RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 FASTKD5Q7L8L6 764 aaKnown RBP18.64■□□□□ 0.57
DDR1-278ENST00000515233 PARK7Q99497 189 aaKnown RBP18.64■□□□□ 0.57
DDR1-278ENST00000515233 ABCF2Q9UG63 623 aa18.64■□□□□ 0.57
DDR1-278ENST00000515233 AKAP2Q9Y2D5 859 aa18.64■□□□□ 0.57
DDR1-278ENST00000515233 AFG3L2Q9Y4W6 797 aa18.64■□□□□ 0.57
DDR1-278ENST00000515233 ZHX2Q9Y6X8 837 aa18.64■□□□□ 0.57
DDR1-278ENST00000515233 RFX7Q2KHR2 1363 aa18.64■□□□□ 0.57
DDR1-278ENST00000515233 A0A0G2JLL6 359 aaPredicted RBP18.63■□□□□ 0.57
DDR1-278ENST00000515233 A0A1B0GUL7 405 aa18.63■□□□□ 0.57
DDR1-278ENST00000515233 GNAI3P08754 354 aa18.63■□□□□ 0.57
DDR1-278ENST00000515233 GRK4P32298 578 aa18.63■□□□□ 0.57
DDR1-278ENST00000515233 RARSP54136 660 aaKnown RBP18.63■□□□□ 0.57
DDR1-278ENST00000515233 PRRT2Q7Z6L0 340 aaPredicted RBP18.63■□□□□ 0.57
DDR1-278ENST00000515233 DZIP1Q86YF9 867 aaKnown RBP18.63■□□□□ 0.57
DDR1-278ENST00000515233 RAET1EQ8TD07 263 aa18.63■□□□□ 0.57
DDR1-278ENST00000515233 SLC45A1Q9Y2W3 748 aa18.63■□□□□ 0.57
DDR1-278ENST00000515233 DOCK2Q92608 1830 aa18.63■□□□□ 0.57
DDR1-278ENST00000515233 DDTLA6NHG4 134 aaPredicted RBP18.62■□□□□ 0.57
DDR1-278ENST00000515233 CTNND1O60716 968 aaKnown RBP18.62■□□□□ 0.57
DDR1-278ENST00000515233 MTFR1Q15390 333 aa18.62■□□□□ 0.57
DDR1-278ENST00000515233 ZSCAN29Q8IWY8 852 aaPredicted RBP18.62■□□□□ 0.57
DDR1-278ENST00000515233 NKX2-3Q8TAU0 364 aa18.62■□□□□ 0.57
DDR1-278ENST00000515233 XAGE2Q96GT9 111 aa18.62■□□□□ 0.57
DDR1-278ENST00000515233 PICK1Q9NRD5 415 aa18.62■□□□□ 0.57
DDR1-278ENST00000515233 MYPNQ86TC9 1320 aa18.61■□□□□ 0.57
DDR1-278ENST00000515233 GPR75-ASB3A0A0A6YYF3 556 aa18.61■□□□□ 0.57
DDR1-278ENST00000515233 SRGAP3O43295 1099 aa18.61■□□□□ 0.57
DDR1-278ENST00000515233 NPM3O75607 178 aaKnown RBP18.61■□□□□ 0.57
DDR1-278ENST00000515233 ECM2O94769 699 aaPredicted RBP18.61■□□□□ 0.57
DDR1-278ENST00000515233 CYP2C8P10632 490 aa18.61■□□□□ 0.57
DDR1-278ENST00000515233 BTDP43251 543 aa18.61■□□□□ 0.57
DDR1-278ENST00000515233 TFCP2Q12800 502 aa18.61■□□□□ 0.57
DDR1-278ENST00000515233 MVPQ14764 893 aaKnown RBP18.61■□□□□ 0.57
DDR1-278ENST00000515233 DDX4Q9NQI0 724 aaKnown RBP18.61■□□□□ 0.57
DDR1-278ENST00000515233 MROH7-TTC4A0A0A0MT08 1334 aa18.6■□□□□ 0.57
DDR1-278ENST00000515233 TBC1D12O60347 775 aa18.6■□□□□ 0.57
DDR1-278ENST00000515233 FCGRTP55899 365 aa18.6■□□□□ 0.57
DDR1-278ENST00000515233 ERICH6Q7L0X2 663 aa18.6■□□□□ 0.57
DDR1-278ENST00000515233 MGAMO43451 1857 aa18.6■□□□□ 0.57
DDR1-278ENST00000515233 MAP4K4O95819 1239 aaPredicted RBP18.59■□□□□ 0.57
DDR1-278ENST00000515233 GJB1P08034 283 aa18.59■□□□□ 0.57
DDR1-278ENST00000515233 GJA8P48165 433 aa18.59■□□□□ 0.57
DDR1-278ENST00000515233 RHBDL3P58872 404 aa18.59■□□□□ 0.57
DDR1-278ENST00000515233 MECOMQ03112 1051 aa18.59■□□□□ 0.57
DDR1-278ENST00000515233 SHISA4Q96DD7 197 aa18.59■□□□□ 0.57
DDR1-278ENST00000515233 COLQQ9Y215 455 aaPredicted RBP18.59■□□□□ 0.57
DDR1-278ENST00000515233 PHIPQ8WWQ0 1821 aa18.58■□□□□ 0.57
DDR1-278ENST00000515233 LDHCP07864 332 aa18.58■□□□□ 0.56
DDR1-278ENST00000515233 FXR1P51114 621 aaKnown RBP eCLIP18.58■□□□□ 0.56
DDR1-278ENST00000515233 UBXN2AP68543 259 aa18.58■□□□□ 0.56
DDR1-278ENST00000515233 PRKCZQ05513 592 aa18.58■□□□□ 0.56
DDR1-278ENST00000515233 PICALMQ13492 652 aa18.58■□□□□ 0.56
DDR1-278ENST00000515233 ZNF384Q8TF68 577 aa18.58■□□□□ 0.56
DDR1-278ENST00000515233 HMG20BQ9P0W2 317 aa18.58■□□□□ 0.56
DDR1-278ENST00000515233 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.58■□□□□ 0.56
DDR1-278ENST00000515233 PTPRFP10586 1907 aa18.58■□□□□ 0.56
DDR1-278ENST00000515233 DOCK1Q14185 1865 aa18.57■□□□□ 0.56
DDR1-278ENST00000515233 SLURP2P0DP57 97 aa18.57■□□□□ 0.56
DDR1-278ENST00000515233 CCL5P13501 91 aa18.57■□□□□ 0.56
DDR1-278ENST00000515233 GADL1Q6ZQY3 521 aa18.57■□□□□ 0.56
DDR1-278ENST00000515233 UBE2Q1Q7Z7E8 422 aa18.57■□□□□ 0.56
DDR1-278ENST00000515233 SLAIN1Q8ND83 568 aa18.57■□□□□ 0.56
DDR1-278ENST00000515233 NEUROD6Q96NK8 337 aa18.57■□□□□ 0.56
DDR1-278ENST00000515233 GABRQQ9UN88 632 aa18.57■□□□□ 0.56
DDR1-278ENST00000515233 H0YGN5 161 aa18.56■□□□□ 0.56
DDR1-278ENST00000515233 IPO8O15397 1037 aaKnown RBP18.56■□□□□ 0.56
DDR1-278ENST00000515233 GSTO1P78417 241 aa18.56■□□□□ 0.56
DDR1-278ENST00000515233 SPATA5Q8NB90 893 aa18.56■□□□□ 0.56
DDR1-278ENST00000515233 NSUN4Q96CB9 384 aaKnown RBP18.56■□□□□ 0.56
DDR1-278ENST00000515233 RNF208Q9H0X6 261 aa18.56■□□□□ 0.56
DDR1-278ENST00000515233 OSBPL5Q9H0X9 879 aaPredicted RBP18.56■□□□□ 0.56
DDR1-278ENST00000515233 BIN2Q9UBW5 565 aaPredicted RBP18.56■□□□□ 0.56
DDR1-278ENST00000515233 AGTPBP1Q9UPW5 1226 aa18.56■□□□□ 0.56
DDR1-278ENST00000515233 CCER2I3L3R5 266 aa18.55■□□□□ 0.56
DDR1-278ENST00000515233 CAPN2P17655 700 aa18.55■□□□□ 0.56
DDR1-278ENST00000515233 ARID4AP29374 1257 aaPredicted RBP18.55■□□□□ 0.56
DDR1-278ENST00000515233 IRF5Q13568 498 aa18.55■□□□□ 0.56
DDR1-278ENST00000515233 PXYLP1Q8TE99 480 aa18.55■□□□□ 0.56
DDR1-278ENST00000515233 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.55■□□□□ 0.56
DDR1-278ENST00000515233 COL2A1P02458 1487 aaPredicted RBP18.54■□□□□ 0.56
DDR1-278ENST00000515233 TRIM75PA6NK02 468 aa18.54■□□□□ 0.56
DDR1-278ENST00000515233 ADCY3O60266 1144 aa18.54■□□□□ 0.56
DDR1-278ENST00000515233 GNAI2P04899 355 aa18.54■□□□□ 0.56
DDR1-278ENST00000515233 GORABQ5T7V8 394 aa18.54■□□□□ 0.56
DDR1-278ENST00000515233 PROCA1Q8NCQ7 364 aaPredicted RBP18.54■□□□□ 0.56
DDR1-278ENST00000515233 DPF3Q92784 378 aa18.54■□□□□ 0.56
DDR1-278ENST00000515233 TBC1D2Q9BYX2 928 aa18.54■□□□□ 0.56
DDR1-278ENST00000515233 TRIM27P14373 513 aa18.53■□□□□ 0.56
DDR1-278ENST00000515233 FLT3LGP49771 235 aa18.53■□□□□ 0.56
DDR1-278ENST00000515233 G3BP1Q13283 466 aaKnown RBP eCLIP18.53■□□□□ 0.56
DDR1-278ENST00000515233 PI16Q6UXB8 463 aa18.53■□□□□ 0.56
DDR1-278ENST00000515233 TBC1D9Q6ZT07 1266 aa18.53■□□□□ 0.56
DDR1-278ENST00000515233 SMCR8Q8TEV9 937 aaPredicted RBP18.53■□□□□ 0.56
DDR1-278ENST00000515233 HTATIP2Q9BUP3 242 aa18.53■□□□□ 0.56
DDR1-278ENST00000515233 PNMA3Q9UL41 463 aa18.53■□□□□ 0.56
DDR1-278ENST00000515233 PNMA6EA0A0J9YXQ4 647 aa18.52■□□□□ 0.56
DDR1-278ENST00000515233 TNPO2O14787 897 aaKnown RBP18.52■□□□□ 0.56
DDR1-278ENST00000515233 SGPL1O95470 568 aa18.52■□□□□ 0.56
DDR1-278ENST00000515233 ATF7IPQ6VMQ6 1270 aa18.52■□□□□ 0.56
DDR1-278ENST00000515233 CCDC84Q86UT8 332 aaPredicted RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms