RNA–Protein interactions for RNA: ENST00000514231.1

PDE4D-221, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-221ENST00000514231 FOSL1P15407 271 aa9.46□□□□□ -0.9
PDE4D-221ENST00000514231 ERCC3P19447 782 aa9.46□□□□□ -0.9
PDE4D-221ENST00000514231 SPINK2P20155 84 aa9.46□□□□□ -0.9
PDE4D-221ENST00000514231 LLGL2Q6P1M3 1020 aa9.46□□□□□ -0.9
PDE4D-221ENST00000514231 MPRIPQ6WCQ1 1025 aa9.46□□□□□ -0.9
PDE4D-221ENST00000514231 SMYD4Q8IYR2 804 aaPredicted RBP9.46□□□□□ -0.9
PDE4D-221ENST00000514231 DYNC1LI2O43237 492 aaPredicted RBP9.45□□□□□ -0.9
PDE4D-221ENST00000514231 HOXA10P31260 410 aaPredicted RBP9.45□□□□□ -0.9
PDE4D-221ENST00000514231 TTLL4Q14679 1199 aa9.45□□□□□ -0.9
PDE4D-221ENST00000514231 OGFOD3Q6PK18 319 aa9.45□□□□□ -0.9
PDE4D-221ENST00000514231 ACSBG1Q96GR2 724 aa9.45□□□□□ -0.9
PDE4D-221ENST00000514231 RNF19AQ9NV58 838 aa9.45□□□□□ -0.9
PDE4D-221ENST00000514231 PCOLCE2Q9UKZ9 415 aa9.45□□□□□ -0.9
PDE4D-221ENST00000514231 FAM170BA6NMN3 283 aa9.44□□□□□ -0.9
PDE4D-221ENST00000514231 RNF214Q8ND24 703 aa9.44□□□□□ -0.9
PDE4D-221ENST00000514231 LGR6Q9HBX8 967 aa9.44□□□□□ -0.9
PDE4D-221ENST00000514231 PARP2Q9UGN5 583 aa9.44□□□□□ -0.9
PDE4D-221ENST00000514231 TTF2Q9UNY4 1162 aaKnown RBP9.44□□□□□ -0.9
PDE4D-221ENST00000514231 CYP26A1O43174 497 aa9.43□□□□□ -0.9
PDE4D-221ENST00000514231 RNGTTO60942 597 aaKnown RBP9.43□□□□□ -0.9
PDE4D-221ENST00000514231 CELA3AP09093 270 aa9.43□□□□□ -0.9
PDE4D-221ENST00000514231 DAB2P98082 770 aa9.43□□□□□ -0.9
PDE4D-221ENST00000514231 CCDC27Q2M243 656 aa9.43□□□□□ -0.9
PDE4D-221ENST00000514231 PCNX4Q63HM2 1172 aa9.43□□□□□ -0.9
PDE4D-221ENST00000514231 HCLS1P14317 486 aaPredicted RBP9.42□□□□□ -0.9
PDE4D-221ENST00000514231 RASIP1Q5U651 963 aa9.42□□□□□ -0.9
PDE4D-221ENST00000514231 ZNF765Q7L2R6 523 aa9.42□□□□□ -0.9
PDE4D-221ENST00000514231 FBXO33Q7Z6M2 555 aa9.42□□□□□ -0.9
PDE4D-221ENST00000514231 KRTAP4-8Q9BYQ9 185 aa9.42□□□□□ -0.9
PDE4D-221ENST00000514231 RING1Q06587 406 aa9.41□□□□□ -0.9
PDE4D-221ENST00000514231 MSMPQ1L6U9 139 aa9.41□□□□□ -0.9
PDE4D-221ENST00000514231 WNT11O96014 354 aa9.4□□□□□ -0.9
PDE4D-221ENST00000514231 NEFMP07197 916 aa9.4□□□□□ -0.9
PDE4D-221ENST00000514231 XPCQ01831 940 aaPredicted RBP9.4□□□□□ -0.9
PDE4D-221ENST00000514231 PSMD2Q13200 908 aa9.4□□□□□ -0.9
PDE4D-221ENST00000514231 CYP27C1Q4G0S4 372 aa9.4□□□□□ -0.9
PDE4D-221ENST00000514231 TMC4Q7Z404 712 aa9.4□□□□□ -0.9
PDE4D-221ENST00000514231 SSU72Q9NP77 194 aaKnown RBP9.4□□□□□ -0.9
PDE4D-221ENST00000514231 PCDHA4Q9UN74 947 aa9.4□□□□□ -0.9
PDE4D-221ENST00000514231 RPS26P62854 115 aaKnown RBP9.39□□□□□ -0.91
PDE4D-221ENST00000514231 CCDC85BQ15834 202 aaPredicted RBP9.39□□□□□ -0.91
PDE4D-221ENST00000514231 TTBK2Q6IQ55 1244 aa9.39□□□□□ -0.91
PDE4D-221ENST00000514231 ISL2Q96A47 359 aa9.39□□□□□ -0.91
PDE4D-221ENST00000514231 PSMG3-AS1Q96PY0 264 aa9.39□□□□□ -0.91
PDE4D-221ENST00000514231 FANCGO15287 622 aa9.38□□□□□ -0.91
PDE4D-221ENST00000514231 ADAMTS4O75173 837 aa9.38□□□□□ -0.91
PDE4D-221ENST00000514231 CDK5R2Q13319 367 aa9.38□□□□□ -0.91
PDE4D-221ENST00000514231 C12orf40Q86WS4 652 aa9.38□□□□□ -0.91
PDE4D-221ENST00000514231 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.38□□□□□ -0.91
PDE4D-221ENST00000514231 CSADQ9Y600 493 aa9.38□□□□□ -0.91
PDE4D-221ENST00000514231 DCDC2CA8MYV0 355 aa9.37□□□□□ -0.91
PDE4D-221ENST00000514231 PRNPP04156 253 aa9.37□□□□□ -0.91
PDE4D-221ENST00000514231 FAM87AP0C7U9 286 aa9.37□□□□□ -0.91
PDE4D-221ENST00000514231 GP2P55259 537 aaKnown RBP9.37□□□□□ -0.91
PDE4D-221ENST00000514231 TAF1CQ15572 869 aaPredicted RBP9.37□□□□□ -0.91
PDE4D-221ENST00000514231 PPM1JQ5JR12 505 aa9.37□□□□□ -0.91
PDE4D-221ENST00000514231 RLBP1P12271 317 aa9.36□□□□□ -0.91
PDE4D-221ENST00000514231 NTF4P34130 210 aa9.36□□□□□ -0.91
PDE4D-221ENST00000514231 ST13P50502 369 aaKnown RBP9.36□□□□□ -0.91
PDE4D-221ENST00000514231 PTPN11Q06124 597 aaPredicted RBP9.36□□□□□ -0.91
PDE4D-221ENST00000514231 LRRC4CQ9HCJ2 640 aa9.36□□□□□ -0.91
PDE4D-221ENST00000514231 PICK1Q9NRD5 415 aa9.36□□□□□ -0.91
PDE4D-221ENST00000514231 BSDC1Q9NW68 430 aaPredicted RBP9.36□□□□□ -0.91
PDE4D-221ENST00000514231 ZC3H7BQ9UGR2 993 aaKnown RBP9.36□□□□□ -0.91
PDE4D-221ENST00000514231 USP31Q70CQ4 1352 aa9.36□□□□□ -0.91
PDE4D-221ENST00000514231 INPP5AQ14642 412 aa9.35□□□□□ -0.91
PDE4D-221ENST00000514231 ZBTB37Q5TC79 503 aa9.35□□□□□ -0.91
PDE4D-221ENST00000514231 MEI1Q5TIA1 1274 aa9.35□□□□□ -0.91
PDE4D-221ENST00000514231 AGMOQ6ZNB7 445 aa9.35□□□□□ -0.91
PDE4D-221ENST00000514231 CYFIP1Q7L576 1253 aa9.35□□□□□ -0.91
PDE4D-221ENST00000514231 ELMO3Q96BJ8 720 aa9.35□□□□□ -0.91
PDE4D-221ENST00000514231 NOC4LQ9BVI4 516 aaKnown RBP9.35□□□□□ -0.91
PDE4D-221ENST00000514231 DUSP23Q9BVJ7 150 aa9.35□□□□□ -0.91
PDE4D-221ENST00000514231 CCDC39Q9UFE4 941 aa9.35□□□□□ -0.91
PDE4D-221ENST00000514231 SNCAIPQ9Y6H5 919 aa9.35□□□□□ -0.91
PDE4D-221ENST00000514231 CTSHP09668 335 aa9.34□□□□□ -0.91
PDE4D-221ENST00000514231 CDC37L1Q7L3B6 337 aa9.34□□□□□ -0.91
PDE4D-221ENST00000514231 HDXQ7Z353 690 aa9.34□□□□□ -0.91
PDE4D-221ENST00000514231 KCT2Q8NC54 265 aa9.34□□□□□ -0.91
PDE4D-221ENST00000514231 OAS3Q9Y6K5 1087 aaKnown RBP9.34□□□□□ -0.91
PDE4D-221ENST00000514231 SORBS3O60504 671 aa9.33□□□□□ -0.92
PDE4D-221ENST00000514231 LMNB1P20700 586 aa9.33□□□□□ -0.92
PDE4D-221ENST00000514231 ITGAEP38570 1179 aa9.33□□□□□ -0.92
PDE4D-221ENST00000514231 TAGLNQ01995 201 aaKnown RBP9.33□□□□□ -0.92
PDE4D-221ENST00000514231 ZNF507Q8TCN5 953 aa9.33□□□□□ -0.92
PDE4D-221ENST00000514231 GAL3ST3Q96A11 431 aa9.33□□□□□ -0.92
PDE4D-221ENST00000514231 FAM161BQ96MY7 647 aa9.33□□□□□ -0.92
PDE4D-221ENST00000514231 ANGEL1Q9UNK9 670 aaKnown RBP9.33□□□□□ -0.92
PDE4D-221ENST00000514231 LEFTY1O75610 366 aa9.32□□□□□ -0.92
PDE4D-221ENST00000514231 LIG3P49916 1009 aa9.32□□□□□ -0.92
PDE4D-221ENST00000514231 LRFN4Q6PJG9 635 aa9.32□□□□□ -0.92
PDE4D-221ENST00000514231 PLPPR2Q96GM1 343 aa9.32□□□□□ -0.92
PDE4D-221ENST00000514231 VSIG10LQ86VR7 867 aa9.31□□□□□ -0.92
PDE4D-221ENST00000514231 MKNK2Q9HBH9 465 aa9.31□□□□□ -0.92
PDE4D-221ENST00000514231 PCDHB5Q9Y5E4 795 aa9.31□□□□□ -0.92
PDE4D-221ENST00000514231 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.3□□□□□ -0.92
PDE4D-221ENST00000514231 CRELD1Q96HD1 420 aa9.3□□□□□ -0.92
PDE4D-221ENST00000514231 FBXL18Q96ME1 805 aa9.3□□□□□ -0.92
PDE4D-221ENST00000514231 WNT10AQ9GZT5 417 aa9.3□□□□□ -0.92
PDE4D-221ENST00000514231 MRS2Q9HD23 443 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms