RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 PCDHGC5Q9Y5F6 944 aa6□□□□□ -1.45
CAST-242ENST00000515063 AK5Q9Y6K8 562 aa6□□□□□ -1.45
CAST-242ENST00000515063 CYP26A1O43174 497 aa5.99□□□□□ -1.45
CAST-242ENST00000515063 RNGTTO60942 597 aaKnown RBP5.99□□□□□ -1.45
CAST-242ENST00000515063 FBXO24O75426 580 aa5.99□□□□□ -1.45
CAST-242ENST00000515063 LMNB1P20700 586 aa5.99□□□□□ -1.45
CAST-242ENST00000515063 XPCQ01831 940 aaPredicted RBP5.99□□□□□ -1.45
CAST-242ENST00000515063 ZC3H12AQ5D1E8 599 aaKnown RBP5.99□□□□□ -1.45
CAST-242ENST00000515063 PCNX4Q63HM2 1172 aa5.99□□□□□ -1.45
CAST-242ENST00000515063 DTX1Q86Y01 620 aa5.99□□□□□ -1.45
CAST-242ENST00000515063 STK35Q8TDR2 534 aa5.99□□□□□ -1.45
CAST-242ENST00000515063 GPBAR1Q8TDU6 330 aa5.99□□□□□ -1.45
CAST-242ENST00000515063 SSU72Q9NP77 194 aaKnown RBP5.99□□□□□ -1.45
CAST-242ENST00000515063 PICK1Q9NRD5 415 aa5.99□□□□□ -1.45
CAST-242ENST00000515063 RSF1Q96T23 1441 aaPredicted RBP5.99□□□□□ -1.45
CAST-242ENST00000515063 RB1CC1Q8TDY2 1594 aa5.98□□□□□ -1.45
CAST-242ENST00000515063 ZBTB7CA1YPR0 619 aa5.98□□□□□ -1.45
CAST-242ENST00000515063 RLBP1P12271 317 aa5.98□□□□□ -1.45
CAST-242ENST00000515063 SPINK2P20155 84 aa5.98□□□□□ -1.45
CAST-242ENST00000515063 PSMD2Q13200 908 aa5.98□□□□□ -1.45
CAST-242ENST00000515063 DNAJC14Q6Y2X3 702 aaPredicted RBP5.98□□□□□ -1.45
CAST-242ENST00000515063 NPAS4Q8IUM7 802 aa5.98□□□□□ -1.45
CAST-242ENST00000515063 RNF214Q8ND24 703 aa5.98□□□□□ -1.45
CAST-242ENST00000515063 DISC1Q9NRI5 854 aa5.98□□□□□ -1.45
CAST-242ENST00000515063 CACNA2D2Q9NY47 1150 aa5.98□□□□□ -1.45
CAST-242ENST00000515063 PCOLCE2Q9UKZ9 415 aa5.98□□□□□ -1.45
CAST-242ENST00000515063 ANGEL1Q9UNK9 670 aaKnown RBP5.98□□□□□ -1.45
CAST-242ENST00000515063 PAGE1O75459 146 aa5.97□□□□□ -1.45
CAST-242ENST00000515063 WNT11O96014 354 aa5.97□□□□□ -1.45
CAST-242ENST00000515063 CELA3AP09093 270 aa5.97□□□□□ -1.45
CAST-242ENST00000515063 HCLS1P14317 486 aaPredicted RBP5.97□□□□□ -1.45
CAST-242ENST00000515063 BMP6P22004 513 aa5.97□□□□□ -1.45
CAST-242ENST00000515063 RPS26P62854 115 aaKnown RBP5.97□□□□□ -1.45
CAST-242ENST00000515063 TTLL4Q14679 1199 aa5.97□□□□□ -1.45
CAST-242ENST00000515063 CCDC85BQ15834 202 aaPredicted RBP5.97□□□□□ -1.45
CAST-242ENST00000515063 OGFOD3Q6PK18 319 aa5.97□□□□□ -1.45
CAST-242ENST00000515063 SEZ6L2Q6UXD5 910 aa5.97□□□□□ -1.45
CAST-242ENST00000515063 KCT2Q8NC54 265 aa5.97□□□□□ -1.45
CAST-242ENST00000515063 GATA6Q92908 595 aa5.97□□□□□ -1.45
CAST-242ENST00000515063 GZF1Q9H116 711 aaPredicted RBP5.97□□□□□ -1.45
CAST-242ENST00000515063 C1GALT1Q9NS00 363 aa5.97□□□□□ -1.45
CAST-242ENST00000515063 PCDHA4Q9UN74 947 aa5.97□□□□□ -1.45
CAST-242ENST00000515063 FAM170BA6NMN3 283 aa5.96□□□□□ -1.46
CAST-242ENST00000515063 FANCGO15287 622 aa5.96□□□□□ -1.46
CAST-242ENST00000515063 ADMP35318 185 aa5.96□□□□□ -1.46
CAST-242ENST00000515063 TTBK2Q6IQ55 1244 aa5.96□□□□□ -1.46
CAST-242ENST00000515063 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.96□□□□□ -1.46
CAST-242ENST00000515063 ELMO3Q96BJ8 720 aa5.96□□□□□ -1.46
CAST-242ENST00000515063 MRS2Q9HD23 443 aa5.96□□□□□ -1.46
CAST-242ENST00000515063 BSDC1Q9NW68 430 aaPredicted RBP5.96□□□□□ -1.46
CAST-242ENST00000515063 PARP2Q9UGN5 583 aa5.96□□□□□ -1.46
CAST-242ENST00000515063 MED26O95402 600 aa5.95□□□□□ -1.46
CAST-242ENST00000515063 ST13P50502 369 aaKnown RBP5.95□□□□□ -1.46
CAST-242ENST00000515063 DAB2P98082 770 aa5.95□□□□□ -1.46
CAST-242ENST00000515063 MSMPQ1L6U9 139 aa5.95□□□□□ -1.46
CAST-242ENST00000515063 ZNF765Q7L2R6 523 aa5.95□□□□□ -1.46
CAST-242ENST00000515063 CDC37L1Q7L3B6 337 aa5.95□□□□□ -1.46
CAST-242ENST00000515063 HDXQ7Z353 690 aa5.95□□□□□ -1.46
CAST-242ENST00000515063 TMC4Q7Z404 712 aa5.95□□□□□ -1.46
CAST-242ENST00000515063 VSIG10LQ86VR7 867 aa5.95□□□□□ -1.46
CAST-242ENST00000515063 GRIN3AQ8TCU5 1115 aa5.95□□□□□ -1.46
CAST-242ENST00000515063 LGR6Q9HBX8 967 aa5.95□□□□□ -1.46
CAST-242ENST00000515063 LRRC4CQ9HCJ2 640 aa5.95□□□□□ -1.46
CAST-242ENST00000515063 DYNC1LI2O43237 492 aaPredicted RBP5.94□□□□□ -1.46
CAST-242ENST00000515063 HOXA10P31260 410 aaPredicted RBP5.94□□□□□ -1.46
CAST-242ENST00000515063 GP2P55259 537 aaKnown RBP5.94□□□□□ -1.46
CAST-242ENST00000515063 ISL2Q96A47 359 aa5.94□□□□□ -1.46
CAST-242ENST00000515063 FBXL18Q96ME1 805 aa5.94□□□□□ -1.46
CAST-242ENST00000515063 SORBS3O60504 671 aa5.93□□□□□ -1.46
CAST-242ENST00000515063 PRNPP04156 253 aa5.93□□□□□ -1.46
CAST-242ENST00000515063 NEFMP07197 916 aa5.93□□□□□ -1.46
CAST-242ENST00000515063 FAM87AP0C7U9 286 aa5.93□□□□□ -1.46
CAST-242ENST00000515063 CDK5R2Q13319 367 aa5.93□□□□□ -1.46
CAST-242ENST00000515063 TAF1CQ15572 869 aaPredicted RBP5.93□□□□□ -1.46
CAST-242ENST00000515063 ARHGAP27Q6ZUM4 889 aa5.93□□□□□ -1.46
CAST-242ENST00000515063 FBXO33Q7Z6M2 555 aa5.93□□□□□ -1.46
CAST-242ENST00000515063 STK11IPQ8N1F8 1099 aa5.93□□□□□ -1.46
CAST-242ENST00000515063 CRELD1Q96HD1 420 aa5.93□□□□□ -1.46
CAST-242ENST00000515063 NOC4LQ9BVI4 516 aaKnown RBP5.93□□□□□ -1.46
CAST-242ENST00000515063 SNCAIPQ9Y6H5 919 aa5.93□□□□□ -1.46
CAST-242ENST00000515063 DCDC2CA8MYV0 355 aa5.92□□□□□ -1.46
CAST-242ENST00000515063 PPM1JQ5JR12 505 aa5.92□□□□□ -1.46
CAST-242ENST00000515063 ZBTB37Q5TC79 503 aa5.92□□□□□ -1.46
CAST-242ENST00000515063 SHISA5Q8N114 240 aa5.92□□□□□ -1.46
CAST-242ENST00000515063 ZNF507Q8TCN5 953 aa5.92□□□□□ -1.46
CAST-242ENST00000515063 MISP3Q96FF7 219 aa5.92□□□□□ -1.46
CAST-242ENST00000515063 MIR1-1HGQ9H1L0 117 aa5.92□□□□□ -1.46
CAST-242ENST00000515063 MKNK2Q9HBH9 465 aa5.92□□□□□ -1.46
CAST-242ENST00000515063 LIG3P49916 1009 aa5.91□□□□□ -1.46
CAST-242ENST00000515063 IRAK1P51617 712 aa5.91□□□□□ -1.46
CAST-242ENST00000515063 ZNF326Q5BKZ1 582 aaKnown RBP5.91□□□□□ -1.46
CAST-242ENST00000515063 MPRIPQ6WCQ1 1025 aa5.91□□□□□ -1.46
CAST-242ENST00000515063 AGMOQ6ZNB7 445 aa5.91□□□□□ -1.46
CAST-242ENST00000515063 C12orf40Q86WS4 652 aa5.91□□□□□ -1.46
CAST-242ENST00000515063 AGBL5Q8NDL9 886 aa5.91□□□□□ -1.46
CAST-242ENST00000515063 GAL3ST3Q96A11 431 aa5.91□□□□□ -1.46
CAST-242ENST00000515063 VTI1BQ9UEU0 232 aa5.91□□□□□ -1.46
CAST-242ENST00000515063 CCDC39Q9UFE4 941 aa5.91□□□□□ -1.46
CAST-242ENST00000515063 GTF2IRD1Q9UHL9 959 aa5.91□□□□□ -1.46
CAST-242ENST00000515063 CSADQ9Y600 493 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms