RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 RSBN1LQ6PCB5 846 aaPredicted RBP18.85■□□□□ 0.61
NUP54-214ENST00000514307 TBC1D10CQ8IV04 446 aa18.85■□□□□ 0.61
NUP54-214ENST00000514307 OGFOD1Q8N543 542 aa18.85■□□□□ 0.61
NUP54-214ENST00000514307 BRF1Q92994 677 aa18.85■□□□□ 0.61
NUP54-214ENST00000514307 ZDHHC15Q96MV8 337 aa18.85■□□□□ 0.61
NUP54-214ENST00000514307 FOXD4L1Q9NU39 408 aa18.85■□□□□ 0.61
NUP54-214ENST00000514307 TPCN1Q9ULQ1 816 aa18.85■□□□□ 0.61
NUP54-214ENST00000514307 LTBP3Q9NS15 1303 aa18.84■□□□□ 0.61
NUP54-214ENST00000514307 DHX16O60231 1041 aaKnown RBP18.84■□□□□ 0.61
NUP54-214ENST00000514307 FGRP09769 529 aa18.84■□□□□ 0.61
NUP54-214ENST00000514307 RBM5P52756 815 aaKnown RBP eCLIP18.84■□□□□ 0.61
NUP54-214ENST00000514307 EVCP57679 992 aa18.84■□□□□ 0.61
NUP54-214ENST00000514307 C12orf60Q5U649 245 aa18.84■□□□□ 0.61
NUP54-214ENST00000514307 SYNE3Q6ZMZ3 975 aa18.84■□□□□ 0.61
NUP54-214ENST00000514307 KIAA0825Q8IV33 1275 aa18.84■□□□□ 0.61
NUP54-214ENST00000514307 TCEANC2Q96MN5 208 aa18.84■□□□□ 0.61
NUP54-214ENST00000514307 MXD3Q9BW11 206 aa18.84■□□□□ 0.61
NUP54-214ENST00000514307 NBPF3Q9H094 633 aa18.84■□□□□ 0.61
NUP54-214ENST00000514307 ZSWIM5Q9P217 1185 aa18.84■□□□□ 0.61
NUP54-214ENST00000514307 MKRN1Q9UHC7 482 aaKnown RBP18.84■□□□□ 0.61
NUP54-214ENST00000514307 SMC3Q9UQE7 1217 aa18.84■□□□□ 0.61
NUP54-214ENST00000514307 B4E1Z4 1266 aa18.83■□□□□ 0.6
NUP54-214ENST00000514307 SCNN1DP51172 638 aa18.83■□□□□ 0.6
NUP54-214ENST00000514307 RHBDL3P58872 404 aa18.83■□□□□ 0.6
NUP54-214ENST00000514307 ME3Q16798 604 aa18.83■□□□□ 0.6
NUP54-214ENST00000514307 CCDC178Q5BJE1 867 aa18.83■□□□□ 0.6
NUP54-214ENST00000514307 RRP12Q5JTH9 1297 aaKnown RBP18.83■□□□□ 0.6
NUP54-214ENST00000514307 TTC6Q86TZ1 520 aa18.83■□□□□ 0.6
NUP54-214ENST00000514307 AGBL3Q8NEM8 1001 aa18.83■□□□□ 0.6
NUP54-214ENST00000514307 LARP6Q9BRS8 491 aaKnown RBP18.83■□□□□ 0.6
NUP54-214ENST00000514307 MYH7P12883 1935 aa18.82■□□□□ 0.6
NUP54-214ENST00000514307 YDJCA8MPS7 323 aa18.82■□□□□ 0.6
NUP54-214ENST00000514307 IFIT3O14879 490 aaKnown RBP18.82■□□□□ 0.6
NUP54-214ENST00000514307 ORC4O43929 436 aa18.82■□□□□ 0.6
NUP54-214ENST00000514307 KDM4AO75164 1064 aa18.82■□□□□ 0.6
NUP54-214ENST00000514307 DDIT3P35638 169 aa18.82■□□□□ 0.6
NUP54-214ENST00000514307 LIFRP42702 1097 aa18.82■□□□□ 0.6
NUP54-214ENST00000514307 CHST3Q7LGC8 479 aa18.82■□□□□ 0.6
NUP54-214ENST00000514307 TAOK2Q9UL54 1235 aa18.82■□□□□ 0.6
NUP54-214ENST00000514307 ANGEL1Q9UNK9 670 aaKnown RBP18.82■□□□□ 0.6
NUP54-214ENST00000514307 PFKFB2O60825 505 aa18.81■□□□□ 0.6
NUP54-214ENST00000514307 RAD17O75943 681 aa18.81■□□□□ 0.6
NUP54-214ENST00000514307 USP17L8P0C7I0 530 aa18.81■□□□□ 0.6
NUP54-214ENST00000514307 TMEM67Q5HYA8 995 aa18.81■□□□□ 0.6
NUP54-214ENST00000514307 CIAPIN1Q6FI81 312 aa18.81■□□□□ 0.6
NUP54-214ENST00000514307 APOBEC3HQ6NTF7 200 aaKnown RBP18.81■□□□□ 0.6
NUP54-214ENST00000514307 IQCA1Q86XH1 822 aa18.81■□□□□ 0.6
NUP54-214ENST00000514307 MAPKAPK5Q8IW41 473 aa18.81■□□□□ 0.6
NUP54-214ENST00000514307 ZNF444Q8N0Y2 327 aaPredicted RBP18.81■□□□□ 0.6
NUP54-214ENST00000514307 LLPHQ9BRT6 129 aaKnown RBP18.81■□□□□ 0.6
NUP54-214ENST00000514307 UBAC1Q9BSL1 405 aa18.81■□□□□ 0.6
NUP54-214ENST00000514307 LRRC2Q9BYS8 371 aa18.81■□□□□ 0.6
NUP54-214ENST00000514307 MKNK2Q9HBH9 465 aa18.81■□□□□ 0.6
NUP54-214ENST00000514307 CACNA1SQ13698 1873 aa18.81■□□□□ 0.6
NUP54-214ENST00000514307 KIF13BQ9NQT8 1826 aa18.81■□□□□ 0.6
NUP54-214ENST00000514307 PSMD14O00487 310 aa18.8■□□□□ 0.6
NUP54-214ENST00000514307 RANBP6O60518 1105 aaKnown RBP18.8■□□□□ 0.6
NUP54-214ENST00000514307 NPM3O75607 178 aaKnown RBP18.8■□□□□ 0.6
NUP54-214ENST00000514307 EIF6P56537 245 aaKnown RBP18.8■□□□□ 0.6
NUP54-214ENST00000514307 APOBRQ0VD83 1088 aa18.8■□□□□ 0.6
NUP54-214ENST00000514307 CDC42EP5Q6NZY7 148 aa18.8■□□□□ 0.6
NUP54-214ENST00000514307 NFXL1Q6ZNB6 911 aa18.8■□□□□ 0.6
NUP54-214ENST00000514307 CYB5R4Q7L1T6 521 aa18.8■□□□□ 0.6
NUP54-214ENST00000514307 CCDC83Q8IWF9 413 aa18.8■□□□□ 0.6
NUP54-214ENST00000514307 IGDCC4Q8TDY8 1250 aa18.8■□□□□ 0.6
NUP54-214ENST00000514307 FHDC1Q9C0D6 1143 aaPredicted RBP18.8■□□□□ 0.6
NUP54-214ENST00000514307 NAP1L2Q9ULW6 460 aaPredicted RBP18.8■□□□□ 0.6
NUP54-214ENST00000514307 KIF3AQ9Y496 699 aa18.8■□□□□ 0.6
NUP54-214ENST00000514307 CCDC69A6NI79 296 aa18.79■□□□□ 0.6
NUP54-214ENST00000514307 PDCP20941 246 aa18.79■□□□□ 0.6
NUP54-214ENST00000514307 PDIA3P30101 505 aaKnown RBP18.79■□□□□ 0.6
NUP54-214ENST00000514307 CXCL9Q07325 125 aa18.79■□□□□ 0.6
NUP54-214ENST00000514307 ARHGAP27Q6ZUM4 889 aa18.79■□□□□ 0.6
NUP54-214ENST00000514307 NLGN2Q8NFZ4 835 aa18.79■□□□□ 0.6
NUP54-214ENST00000514307 INCENPQ9NQS7 918 aa18.79■□□□□ 0.6
NUP54-214ENST00000514307 NEDD4P46934 1319 aa18.78■□□□□ 0.6
NUP54-214ENST00000514307 CYP2D7A0A087X1C5 515 aa18.78■□□□□ 0.6
NUP54-214ENST00000514307 NFKBIEO00221 500 aa18.78■□□□□ 0.6
NUP54-214ENST00000514307 SH2B2O14492 632 aaPredicted RBP18.78■□□□□ 0.6
NUP54-214ENST00000514307 RPS12P25398 132 aaKnown RBP18.78■□□□□ 0.6
NUP54-214ENST00000514307 ANTXR2P58335 489 aa18.78■□□□□ 0.6
NUP54-214ENST00000514307 STK3Q13188 491 aa18.78■□□□□ 0.6
NUP54-214ENST00000514307 WTAPQ15007 396 aa18.78■□□□□ 0.6
NUP54-214ENST00000514307 DLGAP5Q15398 846 aa18.78■□□□□ 0.6
NUP54-214ENST00000514307 CPLX2Q6PUV4 134 aaKnown RBP18.78■□□□□ 0.6
NUP54-214ENST00000514307 STK11IPQ8N1F8 1099 aa18.78■□□□□ 0.6
NUP54-214ENST00000514307 NECAB1Q8N987 351 aa18.78■□□□□ 0.6
NUP54-214ENST00000514307 GTF3C6Q969F1 213 aa18.78■□□□□ 0.6
NUP54-214ENST00000514307 GMLQ99445 158 aa18.78■□□□□ 0.6
NUP54-214ENST00000514307 DHX36Q9H2U1 1008 aaKnown RBP18.78■□□□□ 0.6
NUP54-214ENST00000514307 TMOD2Q9NZR1 351 aa18.78■□□□□ 0.6
NUP54-214ENST00000514307 FLT1P17948 1338 aa18.77■□□□□ 0.6
NUP54-214ENST00000514307 KLF18A0A0U1RQI7 1052 aa18.77■□□□□ 0.6
NUP54-214ENST00000514307 HLA-DOAP06340 250 aa18.77■□□□□ 0.6
NUP54-214ENST00000514307 PPP2R5BQ15173 497 aa18.77■□□□□ 0.6
NUP54-214ENST00000514307 CFAP100Q494V2 611 aa18.77■□□□□ 0.6
NUP54-214ENST00000514307 SGMS1Q86VZ5 419 aa18.77■□□□□ 0.6
NUP54-214ENST00000514307 IDI2Q9BXS1 227 aa18.77■□□□□ 0.6
NUP54-214ENST00000514307 SAP30BPQ9UHR5 308 aaKnown RBP18.77■□□□□ 0.6
NUP54-214ENST00000514307 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms