RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 GLRX3O76003 335 aaKnown RBP24.47■■□□□ 1.51
USP53-208ENST00000514305 TTF1Q15361 905 aaPredicted RBP24.47■■□□□ 1.51
USP53-208ENST00000514305 PKN2Q16513 984 aaKnown RBP24.47■■□□□ 1.51
USP53-208ENST00000514305 CFHR5Q9BXR6 569 aa24.47■■□□□ 1.51
USP53-208ENST00000514305 USP2O75604 605 aaPredicted RBP24.46■■□□□ 1.51
USP53-208ENST00000514305 RASGRF1Q13972 1273 aa24.45■■□□□ 1.5
USP53-208ENST00000514305 GRIK5Q16478 980 aa24.45■■□□□ 1.5
USP53-208ENST00000514305 IFNL1Q8IU54 200 aa24.45■■□□□ 1.5
USP53-208ENST00000514305 TMOD2Q9NZR1 351 aa24.45■■□□□ 1.5
USP53-208ENST00000514305 SALL1Q9NSC2 1324 aa24.44■■□□□ 1.5
USP53-208ENST00000514305 FKTNO75072 461 aa24.44■■□□□ 1.5
USP53-208ENST00000514305 HMG20BQ9P0W2 317 aa24.44■■□□□ 1.5
USP53-208ENST00000514305 STAP2Q9UGK3 403 aa24.44■■□□□ 1.5
USP53-208ENST00000514305 MCAMP43121 646 aa24.43■■□□□ 1.5
USP53-208ENST00000514305 PDE1AP54750 535 aa24.43■■□□□ 1.5
USP53-208ENST00000514305 OTUD7BQ6GQQ9 843 aa24.43■■□□□ 1.5
USP53-208ENST00000514305 SLF2Q8IX21 1173 aa24.43■■□□□ 1.5
USP53-208ENST00000514305 TMEM39BQ9GZU3 492 aa24.43■■□□□ 1.5
USP53-208ENST00000514305 BOLA2Q9H3K6 86 aa24.43■■□□□ 1.5
USP53-208ENST00000514305 LRRFIP1Q32MZ4 808 aaKnown RBP24.42■■□□□ 1.5
USP53-208ENST00000514305 TMED8Q6PL24 325 aaPredicted RBP24.42■■□□□ 1.5
USP53-208ENST00000514305 ZDHHC15Q96MV8 337 aa24.42■■□□□ 1.5
USP53-208ENST00000514305 TEPSINQ96N21 525 aa24.42■■□□□ 1.5
USP53-208ENST00000514305 MRIQ9BWK5 157 aa24.42■■□□□ 1.5
USP53-208ENST00000514305 OSBPL3Q9H4L5 887 aa24.42■■□□□ 1.5
USP53-208ENST00000514305 LDHBP07195 334 aaKnown RBP24.41■■□□□ 1.5
USP53-208ENST00000514305 ERICH6Q7L0X2 663 aa24.41■■□□□ 1.5
USP53-208ENST00000514305 HAUS7Q99871 368 aa24.41■■□□□ 1.5
USP53-208ENST00000514305 ELP3Q9H9T3 547 aa24.41■■□□□ 1.5
USP53-208ENST00000514305 LRP2BPQ9P2M1 347 aa24.41■■□□□ 1.5
USP53-208ENST00000514305 ABCF2Q9UG63 623 aa24.41■■□□□ 1.5
USP53-208ENST00000514305 HPS5Q9UPZ3 1129 aa24.41■■□□□ 1.5
USP53-208ENST00000514305 ZAP70P43403 619 aa24.4■■□□□ 1.5
USP53-208ENST00000514305 DNAJC2Q99543 621 aaKnown RBP24.4■■□□□ 1.5
USP53-208ENST00000514305 IGF2BP3O00425 579 aaKnown RBP eCLIP24.39■■□□□ 1.49
USP53-208ENST00000514305 CACNB3P54284 484 aa24.39■■□□□ 1.49
USP53-208ENST00000514305 SOX10P56693 466 aa24.39■■□□□ 1.49
USP53-208ENST00000514305 PLEKHM2Q8IWE5 1019 aa24.39■■□□□ 1.49
USP53-208ENST00000514305 CDAN1Q8IWY9 1227 aa24.39■■□□□ 1.49
USP53-208ENST00000514305 OPTNQ96CV9 577 aa24.39■■□□□ 1.49
USP53-208ENST00000514305 HOOK2Q96ED9 719 aa24.39■■□□□ 1.49
USP53-208ENST00000514305 R3HDMLQ9H3Y0 253 aa24.39■■□□□ 1.49
USP53-208ENST00000514305 SNRKQ9NRH2 765 aa24.39■■□□□ 1.49
USP53-208ENST00000514305 CSADQ9Y600 493 aa24.39■■□□□ 1.49
USP53-208ENST00000514305 SALL3Q9BXA9 1300 aa24.38■■□□□ 1.49
USP53-208ENST00000514305 GJA5P36382 358 aa24.38■■□□□ 1.49
USP53-208ENST00000514305 GSTO1P78417 241 aa24.38■■□□□ 1.49
USP53-208ENST00000514305 MAP3K12Q12852 859 aa24.38■■□□□ 1.49
USP53-208ENST00000514305 HHIPL2Q6UWX4 724 aa24.38■■□□□ 1.49
USP53-208ENST00000514305 FAM83AQ86UY5 434 aa24.38■■□□□ 1.49
USP53-208ENST00000514305 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.38■■□□□ 1.49
USP53-208ENST00000514305 PAG1Q9NWQ8 432 aa24.38■■□□□ 1.49
USP53-208ENST00000514305 GTF3C3Q9Y5Q9 886 aa24.38■■□□□ 1.49
USP53-208ENST00000514305 AK9Q5TCS8 1911 aa24.37■■□□□ 1.49
USP53-208ENST00000514305 LDHCP07864 332 aa24.37■■□□□ 1.49
USP53-208ENST00000514305 MAP3K9P80192 1104 aa24.37■■□□□ 1.49
USP53-208ENST00000514305 FKBP1CQ5VVH2 108 aa24.37■■□□□ 1.49
USP53-208ENST00000514305 ZSCAN25Q6NSZ9 544 aa24.37■■□□□ 1.49
USP53-208ENST00000514305 FBXO46Q6PJ61 603 aaPredicted RBP24.37■■□□□ 1.49
USP53-208ENST00000514305 DZIP1Q86YF9 867 aaKnown RBP24.37■■□□□ 1.49
USP53-208ENST00000514305 OTUD7AQ8TE49 926 aaPredicted RBP24.37■■□□□ 1.49
USP53-208ENST00000514305 CYP2E1P05181 493 aaPredicted RBP24.36■■□□□ 1.49
USP53-208ENST00000514305 VGLL4Q14135 290 aa24.36■■□□□ 1.49
USP53-208ENST00000514305 APOBEC3HQ6NTF7 200 aaKnown RBP24.36■■□□□ 1.49
USP53-208ENST00000514305 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.36■■□□□ 1.49
USP53-208ENST00000514305 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.36■■□□□ 1.49
USP53-208ENST00000514305 RAI14Q9P0K7 980 aa24.36■■□□□ 1.49
USP53-208ENST00000514305 GOLIM4O00461 696 aa24.35■■□□□ 1.49
USP53-208ENST00000514305 TICAM2Q86XR7 235 aa24.35■■□□□ 1.49
USP53-208ENST00000514305 PI4K2BQ8TCG2 481 aa24.35■■□□□ 1.49
USP53-208ENST00000514305 RPAP1Q9BWH6 1393 aaPredicted RBP24.34■■□□□ 1.49
USP53-208ENST00000514305 TESPA1A2RU30 521 aaPredicted RBP24.34■■□□□ 1.49
USP53-208ENST00000514305 PI16Q6UXB8 463 aa24.34■■□□□ 1.49
USP53-208ENST00000514305 TRIM6-TRIM34B2RNG4 842 aa24.33■■□□□ 1.49
USP53-208ENST00000514305 IDH1O75874 414 aaKnown RBP24.33■■□□□ 1.49
USP53-208ENST00000514305 PDE4AP27815 886 aa24.33■■□□□ 1.49
USP53-208ENST00000514305 GTF2A2P52657 109 aa24.33■■□□□ 1.49
USP53-208ENST00000514305 CRHR2Q13324 411 aa24.33■■□□□ 1.49
USP53-208ENST00000514305 TSHZ3Q63HK5 1081 aa24.33■■□□□ 1.49
USP53-208ENST00000514305 DCAF15Q66K64 600 aa24.33■■□□□ 1.49
USP53-208ENST00000514305 EVI5LQ96CN4 794 aa24.33■■□□□ 1.49
USP53-208ENST00000514305 OTUD5Q96G74 571 aa24.33■■□□□ 1.49
USP53-208ENST00000514305 NOL10Q9BSC4 688 aaKnown RBP24.33■■□□□ 1.49
USP53-208ENST00000514305 ERO1AQ96HE7 468 aa24.32■■□□□ 1.48
USP53-208ENST00000514305 WRNIP1Q96S55 665 aa24.32■■□□□ 1.48
USP53-208ENST00000514305 TRIM17Q9Y577 477 aa24.32■■□□□ 1.48
USP53-208ENST00000514305 MYH2Q9UKX2 1941 aa24.31■■□□□ 1.48
USP53-208ENST00000514305 CCL15-CCL14A0A0B4J2E2 113 aa24.31■■□□□ 1.48
USP53-208ENST00000514305 PRDX5P30044 214 aa24.31■■□□□ 1.48
USP53-208ENST00000514305 CCL15Q16663 113 aa24.31■■□□□ 1.48
USP53-208ENST00000514305 NAA16Q6N069 864 aaPredicted RBP24.31■■□□□ 1.48
USP53-208ENST00000514305 TBC1D9Q6ZT07 1266 aa24.31■■□□□ 1.48
USP53-208ENST00000514305 CERS3Q8IU89 383 aa24.31■■□□□ 1.48
USP53-208ENST00000514305 KBTBD3Q8NAB2 608 aa24.31■■□□□ 1.48
USP53-208ENST00000514305 MS4A4AQ96JQ5 239 aa24.31■■□□□ 1.48
USP53-208ENST00000514305 PTPN18Q99952 460 aa24.31■■□□□ 1.48
USP53-208ENST00000514305 DAGLAQ9Y4D2 1042 aa24.31■■□□□ 1.48
USP53-208ENST00000514305 ZFYP08048 801 aaPredicted RBP24.3■■□□□ 1.48
USP53-208ENST00000514305 DIXDC1Q155Q3 683 aa24.3■■□□□ 1.48
USP53-208ENST00000514305 FAM151AQ8WW52 585 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms