RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 CCL5P13501 91 aa28.43■■■□□ 2.14
SMAD1-214ENST00000514831 RGS3P49796 1198 aa28.43■■■□□ 2.14
SMAD1-214ENST00000514831 PRKCZQ05513 592 aa28.43■■■□□ 2.14
SMAD1-214ENST00000514831 PRRT2Q7Z6L0 340 aaPredicted RBP28.43■■■□□ 2.14
SMAD1-214ENST00000514831 UBE2Q1Q7Z7E8 422 aa28.43■■■□□ 2.14
SMAD1-214ENST00000514831 PICK1Q9NRD5 415 aa28.43■■■□□ 2.14
SMAD1-214ENST00000514831 FASTKD5Q7L8L6 764 aaKnown RBP28.42■■■□□ 2.14
SMAD1-214ENST00000514831 SLAIN1Q8ND83 568 aa28.42■■■□□ 2.14
SMAD1-214ENST00000514831 PDS5AQ29RF7 1337 aaKnown RBP28.42■■■□□ 2.14
SMAD1-214ENST00000514831 PTPRAP18433 802 aa28.41■■■□□ 2.14
SMAD1-214ENST00000514831 UBXN2AP68543 259 aa28.41■■■□□ 2.14
SMAD1-214ENST00000514831 CCDC102BQ68D86 513 aa28.41■■■□□ 2.14
SMAD1-214ENST00000514831 SLC45A1Q9Y2W3 748 aa28.41■■■□□ 2.14
SMAD1-214ENST00000514831 ZHX2Q9Y6X8 837 aa28.41■■■□□ 2.14
SMAD1-214ENST00000514831 MAP3K10Q02779 954 aa28.4■■■□□ 2.14
SMAD1-214ENST00000514831 SH3BP5LQ7L8J4 393 aa28.4■■■□□ 2.14
SMAD1-214ENST00000514831 RNF208Q9H0X6 261 aa28.4■■■□□ 2.14
SMAD1-214ENST00000514831 COPRSQ9NQ92 184 aa28.4■■■□□ 2.14
SMAD1-214ENST00000514831 AFG3L2Q9Y4W6 797 aa28.4■■■□□ 2.14
SMAD1-214ENST00000514831 ADORA1P30542 326 aa28.39■■■□□ 2.14
SMAD1-214ENST00000514831 RASGRF1Q13972 1273 aa28.39■■■□□ 2.14
SMAD1-214ENST00000514831 CHRDL2Q6WN34 429 aa28.39■■■□□ 2.14
SMAD1-214ENST00000514831 DZIP1Q86YF9 867 aaKnown RBP28.39■■■□□ 2.14
SMAD1-214ENST00000514831 PA2G4Q9UQ80 394 aaKnown RBP28.39■■■□□ 2.14
SMAD1-214ENST00000514831 HDAC5Q9UQL6 1122 aa28.39■■■□□ 2.14
SMAD1-214ENST00000514831 LRRFIP2Q9Y608 721 aaKnown RBP28.39■■■□□ 2.14
SMAD1-214ENST00000514831 ZSCAN29Q8IWY8 852 aaPredicted RBP28.38■■■□□ 2.13
SMAD1-214ENST00000514831 SLF2Q8IX21 1173 aa28.38■■■□□ 2.13
SMAD1-214ENST00000514831 DPF3Q92784 378 aa28.38■■■□□ 2.13
SMAD1-214ENST00000514831 HTATIP2Q9BUP3 242 aa28.38■■■□□ 2.13
SMAD1-214ENST00000514831 BIN2Q9UBW5 565 aaPredicted RBP28.38■■■□□ 2.13
SMAD1-214ENST00000514831 GABRQQ9UN88 632 aa28.38■■■□□ 2.13
SMAD1-214ENST00000514831 FAM163AQ96GL9 167 aaPredicted RBP28.37■■■□□ 2.13
SMAD1-214ENST00000514831 DDTLA6NHG4 134 aaPredicted RBP28.36■■■□□ 2.13
SMAD1-214ENST00000514831 CTNND1O60716 968 aaKnown RBP28.36■■■□□ 2.13
SMAD1-214ENST00000514831 GADL1Q6ZQY3 521 aa28.36■■■□□ 2.13
SMAD1-214ENST00000514831 U2AF1L4Q8WU68 220 aaKnown RBP28.36■■■□□ 2.13
SMAD1-214ENST00000514831 DDX4Q9NQI0 724 aaKnown RBP28.36■■■□□ 2.13
SMAD1-214ENST00000514831 LOC285556D6RIA3 1793 aa28.36■■■□□ 2.13
SMAD1-214ENST00000514831 CT47B1P0C2W7 299 aaPredicted RBP28.35■■■□□ 2.13
SMAD1-214ENST00000514831 BTDP43251 543 aa28.35■■■□□ 2.13
SMAD1-214ENST00000514831 CDCA7LQ96GN5 454 aa28.35■■■□□ 2.13
SMAD1-214ENST00000514831 ABCF2Q9UG63 623 aa28.35■■■□□ 2.13
SMAD1-214ENST00000514831 MROH7-TTC4A0A0A0MT08 1334 aa28.35■■■□□ 2.13
SMAD1-214ENST00000514831 ATAD5Q96QE3 1844 aa28.34■■■□□ 2.13
SMAD1-214ENST00000514831 ADCY3O60266 1144 aa28.34■■■□□ 2.13
SMAD1-214ENST00000514831 SPTY2D1Q68D10 685 aaPredicted RBP28.34■■■□□ 2.13
SMAD1-214ENST00000514831 TRMT2AQ8IZ69 625 aaKnown RBP28.34■■■□□ 2.13
SMAD1-214ENST00000514831 API5Q9BZZ5 524 aaKnown RBP28.34■■■□□ 2.13
SMAD1-214ENST00000514831 UNC93B1Q9H1C4 597 aa28.34■■■□□ 2.13
SMAD1-214ENST00000514831 RBM27Q9P2N5 1060 aaKnown RBP28.34■■■□□ 2.13
SMAD1-214ENST00000514831 NOB1Q9ULX3 412 aaKnown RBP28.34■■■□□ 2.13
SMAD1-214ENST00000514831 FARP2O94887 1054 aaPredicted RBP28.33■■■□□ 2.13
SMAD1-214ENST00000514831 FLT3LGP49771 235 aa28.33■■■□□ 2.13
SMAD1-214ENST00000514831 PICALMQ13492 652 aa28.33■■■□□ 2.13
SMAD1-214ENST00000514831 SMCR8Q8TEV9 937 aaPredicted RBP28.33■■■□□ 2.13
SMAD1-214ENST00000514831 MEIS3Q99687 375 aa28.33■■■□□ 2.13
SMAD1-214ENST00000514831 TNPO2O14787 897 aaKnown RBP28.32■■■□□ 2.12
SMAD1-214ENST00000514831 SLURP2P0DP57 97 aa28.32■■■□□ 2.12
SMAD1-214ENST00000514831 IRF5Q13568 498 aa28.32■■■□□ 2.12
SMAD1-214ENST00000514831 PXYLP1Q8TE99 480 aa28.32■■■□□ 2.12
SMAD1-214ENST00000514831 AGTPBP1Q9UPW5 1226 aa28.32■■■□□ 2.12
SMAD1-214ENST00000514831 COL2A1P02458 1487 aaPredicted RBP28.32■■■□□ 2.12
SMAD1-214ENST00000514831 DOCK3Q8IZD9 2030 aa28.31■■■□□ 2.12
SMAD1-214ENST00000514831 A0A1B0GUL7 405 aa28.31■■■□□ 2.12
SMAD1-214ENST00000514831 TRIM75PA6NK02 468 aa28.31■■■□□ 2.12
SMAD1-214ENST00000514831 SGPL1O95470 568 aa28.31■■■□□ 2.12
SMAD1-214ENST00000514831 TIMM10P62072 90 aa28.31■■■□□ 2.12
SMAD1-214ENST00000514831 GPR75-ASB3A0A0A6YYF3 556 aa28.3■■■□□ 2.12
SMAD1-214ENST00000514831 TBC1D12O60347 775 aa28.3■■■□□ 2.12
SMAD1-214ENST00000514831 NPM3O75607 178 aaKnown RBP28.3■■■□□ 2.12
SMAD1-214ENST00000514831 INHAP05111 366 aa28.3■■■□□ 2.12
SMAD1-214ENST00000514831 ELNP15502 786 aa28.3■■■□□ 2.12
SMAD1-214ENST00000514831 CAPN2P17655 700 aa28.3■■■□□ 2.12
SMAD1-214ENST00000514831 RHBDL3P58872 404 aa28.3■■■□□ 2.12
SMAD1-214ENST00000514831 MVPQ14764 893 aaKnown RBP28.3■■■□□ 2.12
SMAD1-214ENST00000514831 PRO3102Q9H379 93 aa28.3■■■□□ 2.12
SMAD1-214ENST00000514831 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.3■■■□□ 2.12
SMAD1-214ENST00000514831 AKAP2Q9Y2D5 859 aa28.3■■■□□ 2.12
SMAD1-214ENST00000514831 NR2E3Q9Y5X4 410 aa28.3■■■□□ 2.12
SMAD1-214ENST00000514831 MECOMQ03112 1051 aa28.29■■■□□ 2.12
SMAD1-214ENST00000514831 ZNF384Q8TF68 577 aa28.29■■■□□ 2.12
SMAD1-214ENST00000514831 XAGE2Q96GT9 111 aa28.29■■■□□ 2.12
SMAD1-214ENST00000514831 ERICH6Q7L0X2 663 aa28.28■■■□□ 2.12
SMAD1-214ENST00000514831 CCDC84Q86UT8 332 aaPredicted RBP28.28■■■□□ 2.12
SMAD1-214ENST00000514831 PNMA3Q9UL41 463 aa28.28■■■□□ 2.12
SMAD1-214ENST00000514831 RANBP2P49792 3224 aaKnown RBP28.27■■■□□ 2.12
SMAD1-214ENST00000514831 TFCP2Q12800 502 aa28.27■■■□□ 2.12
SMAD1-214ENST00000514831 MTX1Q13505 466 aa28.27■■■□□ 2.12
SMAD1-214ENST00000514831 FAM110CQ1W6H9 321 aa28.27■■■□□ 2.12
SMAD1-214ENST00000514831 PROCA1Q8NCQ7 364 aaPredicted RBP28.27■■■□□ 2.12
SMAD1-214ENST00000514831 PAK6Q9NQU5 681 aaPredicted RBP28.27■■■□□ 2.12
SMAD1-214ENST00000514831 SZT2Q5T011 3432 aa28.27■■■□□ 2.12
SMAD1-214ENST00000514831 ALPK3Q96L96 1907 aa28.26■■■□□ 2.11
SMAD1-214ENST00000514831 ZBTB7BO15156 539 aaPredicted RBP28.26■■■□□ 2.11
SMAD1-214ENST00000514831 MAP4K4O95819 1239 aaPredicted RBP28.26■■■□□ 2.11
SMAD1-214ENST00000514831 TREML2Q5T2D2 321 aa28.26■■■□□ 2.11
SMAD1-214ENST00000514831 ANKRD13CQ8N6S4 541 aa28.26■■■□□ 2.11
SMAD1-214ENST00000514831 OSBPL5Q9H0X9 879 aaPredicted RBP28.26■■■□□ 2.11
SMAD1-214ENST00000514831 MAST2Q6P0Q8 1798 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms