RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	DAGLA	Q9Y4D2	1042 aa		5.53	□□□□□ -1.52
CALCOCO2-223	ENST00000514267	CYP26A1	O43174	497 aa		5.52	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	F13B	P05160	661 aa		5.52	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	P4HB	P07237	508 aa	Known RBP	5.52	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	NFIC	P08651	508 aa		5.52	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	LMNB1	P20700	586 aa		5.52	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	OGFOD3	Q6PK18	319 aa		5.52	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	PI16	Q6UXB8	463 aa		5.52	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	SMYD4	Q8IYR2	804 aa	Predicted RBP	5.52	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	AGBL5	Q8NDL9	886 aa		5.52	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	GIPC2	Q8TF65	315 aa		5.52	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	MRRF	Q96E11	262 aa	Known RBP	5.52	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	MKNK2	Q9HBH9	465 aa		5.52	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	CBX8	Q9HC52	389 aa		5.52	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	PCOLCE2	Q9UKZ9	415 aa		5.52	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	ZNF862	O60290	1169 aa		5.51	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	CTSB	P07858	339 aa		5.51	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	USP17L7	P0C7H9	530 aa		5.51	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	LIG1	P18858	919 aa		5.51	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	RPS26	P62854	115 aa	Known RBP	5.51	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	ZNF252P-AS1	Q0IIN9	211 aa		5.51	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	MAP1S	Q66K74	1059 aa	Predicted RBP	5.51	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	TPTE2	Q6XPS3	522 aa		5.51	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	RNF214	Q8ND24	703 aa		5.51	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	FANCD2OS	Q96PS1	177 aa		5.51	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	SSU72	Q9NP77	194 aa	Known RBP	5.51	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	ENC1	O14682	589 aa		5.5	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	FANCG	O15287	622 aa		5.5	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	ECEL1	O95672	775 aa		5.5	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	IRAK1	P51617	712 aa		5.5	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	ZNF157	P51786	506 aa	Predicted RBP	5.5	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	GP2	P55259	537 aa	Known RBP	5.5	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	ZC3H12A	Q5D1E8	599 aa	Known RBP	5.5	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	FBXO33	Q7Z6M2	555 aa		5.5	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	PICK1	Q9NRD5	415 aa		5.5	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	CACNA2D2	Q9NY47	1150 aa		5.5	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	PPP1R9A	Q9ULJ8	1098 aa		5.5	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	PCDHGC5	Q9Y5F6	944 aa		5.5	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	TACC3	Q9Y6A5	838 aa		5.5	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	MSMP	Q1L6U9	139 aa		5.49	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	SEZ6L2	Q6UXD5	910 aa		5.49	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	CDC37L1	Q7L3B6	337 aa		5.49	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	OSBPL7	Q9BZF2	842 aa		5.49	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	DISC1	Q9NRI5	854 aa		5.49	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	TTF2	Q9UNY4	1162 aa	Known RBP	5.49	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	AK5	Q9Y6K8	562 aa		5.49	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	RNGTT	O60942	597 aa	Known RBP	5.48	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	ST13	P50502	369 aa	Known RBP	5.48	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	TTLL4	Q14679	1199 aa		5.48	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	ARHGAP27	Q6ZUM4	889 aa		5.48	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	HDX	Q7Z353	690 aa		5.48	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	5.48	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	GATA6	Q92908	595 aa		5.48	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	ZC3H12C	Q9C0D7	883 aa	Known RBP	5.48	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	C1GALT1	Q9NS00	363 aa		5.48	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	GTF2IRD1	Q9UHL9	959 aa		5.48	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	COL17A1	Q9UMD9	1497 aa	Predicted RBP	5.47	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	PAX4	O43316	350 aa		5.47	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	TCF3	P15923	654 aa		5.47	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	XPC	Q01831	940 aa	Predicted RBP	5.47	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	CCDC85B	Q15834	202 aa	Predicted RBP	5.47	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	PCNX4	Q63HM2	1172 aa		5.47	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	MCTP1	Q6DN14	999 aa		5.47	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	ZNF746	Q6NUN9	644 aa	Predicted RBP	5.47	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	ZNF765	Q7L2R6	523 aa		5.47	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	GPBAR1	Q8TDU6	330 aa		5.47	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	ELMO3	Q96BJ8	720 aa		5.47	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	NOC4L	Q9BVI4	516 aa	Known RBP	5.47	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	SNCAIP	Q9Y6H5	919 aa		5.47	□□□□□ -1.53
CALCOCO2-223	ENST00000514267	FAM170B	A6NMN3	283 aa		5.46	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	IGSF3	O75054	1194 aa		5.46	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	BMP6	P22004	513 aa		5.46	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	ADM	P35318	185 aa		5.46	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	PSMD2	Q13200	908 aa		5.46	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	TTBK2	Q6IQ55	1244 aa		5.46	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	ZNF507	Q8TCN5	953 aa		5.46	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	WDR89	Q96FK6	387 aa	Predicted RBP	5.46	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	COX4I2	Q96KJ9	171 aa		5.46	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	CCDC39	Q9UFE4	941 aa		5.46	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	PCDHA4	Q9UN74	947 aa		5.46	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	SLC5A6	Q9Y289	635 aa		5.46	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	MED26	O95402	600 aa		5.45	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	FAM87A	P0C7U9	286 aa		5.45	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	HCLS1	P14317	486 aa	Predicted RBP	5.45	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	PWP1	Q13610	501 aa		5.45	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	TMC4	Q7Z404	712 aa		5.45	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	NETO1	Q8TDF5	533 aa		5.45	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	ISL2	Q96A47	359 aa		5.45	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	DUSP9	Q99956	384 aa	Known RBP	5.45	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	LRRC4C	Q9HCJ2	640 aa		5.45	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	MRS2	Q9HD23	443 aa		5.45	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	WWC3	Q9ULE0	1092 aa		5.45	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	TMEM265	A0A087WTH1	108 aa		5.44	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	IGF2BP3	O00425	579 aa	Known RBP eCLIP	5.44	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	HOXA10	P31260	410 aa	Predicted RBP	5.44	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	CAP2	P40123	477 aa		5.44	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	DAB2	P98082	770 aa		5.44	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	IFI16	Q16666	785 aa	Known RBP	5.44	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	ZBTB37	Q5TC79	503 aa		5.44	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	CCDC84	Q86UT8	332 aa	Predicted RBP	5.44	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms