RNA–Protein interactions for RNA: ENST00000515212.1

HMGN1P9-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene, humanhuman

BASIC

Gene HMGN1P9, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P9-201ENST00000515212 SYNE4Q8N205 404 aa6.5□□□□□ -1.37
HMGN1P9-201ENST00000515212 FNBP4Q8N3X1 1017 aaPredicted RBP6.5□□□□□ -1.37
HMGN1P9-201ENST00000515212 TRIM47Q96LD4 638 aa6.5□□□□□ -1.37
HMGN1P9-201ENST00000515212 FAM227BQ96M60 508 aa6.5□□□□□ -1.37
HMGN1P9-201ENST00000515212 KLF16Q9BXK1 252 aaPredicted RBP6.5□□□□□ -1.37
HMGN1P9-201ENST00000515212 PUS3Q9BZE2 481 aaKnown RBP6.5□□□□□ -1.37
HMGN1P9-201ENST00000515212 AKAP2Q9Y2D5 859 aa6.5□□□□□ -1.37
HMGN1P9-201ENST00000515212 ZNF609O15014 1411 aa6.5□□□□□ -1.37
HMGN1P9-201ENST00000515212 CCDC171Q6TFL3 1326 aa6.5□□□□□ -1.37
HMGN1P9-201ENST00000515212 RREB1Q92766 1687 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 A0A0D9SFI3 127 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 A0A1B0GUL7 405 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 FAM177BA6PVY3 158 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 PDE8AO60658 829 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 CSF1RP07333 972 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 IFIT1P09914 478 aaKnown RBP6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 ITGA6P23229 1130 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 DDIT3P35638 169 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 TIMM10P62072 90 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 PTH1RQ03431 593 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 INTS6LQ5JSJ4 861 aaKnown RBP6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 METTL24Q5JXM2 366 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 CCDC158Q5M9N0 1113 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 TTC39AQ5SRH9 613 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 RNF20Q5VTR2 975 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 PRPF40BQ6NWY9 871 aaKnown RBP6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 TRIM46Q7Z4K8 759 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 SEPT12Q8IYM1 358 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 ZNF34Q8IZ26 560 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 TTLL11Q8NHH1 800 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 IL17RAQ96F46 866 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 EDC3Q96F86 508 aaKnown RBP6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 ZFP42Q96MM3 310 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 PURBQ96QR8 312 aaKnown RBP6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 HAUS7Q99871 368 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 UTP14AQ9BVJ6 771 aaKnown RBP6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 UPF3BQ9BZI7 483 aaKnown RBP6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 GREM2Q9H772 168 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 CNNM1Q9NRU3 951 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 ZNF652Q9Y2D9 606 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 SNX14Q9Y5W7 946 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 CICQ96RK0 1608 aaPredicted RBP6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 UBN2Q6ZU65 1347 aa6.49□□□□□ -1.37
HMGN1P9-201ENST00000515212 COL5A3P25940 1745 aaPredicted RBP6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 RFX7Q2KHR2 1363 aa6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 GOLIM4O00461 696 aa6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 CAMTA2O94983 1202 aa6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 BMP2P12643 396 aa6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 ZKSCAN1P17029 563 aaPredicted RBP6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 MCM4P33991 863 aa6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 RAB3GAP1Q15042 981 aa6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 PARP10Q53GL7 1025 aa6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 C6orf118Q5T5N4 469 aa6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 SUSD4Q5VX71 490 aa6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 LDHAL6AQ6ZMR3 332 aa6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 DDX46Q7L014 1031 aaKnown RBP6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 CCDC125Q86Z20 511 aa6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 LINC00116Q8NCU8 138 aa6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 TNPO1Q92973 898 aaKnown RBP6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 TMX3Q96JJ7 454 aa6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 JAKMIP1Q96N16 626 aaKnown RBP6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 GBP4Q96PP9 640 aa6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 TSEN34Q9BSV6 310 aaKnown RBP6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 CWC22Q9HCG8 908 aaKnown RBP6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 PAG1Q9NWQ8 432 aa6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 NIP7Q9Y221 180 aaKnown RBP eCLIP6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 RBM8AQ9Y5S9 174 aaKnown RBP6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 SH3TC1Q8TE82 1336 aa6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 MYH14Q7Z406 1995 aaKnown RBP6.48□□□□□ -1.37
HMGN1P9-201ENST00000515212 MED23Q9ULK4 1368 aa6.47□□□□□ -1.37
HMGN1P9-201ENST00000515212 THSD7AQ9UPZ6 1657 aa6.47□□□□□ -1.37
HMGN1P9-201ENST00000515212 HCLS1P14317 486 aaPredicted RBP6.47□□□□□ -1.37
HMGN1P9-201ENST00000515212 HSP90B1P14625 803 aaKnown RBP6.47□□□□□ -1.37
HMGN1P9-201ENST00000515212 CASTP20810 708 aaKnown RBP6.47□□□□□ -1.37
HMGN1P9-201ENST00000515212 SSFA2P28290 1259 aa6.47□□□□□ -1.37
HMGN1P9-201ENST00000515212 ADORA1P30542 326 aa6.47□□□□□ -1.37
HMGN1P9-201ENST00000515212 HSPA1LP34931 641 aa6.47□□□□□ -1.37
HMGN1P9-201ENST00000515212 ABL2P42684 1182 aa6.47□□□□□ -1.37
HMGN1P9-201ENST00000515212 NUCB2P80303 420 aa6.47□□□□□ -1.37
HMGN1P9-201ENST00000515212 ATP2B3Q16720 1220 aa6.47□□□□□ -1.37
HMGN1P9-201ENST00000515212 CREB3L3Q68CJ9 461 aa6.47□□□□□ -1.37
HMGN1P9-201ENST00000515212 LINC00528Q8N1L1 170 aa6.47□□□□□ -1.37
HMGN1P9-201ENST00000515212 ZGPATQ8N5A5 531 aaKnown RBP6.47□□□□□ -1.37
HMGN1P9-201ENST00000515212 KBTBD3Q8NAB2 608 aa6.47□□□□□ -1.37
HMGN1P9-201ENST00000515212 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.47□□□□□ -1.37
HMGN1P9-201ENST00000515212 ZNF775Q96BV0 537 aaPredicted RBP6.47□□□□□ -1.37
HMGN1P9-201ENST00000515212 XAGE2Q96GT9 111 aa6.47□□□□□ -1.37
HMGN1P9-201ENST00000515212 BTAF1O14981 1849 aa6.47□□□□□ -1.37
HMGN1P9-201ENST00000515212 AFF2P51816 1311 aa6.47□□□□□ -1.37
HMGN1P9-201ENST00000515212 BCORQ6W2J9 1755 aa6.46□□□□□ -1.37
HMGN1P9-201ENST00000515212 ZNF831Q5JPB2 1677 aa6.46□□□□□ -1.37
HMGN1P9-201ENST00000515212 NHSQ6T4R5 1651 aa6.46□□□□□ -1.37
HMGN1P9-201ENST00000515212 SPEF2Q9C093 1822 aa6.46□□□□□ -1.37
HMGN1P9-201ENST00000515212 GOLGA6L22H0YM25 854 aa6.46□□□□□ -1.38
HMGN1P9-201ENST00000515212 ERVH48-1M5A8F1 160 aa6.46□□□□□ -1.38
HMGN1P9-201ENST00000515212 SLC27A2O14975 620 aa6.46□□□□□ -1.38
HMGN1P9-201ENST00000515212 RAD21O60216 631 aa6.46□□□□□ -1.38
HMGN1P9-201ENST00000515212 SNRPBP14678 240 aaKnown RBP6.46□□□□□ -1.38
HMGN1P9-201ENST00000515212 PTMSP20962 102 aa6.46□□□□□ -1.38
HMGN1P9-201ENST00000515212 PSMA5P28066 241 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms