RNA–Protein interactions for RNA: ENST00000514488.1

MATR3-224, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-224ENST00000514488 TMC4Q7Z404 712 aa11.23□□□□□ -0.61
MATR3-224ENST00000514488 TBC1D16Q8TBP0 767 aa11.23□□□□□ -0.61
MATR3-224ENST00000514488 XAGE3Q8WTP9 111 aa11.23□□□□□ -0.61
MATR3-224ENST00000514488 LRRN4Q8WUT4 740 aa11.23□□□□□ -0.61
MATR3-224ENST00000514488 AP1G2O75843 785 aa11.22□□□□□ -0.61
MATR3-224ENST00000514488 VIL1P09327 827 aaKnown RBP11.22□□□□□ -0.61
MATR3-224ENST00000514488 RANBP2P49792 3224 aaKnown RBP11.22□□□□□ -0.61
MATR3-224ENST00000514488 TCIRG1Q13488 830 aa11.22□□□□□ -0.61
MATR3-224ENST00000514488 HSP90AB3PQ58FF7 597 aa11.22□□□□□ -0.61
MATR3-224ENST00000514488 C4orf48Q5BLP8 95 aa11.22□□□□□ -0.61
MATR3-224ENST00000514488 SH3RF1Q7Z6J0 888 aa11.22□□□□□ -0.61
MATR3-224ENST00000514488 EYA3Q99504 573 aa11.22□□□□□ -0.61
MATR3-224ENST00000514488 TSPYL4Q9UJ04 414 aa11.22□□□□□ -0.61
MATR3-224ENST00000514488 ZNF646O15015 1829 aaPredicted RBP11.21□□□□□ -0.61
MATR3-224ENST00000514488 SPEF2Q9C093 1822 aa11.21□□□□□ -0.61
MATR3-224ENST00000514488 FKTNO75072 461 aa11.21□□□□□ -0.61
MATR3-224ENST00000514488 RFC5P40937 340 aa11.21□□□□□ -0.61
MATR3-224ENST00000514488 FXR1P51114 621 aaKnown RBP eCLIP11.21□□□□□ -0.61
MATR3-224ENST00000514488 ZNF280AP59817 542 aaPredicted RBP11.21□□□□□ -0.61
MATR3-224ENST00000514488 FKBP1BP68106 108 aa11.21□□□□□ -0.61
MATR3-224ENST00000514488 NFE2L2Q16236 605 aa11.21□□□□□ -0.61
MATR3-224ENST00000514488 SH3BP5LQ7L8J4 393 aa11.21□□□□□ -0.61
MATR3-224ENST00000514488 FAM89AQ96GI7 184 aa11.21□□□□□ -0.61
MATR3-224ENST00000514488 CDK15Q96Q40 435 aa11.21□□□□□ -0.61
MATR3-224ENST00000514488 CUL9Q8IWT3 2517 aa11.21□□□□□ -0.61
MATR3-224ENST00000514488 TM4SF4P48230 202 aa11.2□□□□□ -0.62
MATR3-224ENST00000514488 C1QTNF2Q9BXJ5 285 aa11.2□□□□□ -0.62
MATR3-224ENST00000514488 ZC3H12CQ9C0D7 883 aaKnown RBP11.2□□□□□ -0.62
MATR3-224ENST00000514488 MYOZ2Q9NPC6 264 aa11.2□□□□□ -0.62
MATR3-224ENST00000514488 ATP13A2Q9NQ11 1180 aa11.2□□□□□ -0.62
MATR3-224ENST00000514488 ATP5J2-PTCD1G3V325 749 aa11.19□□□□□ -0.62
MATR3-224ENST00000514488 UFL1O94874 794 aa11.19□□□□□ -0.62
MATR3-224ENST00000514488 ADH1CP00326 375 aa11.19□□□□□ -0.62
MATR3-224ENST00000514488 NEFMP07197 916 aa11.19□□□□□ -0.62
MATR3-224ENST00000514488 USP17L8P0C7I0 530 aa11.19□□□□□ -0.62
MATR3-224ENST00000514488 PRKG1Q13976 671 aa11.19□□□□□ -0.62
MATR3-224ENST00000514488 SF3B3Q15393 1217 aaKnown RBP11.19□□□□□ -0.62
MATR3-224ENST00000514488 PLEKHF1Q96S99 279 aa11.19□□□□□ -0.62
MATR3-224ENST00000514488 GMPR2Q9P2T1 348 aaKnown RBP11.19□□□□□ -0.62
MATR3-224ENST00000514488 FKBPLQ9UIM3 349 aa11.19□□□□□ -0.62
MATR3-224ENST00000514488 COL6A3P12111 3177 aa11.19□□□□□ -0.62
MATR3-224ENST00000514488 PITPNM2Q9BZ72 1349 aa11.18□□□□□ -0.62
MATR3-224ENST00000514488 RPS8P62241 208 aaKnown RBP11.18□□□□□ -0.62
MATR3-224ENST00000514488 NNTQ13423 1086 aa11.18□□□□□ -0.62
MATR3-224ENST00000514488 KRT24Q2M2I5 525 aa11.18□□□□□ -0.62
MATR3-224ENST00000514488 NBPF9Q3BBW0 867 aa11.18□□□□□ -0.62
MATR3-224ENST00000514488 NOM1Q5C9Z4 860 aaKnown RBP11.18□□□□□ -0.62
MATR3-224ENST00000514488 GMLQ99445 158 aa11.18□□□□□ -0.62
MATR3-224ENST00000514488 SEC31BQ9NQW1 1179 aa11.18□□□□□ -0.62
MATR3-224ENST00000514488 TRIM17Q9Y577 477 aa11.18□□□□□ -0.62
MATR3-224ENST00000514488 ZNF609O15014 1411 aa11.18□□□□□ -0.62
MATR3-224ENST00000514488 EN2P19622 333 aaPredicted RBP11.17□□□□□ -0.62
MATR3-224ENST00000514488 PTPN12Q05209 780 aaKnown RBP11.17□□□□□ -0.62
MATR3-224ENST00000514488 SREBF2Q12772 1141 aa11.17□□□□□ -0.62
MATR3-224ENST00000514488 NR6A1Q15406 480 aa11.17□□□□□ -0.62
MATR3-224ENST00000514488 PDXDC2PQ6P474 469 aa11.17□□□□□ -0.62
MATR3-224ENST00000514488 AGBL3Q8NEM8 1001 aa11.17□□□□□ -0.62
MATR3-224ENST00000514488 MXD3Q9BW11 206 aa11.17□□□□□ -0.62
MATR3-224ENST00000514488 ANKIB1Q9P2G1 1089 aa11.17□□□□□ -0.62
MATR3-224ENST00000514488 FZD1Q9UP38 647 aa11.17□□□□□ -0.62
MATR3-224ENST00000514488 TMEM259Q4ZIN3 620 aa11.16□□□□□ -0.62
MATR3-224ENST00000514488 OTOP1Q7RTM1 612 aa11.16□□□□□ -0.62
MATR3-224ENST00000514488 TRMT44Q8IYL2 757 aaKnown RBP11.16□□□□□ -0.62
MATR3-224ENST00000514488 ISCA1Q9BUE6 129 aa11.16□□□□□ -0.62
MATR3-224ENST00000514488 CHPF2Q9P2E5 772 aa11.16□□□□□ -0.62
MATR3-224ENST00000514488 GGA1Q9UJY5 639 aa11.16□□□□□ -0.62
MATR3-224ENST00000514488 LAMB1P07942 1786 aa11.16□□□□□ -0.62
MATR3-224ENST00000514488 WTIPA6NIX2 430 aaPredicted RBP11.15□□□□□ -0.62
MATR3-224ENST00000514488 IRS4O14654 1257 aaPredicted RBP11.15□□□□□ -0.62
MATR3-224ENST00000514488 CAPN5O15484 640 aaPredicted RBP11.15□□□□□ -0.62
MATR3-224ENST00000514488 SASH1O94885 1247 aa11.15□□□□□ -0.62
MATR3-224ENST00000514488 ARID5BQ14865 1188 aa11.15□□□□□ -0.62
MATR3-224ENST00000514488 CCDC85AQ96PX6 553 aaPredicted RBP11.15□□□□□ -0.62
MATR3-224ENST00000514488 CFHR5Q9BXR6 569 aa11.15□□□□□ -0.62
MATR3-224ENST00000514488 SENP2Q9HC62 589 aa11.15□□□□□ -0.62
MATR3-224ENST00000514488 PODXL2Q9NZ53 605 aa11.15□□□□□ -0.62
MATR3-224ENST00000514488 MAP4K5Q9Y4K4 846 aa11.15□□□□□ -0.62
MATR3-224ENST00000514488 MAPK8IP3Q9UPT6 1336 aa11.14□□□□□ -0.63
MATR3-224ENST00000514488 MAGEB6P1A0A0J9YX57 407 aa11.14□□□□□ -0.63
MATR3-224ENST00000514488 USP17L3A6NCW0 530 aa11.14□□□□□ -0.63
MATR3-224ENST00000514488 USP17L4A6NCW7 530 aa11.14□□□□□ -0.63
MATR3-224ENST00000514488 NF2P35240 595 aa11.14□□□□□ -0.63
MATR3-224ENST00000514488 NR5A1Q13285 461 aa11.14□□□□□ -0.63
MATR3-224ENST00000514488 INTS3Q68E01 1043 aaKnown RBP11.14□□□□□ -0.63
MATR3-224ENST00000514488 USP17L1Q7RTZ2 530 aa11.14□□□□□ -0.63
MATR3-224ENST00000514488 PLBD2Q8NHP8 589 aa11.14□□□□□ -0.63
MATR3-224ENST00000514488 CD99L2Q8TCZ2 262 aa11.14□□□□□ -0.63
MATR3-224ENST00000514488 MYH3P11055 1940 aa11.13□□□□□ -0.63
MATR3-224ENST00000514488 WNT10BO00744 389 aa11.13□□□□□ -0.63
MATR3-224ENST00000514488 CAP1Q01518 475 aa11.13□□□□□ -0.63
MATR3-224ENST00000514488 PNMA1Q8ND90 353 aa11.13□□□□□ -0.63
MATR3-224ENST00000514488 JARID2Q92833 1246 aaPredicted RBP11.13□□□□□ -0.63
MATR3-224ENST00000514488 ZNF775Q96BV0 537 aaPredicted RBP11.13□□□□□ -0.63
MATR3-224ENST00000514488 HMX1Q9NP08 348 aaPredicted RBP11.13□□□□□ -0.63
MATR3-224ENST00000514488 ANGEL1Q9UNK9 670 aaKnown RBP11.13□□□□□ -0.63
MATR3-224ENST00000514488 ECM29Q5VYK3 1845 aa11.13□□□□□ -0.63
MATR3-224ENST00000514488 ZSWIM8A7E2V4 1837 aa11.12□□□□□ -0.63
MATR3-224ENST00000514488 IGF2BP3O00425 579 aaKnown RBP eCLIP11.12□□□□□ -0.63
MATR3-224ENST00000514488 GRM5P41594 1212 aa11.12□□□□□ -0.63
MATR3-224ENST00000514488 RIPK4P57078 832 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms