CSF1R-208ENST00000515239 CACNB2Q08289 660 aaPredicted RBP14.85□□□□□ -0.03
CSF1R-208ENST00000515239 CCDC27Q2M243 656 aa14.85□□□□□ -0.03
CSF1R-208ENST00000515239 RABL6Q3YEC7 729 aaPredicted RBP14.85□□□□□ -0.03
CSF1R-208ENST00000515239 PROCA1Q8NCQ7 364 aaPredicted RBP14.85□□□□□ -0.03
CSF1R-208ENST00000515239 SYMPKQ92797 1274 aaKnown RBP14.85□□□□□ -0.03
CSF1R-208ENST00000515239 SPINK5Q9NQ38 1064 aaPredicted RBP14.85□□□□□ -0.03
CSF1R-208ENST00000515239 MUC3AQ02505 3323 aa14.84□□□□□ -0.03
CSF1R-208ENST00000515239 IFIT1P09914 478 aaKnown RBP14.84□□□□□ -0.03
CSF1R-208ENST00000515239 XRCC5P13010 732 aaKnown RBP14.84□□□□□ -0.03
CSF1R-208ENST00000515239 SPP2Q13103 211 aa14.84□□□□□ -0.03
CSF1R-208ENST00000515239 DDX10Q13206 875 aaKnown RBP14.84□□□□□ -0.03
CSF1R-208ENST00000515239 KLHDC4Q8TBB5 520 aa14.84□□□□□ -0.03
CSF1R-208ENST00000515239 LBHD1Q9BQE6 289 aaPredicted RBP14.84□□□□□ -0.03
CSF1R-208ENST00000515239 ASCC2Q9H1I8 757 aaPredicted RBP14.84□□□□□ -0.03
CSF1R-208ENST00000515239 BICC1Q9H694 974 aaKnown RBP14.84□□□□□ -0.03
CSF1R-208ENST00000515239 MORF4L1Q9UBU8 362 aa14.84□□□□□ -0.03
CSF1R-208ENST00000515239 CCND3P30281 292 aaPredicted RBP14.83□□□□□ -0.04
CSF1R-208ENST00000515239 PUM3Q15397 648 aaKnown RBP14.83□□□□□ -0.04
CSF1R-208ENST00000515239 ZSCAN29Q8IWY8 852 aaPredicted RBP14.83□□□□□ -0.04
CSF1R-208ENST00000515239 ANKRD44Q8N8A2 993 aa14.83□□□□□ -0.04
CSF1R-208ENST00000515239 MYLIPQ8WY64 445 aa14.83□□□□□ -0.04
CSF1R-208ENST00000515239 TTYH1Q9H313 450 aaPredicted RBP14.83□□□□□ -0.04
CSF1R-208ENST00000515239 RAPGEFL1Q9UHV5 662 aa14.83□□□□□ -0.04
CSF1R-208ENST00000515239 UTYO14607 1347 aa14.83□□□□□ -0.04
CSF1R-208ENST00000515239 IL16Q14005 1332 aa14.83□□□□□ -0.04
CSF1R-208ENST00000515239 CDH23Q9H251 3354 aa14.82□□□□□ -0.04
CSF1R-208ENST00000515239 LDHBP07195 334 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms