RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 ZAP70P43403 619 aa29.97■■■□□ 2.39
SNF8-213ENST00000514929 RHBDL3P58872 404 aa29.97■■■□□ 2.39
SNF8-213ENST00000514929 NAA16Q6N069 864 aaPredicted RBP29.97■■■□□ 2.39
SNF8-213ENST00000514929 SIRT2Q8IXJ6 389 aa29.97■■■□□ 2.39
SNF8-213ENST00000514929 RHPN1Q8TCX5 695 aa29.97■■■□□ 2.39
SNF8-213ENST00000514929 MS4A4AQ96JQ5 239 aa29.97■■■□□ 2.39
SNF8-213ENST00000514929 NOL10Q9BSC4 688 aaKnown RBP29.97■■■□□ 2.39
SNF8-213ENST00000514929 R3HDMLQ9H3Y0 253 aa29.97■■■□□ 2.39
SNF8-213ENST00000514929 IL1RAPL2Q9NP60 686 aa29.97■■■□□ 2.39
SNF8-213ENST00000514929 DDX4Q9NQI0 724 aaKnown RBP29.97■■■□□ 2.39
SNF8-213ENST00000514929 APBB1O00213 710 aa29.96■■■□□ 2.39
SNF8-213ENST00000514929 MAP4K4O95819 1239 aaPredicted RBP29.96■■■□□ 2.39
SNF8-213ENST00000514929 CTU1Q7Z7A3 348 aaKnown RBP29.96■■■□□ 2.39
SNF8-213ENST00000514929 ZNF112Q9UJU3 913 aa29.96■■■□□ 2.39
SNF8-213ENST00000514929 DOCK2Q92608 1830 aa29.95■■■□□ 2.39
SNF8-213ENST00000514929 CCL15-CCL14A0A0B4J2E2 113 aa29.95■■■□□ 2.39
SNF8-213ENST00000514929 CCL15Q16663 113 aa29.95■■■□□ 2.39
SNF8-213ENST00000514929 KIF1BPQ96EK5 621 aa29.95■■■□□ 2.39
SNF8-213ENST00000514929 PTPN18Q99952 460 aa29.95■■■□□ 2.39
SNF8-213ENST00000514929 MAST2Q6P0Q8 1798 aa29.95■■■□□ 2.38
SNF8-213ENST00000514929 CCDC85CA6NKD9 419 aa29.94■■■□□ 2.38
SNF8-213ENST00000514929 FKTNO75072 461 aa29.94■■■□□ 2.38
SNF8-213ENST00000514929 SH3BP5LQ7L8J4 393 aa29.94■■■□□ 2.38
SNF8-213ENST00000514929 BRI3BPQ8WY22 251 aa29.94■■■□□ 2.38
SNF8-213ENST00000514929 DDTLA6NHG4 134 aaPredicted RBP29.93■■■□□ 2.38
SNF8-213ENST00000514929 PPIL2Q13356 520 aa29.93■■■□□ 2.38
SNF8-213ENST00000514929 CLASRPQ8N2M8 674 aaKnown RBP29.93■■■□□ 2.38
SNF8-213ENST00000514929 PIH1D3Q9NQM4 214 aaKnown RBP29.93■■■□□ 2.38
SNF8-213ENST00000514929 ATRNL1Q5VV63 1379 aa29.92■■■□□ 2.38
SNF8-213ENST00000514929 NPM3O75607 178 aaKnown RBP29.92■■■□□ 2.38
SNF8-213ENST00000514929 BAG3O95817 575 aa29.92■■■□□ 2.38
SNF8-213ENST00000514929 PPATQ06203 517 aa29.92■■■□□ 2.38
SNF8-213ENST00000514929 TEX11Q8IYF3 940 aa29.92■■■□□ 2.38
SNF8-213ENST00000514929 BCL11AQ9H165 835 aa29.92■■■□□ 2.38
SNF8-213ENST00000514929 IRF6O14896 467 aa29.91■■■□□ 2.38
SNF8-213ENST00000514929 IGSF3O75054 1194 aa29.91■■■□□ 2.38
SNF8-213ENST00000514929 RAB11FIP3O75154 756 aa29.91■■■□□ 2.38
SNF8-213ENST00000514929 CRHR2Q13324 411 aa29.91■■■□□ 2.38
SNF8-213ENST00000514929 SNAPC2Q13487 334 aa29.91■■■□□ 2.38
SNF8-213ENST00000514929 AATFQ9NY61 560 aaKnown RBP eCLIP29.91■■■□□ 2.388e-6■■■■□ 21.3
SNF8-213ENST00000514929 CETPP11597 493 aa29.9■■■□□ 2.38
SNF8-213ENST00000514929 NOL9Q5SY16 702 aaKnown RBP29.9■■■□□ 2.38
SNF8-213ENST00000514929 SH3RF3Q8TEJ3 882 aaPredicted RBP29.9■■■□□ 2.38
SNF8-213ENST00000514929 IDH1O75874 414 aaKnown RBP29.89■■■□□ 2.38
SNF8-213ENST00000514929 NDUFB9Q9Y6M9 179 aa29.89■■■□□ 2.38
SNF8-213ENST00000514929 IFIT2P09913 472 aaKnown RBP29.88■■■□□ 2.37
SNF8-213ENST00000514929 PLCG2P16885 1265 aa29.88■■■□□ 2.37
SNF8-213ENST00000514929 OSBPL5Q9H0X9 879 aaPredicted RBP29.88■■■□□ 2.37
SNF8-213ENST00000514929 MYO5AQ9Y4I1 1855 aaKnown RBP29.88■■■□□ 2.37
SNF8-213ENST00000514929 PHF20L1A8MW92 1017 aa29.87■■■□□ 2.37
SNF8-213ENST00000514929 PPP4CP60510 307 aa29.87■■■□□ 2.37
SNF8-213ENST00000514929 MAP3K10Q02779 954 aa29.87■■■□□ 2.37
SNF8-213ENST00000514929 ADGRA1Q86SQ6 560 aa29.87■■■□□ 2.37
SNF8-213ENST00000514929 FAM43AQ8N2R8 423 aa29.87■■■□□ 2.37
SNF8-213ENST00000514929 YTHDC1Q96MU7 727 aaKnown RBP29.87■■■□□ 2.37
SNF8-213ENST00000514929 CYP7A1P22680 504 aa29.86■■■□□ 2.37
SNF8-213ENST00000514929 TAF1CQ15572 869 aaPredicted RBP29.86■■■□□ 2.37
SNF8-213ENST00000514929 PKN2Q16513 984 aaKnown RBP29.86■■■□□ 2.37
SNF8-213ENST00000514929 SCYL3Q8IZE3 742 aa29.86■■■□□ 2.37
SNF8-213ENST00000514929 PICK1Q9NRD5 415 aa29.86■■■□□ 2.37
SNF8-213ENST00000514929 SLURP2P0DP57 97 aa29.85■■■□□ 2.37
SNF8-213ENST00000514929 ANTXR1Q9H6X2 564 aa29.85■■■□□ 2.37
SNF8-213ENST00000514929 ZFYVE28Q9HCC9 887 aa29.85■■■□□ 2.37
SNF8-213ENST00000514929 COL2A1P02458 1487 aaPredicted RBP29.85■■■□□ 2.37
SNF8-213ENST00000514929 MAP3K12Q12852 859 aa29.84■■■□□ 2.37
SNF8-213ENST00000514929 TBC1D12O60347 775 aa29.83■■■□□ 2.37
SNF8-213ENST00000514929 MAGEB6Q8N7X4 407 aa29.83■■■□□ 2.37
SNF8-213ENST00000514929 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.83■■■□□ 2.37
SNF8-213ENST00000514929 KCNH4Q9UQ05 1017 aa29.83■■■□□ 2.37
SNF8-213ENST00000514929 BTBD19C9JJ37 291 aa29.82■■■□□ 2.36
SNF8-213ENST00000514929 CTNND1O60716 968 aaKnown RBP29.82■■■□□ 2.36
SNF8-213ENST00000514929 TGFBRAP1Q8WUH2 860 aa29.82■■■□□ 2.36
SNF8-213ENST00000514929 ERO1AQ96HE7 468 aa29.82■■■□□ 2.36
SNF8-213ENST00000514929 ZCCHC17Q9NP64 241 aaKnown RBP29.82■■■□□ 2.36
SNF8-213ENST00000514929 FAM196BA6NMK8 535 aa29.81■■■□□ 2.36
SNF8-213ENST00000514929 TTF1Q15361 905 aaPredicted RBP29.81■■■□□ 2.36
SNF8-213ENST00000514929 MAPKAPK5Q8IW41 473 aa29.81■■■□□ 2.36
SNF8-213ENST00000514929 ZHX2Q9Y6X8 837 aa29.81■■■□□ 2.36
SNF8-213ENST00000514929 DYNLL1P63167 89 aaKnown RBP29.8■■■□□ 2.36
SNF8-213ENST00000514929 SP3Q02447 781 aa29.8■■■□□ 2.36
SNF8-213ENST00000514929 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.8■■■□□ 2.36
SNF8-213ENST00000514929 DNAJC2Q99543 621 aaKnown RBP29.8■■■□□ 2.36
SNF8-213ENST00000514929 LRRCC1Q9C099 1032 aa29.8■■■□□ 2.36
SNF8-213ENST00000514929 DHX36Q9H2U1 1008 aaKnown RBP29.8■■■□□ 2.36
SNF8-213ENST00000514929 FLT1P17948 1338 aa29.79■■■□□ 2.36
SNF8-213ENST00000514929 PTPRAP18433 802 aa29.79■■■□□ 2.36
SNF8-213ENST00000514929 TMED8Q6PL24 325 aaPredicted RBP29.79■■■□□ 2.36
SNF8-213ENST00000514929 MIGA1Q8NAN2 632 aa29.79■■■□□ 2.36
SNF8-213ENST00000514929 TRIM17Q9Y577 477 aa29.79■■■□□ 2.36
SNF8-213ENST00000514929 DOCK1Q14185 1865 aa29.78■■■□□ 2.36
SNF8-213ENST00000514929 CXCL11O14625 94 aa29.78■■■□□ 2.36
SNF8-213ENST00000514929 RRP1P56182 461 aaKnown RBP29.78■■■□□ 2.36
SNF8-213ENST00000514929 FBXO46Q6PJ61 603 aaPredicted RBP29.78■■■□□ 2.36
SNF8-213ENST00000514929 CERS3Q8IU89 383 aa29.78■■■□□ 2.36
SNF8-213ENST00000514929 CD99L2Q8TCZ2 262 aa29.78■■■□□ 2.36
SNF8-213ENST00000514929 PI4KBQ9UBF8 816 aa29.78■■■□□ 2.36
SNF8-213ENST00000514929 HPS5Q9UPZ3 1129 aa29.78■■■□□ 2.36
SNF8-213ENST00000514929 ANKRD23Q86SG2 305 aa29.77■■■□□ 2.36
SNF8-213ENST00000514929 HERC5Q9UII4 1024 aaKnown RBP29.77■■■□□ 2.36
SNF8-213ENST00000514929 CDK5RAP2Q96SN8 1893 aa29.76■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms