RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 CHD9Q3L8U1 2897 aa10.03□□□□□ -0.8
CLDND1-229ENST00000513988 KRT37O76014 449 aa10.03□□□□□ -0.8
CLDND1-229ENST00000513988 RTP1P59025 263 aa10.03□□□□□ -0.8
CLDND1-229ENST00000513988 EIF4A1P60842 406 aaKnown RBP10.03□□□□□ -0.8
CLDND1-229ENST00000513988 ADGRE1Q14246 886 aa10.03□□□□□ -0.8
CLDND1-229ENST00000513988 CSPP1Q1MSJ5 1256 aa10.03□□□□□ -0.8
CLDND1-229ENST00000513988 ANKRD18AQ8IVF6 992 aa10.03□□□□□ -0.8
CLDND1-229ENST00000513988 ZNF70Q9UC06 446 aaPredicted RBP10.03□□□□□ -0.8
CLDND1-229ENST00000513988 TCP10L2B9ZVM9 353 aa10.02□□□□□ -0.81
CLDND1-229ENST00000513988 ANXA1P04083 346 aa10.02□□□□□ -0.81
CLDND1-229ENST00000513988 TNNI2P48788 182 aa10.02□□□□□ -0.81
CLDND1-229ENST00000513988 MOGSQ13724 837 aa10.02□□□□□ -0.81
CLDND1-229ENST00000513988 SKIV2LQ15477 1246 aaKnown RBP10.02□□□□□ -0.81
CLDND1-229ENST00000513988 PROSER3Q2NL68 480 aa10.02□□□□□ -0.81
CLDND1-229ENST00000513988 MICALL1Q8N3F8 863 aa10.02□□□□□ -0.81
CLDND1-229ENST00000513988 CERS5Q8N5B7 392 aa10.02□□□□□ -0.81
CLDND1-229ENST00000513988 PNISRQ8TF01 805 aaKnown RBP10.02□□□□□ -0.81
CLDND1-229ENST00000513988 ATP11BQ9Y2G3 1177 aa10.02□□□□□ -0.81
CLDND1-229ENST00000513988 ARAP2Q8WZ64 1704 aa10.02□□□□□ -0.81
CLDND1-229ENST00000513988 ZFHX2Q9C0A1 2572 aaPredicted RBP10.01□□□□□ -0.81
CLDND1-229ENST00000513988 PRKAR2BP31323 418 aa10.01□□□□□ -0.81
CLDND1-229ENST00000513988 CCT4P50991 539 aaKnown RBP10.01□□□□□ -0.81
CLDND1-229ENST00000513988 PDIA6Q15084 440 aa10.01□□□□□ -0.81
CLDND1-229ENST00000513988 CCDC152Q4G0S7 254 aa10.01□□□□□ -0.81
CLDND1-229ENST00000513988 GPAT2Q6NUI2 795 aa10.01□□□□□ -0.81
CLDND1-229ENST00000513988 ERMP1Q7Z2K6 904 aa10.01□□□□□ -0.81
CLDND1-229ENST00000513988 TXNRD3Q86VQ6 643 aa10.01□□□□□ -0.81
CLDND1-229ENST00000513988 SMCR8Q8TEV9 937 aaPredicted RBP10.01□□□□□ -0.81
CLDND1-229ENST00000513988 XAGE3Q8WTP9 111 aa10.01□□□□□ -0.81
CLDND1-229ENST00000513988 COL26A1Q96A83 441 aa10.01□□□□□ -0.81
CLDND1-229ENST00000513988 RNF25Q96BH1 459 aaPredicted RBP10.01□□□□□ -0.81
CLDND1-229ENST00000513988 PHOX2BQ99453 314 aa10.01□□□□□ -0.81
CLDND1-229ENST00000513988 ERC2O15083 957 aa10□□□□□ -0.81
CLDND1-229ENST00000513988 HSP90B1P14625 803 aaKnown RBP10□□□□□ -0.81
CLDND1-229ENST00000513988 EIF2S2P20042 333 aaKnown RBP10□□□□□ -0.81
CLDND1-229ENST00000513988 ITGB8P26012 769 aa10□□□□□ -0.81
CLDND1-229ENST00000513988 MAP3K21Q5TCX8 1036 aa10□□□□□ -0.81
CLDND1-229ENST00000513988 TRIB2Q92519 343 aa10□□□□□ -0.81
CLDND1-229ENST00000513988 TDRD3Q9H7E2 651 aaKnown RBP10□□□□□ -0.81
CLDND1-229ENST00000513988 LRRC37A2A6NM11 1700 aa9.99□□□□□ -0.81
CLDND1-229ENST00000513988 ATP5J2-PTCD1G3V325 749 aa9.99□□□□□ -0.81
CLDND1-229ENST00000513988 HTATSF1O43719 755 aaKnown RBP9.99□□□□□ -0.81
CLDND1-229ENST00000513988 EIF4G2P78344 907 aaKnown RBP eCLIP9.99□□□□□ -0.81
CLDND1-229ENST00000513988 CCDC129Q6ZRS4 1044 aa9.99□□□□□ -0.81
CLDND1-229ENST00000513988 HOOK2Q96ED9 719 aa9.99□□□□□ -0.81
CLDND1-229ENST00000513988 CCDC85AQ96PX6 553 aaPredicted RBP9.99□□□□□ -0.81
CLDND1-229ENST00000513988 PTPRZ1P23471 2315 aaPredicted RBP9.99□□□□□ -0.81
CLDND1-229ENST00000513988 ATRXP46100 2492 aa9.98□□□□□ -0.81
CLDND1-229ENST00000513988 TLL1O43897 1013 aa9.98□□□□□ -0.81
CLDND1-229ENST00000513988 ANKRD13CQ8N6S4 541 aa9.98□□□□□ -0.81
CLDND1-229ENST00000513988 ISCA1Q9BUE6 129 aa9.98□□□□□ -0.81
CLDND1-229ENST00000513988 MINPP1Q9UNW1 487 aa9.98□□□□□ -0.81
CLDND1-229ENST00000513988 KNSTRNQ9Y448 316 aa9.98□□□□□ -0.81
CLDND1-229ENST00000513988 KMT2BQ9UMN6 2715 aaPredicted RBP9.98□□□□□ -0.81
CLDND1-229ENST00000513988 CHD7Q9P2D1 2997 aa9.97□□□□□ -0.81
CLDND1-229ENST00000513988 KLRK1P26718 216 aa9.97□□□□□ -0.81
CLDND1-229ENST00000513988 INPP5BP32019 993 aa9.97□□□□□ -0.81
CLDND1-229ENST00000513988 EPHB4P54760 987 aa9.97□□□□□ -0.81
CLDND1-229ENST00000513988 DCAF15Q66K64 600 aa9.97□□□□□ -0.81
CLDND1-229ENST00000513988 FASTKD5Q7L8L6 764 aaKnown RBP9.97□□□□□ -0.81
CLDND1-229ENST00000513988 HERVK_113Q902F9 699 aa9.97□□□□□ -0.81
CLDND1-229ENST00000513988 CDC5LQ99459 802 aaKnown RBP9.97□□□□□ -0.81
CLDND1-229ENST00000513988 PDLIM7Q9NR12 457 aa9.97□□□□□ -0.81
CLDND1-229ENST00000513988 LEMD3Q9Y2U8 911 aa9.97□□□□□ -0.81
CLDND1-229ENST00000513988 AK9Q5TCS8 1911 aa9.97□□□□□ -0.81
CLDND1-229ENST00000513988 ZNF318Q5VUA4 2279 aa9.96□□□□□ -0.81
CLDND1-229ENST00000513988 CXCL11O14625 94 aa9.96□□□□□ -0.82
CLDND1-229ENST00000513988 GFRA3O60609 400 aa9.96□□□□□ -0.82
CLDND1-229ENST00000513988 CYP2B6P20813 491 aa9.96□□□□□ -0.82
CLDND1-229ENST00000513988 CCND3P30281 292 aaPredicted RBP9.96□□□□□ -0.82
CLDND1-229ENST00000513988 PBX2P40425 430 aa9.96□□□□□ -0.82
CLDND1-229ENST00000513988 CACNB2Q08289 660 aaPredicted RBP9.96□□□□□ -0.82
CLDND1-229ENST00000513988 FAM110CQ1W6H9 321 aa9.96□□□□□ -0.82
CLDND1-229ENST00000513988 GADL1Q6ZQY3 521 aa9.96□□□□□ -0.82
CLDND1-229ENST00000513988 ZNF341Q9BYN7 854 aa9.96□□□□□ -0.82
CLDND1-229ENST00000513988 PBX4Q9BYU1 374 aa9.96□□□□□ -0.82
CLDND1-229ENST00000513988 RSPH6AQ9H0K4 717 aa9.96□□□□□ -0.82
CLDND1-229ENST00000513988 CD209Q9NNX6 404 aa9.96□□□□□ -0.82
CLDND1-229ENST00000513988 GJD2Q9UKL4 321 aa9.96□□□□□ -0.82
CLDND1-229ENST00000513988 COG5Q9UP83 839 aa9.96□□□□□ -0.82
CLDND1-229ENST00000513988 SLC45A1Q9Y2W3 748 aa9.96□□□□□ -0.82
CLDND1-229ENST00000513988 PLXNA1Q9UIW2 1896 aa9.96□□□□□ -0.82
CLDND1-229ENST00000513988 TRIM43BA6NCK2 446 aa9.95□□□□□ -0.82
CLDND1-229ENST00000513988 ALADP13716 330 aa9.95□□□□□ -0.82
CLDND1-229ENST00000513988 ZKSCAN1P17029 563 aaPredicted RBP9.95□□□□□ -0.82
CLDND1-229ENST00000513988 FKBP1AP62942 108 aaKnown RBP9.95□□□□□ -0.82
CLDND1-229ENST00000513988 SH3RF1Q7Z6J0 888 aa9.95□□□□□ -0.82
CLDND1-229ENST00000513988 DZIP1LQ8IYY4 767 aaKnown RBP9.95□□□□□ -0.82
CLDND1-229ENST00000513988 TRIM43Q96BQ3 446 aaPredicted RBP9.95□□□□□ -0.82
CLDND1-229ENST00000513988 CD320Q9NPF0 282 aa9.95□□□□□ -0.82
CLDND1-229ENST00000513988 PLSCR2Q9NRY7 297 aa9.95□□□□□ -0.82
CLDND1-229ENST00000513988 BSDC1Q9NW68 430 aaPredicted RBP9.95□□□□□ -0.82
CLDND1-229ENST00000513988 RPAP1Q9BWH6 1393 aaPredicted RBP9.95□□□□□ -0.82
CLDND1-229ENST00000513988 RGS20O76081 388 aa9.94□□□□□ -0.82
CLDND1-229ENST00000513988 KCNJ4P48050 445 aa9.94□□□□□ -0.82
CLDND1-229ENST00000513988 TRIM60Q495X7 471 aa9.94□□□□□ -0.82
CLDND1-229ENST00000513988 TRMT44Q8IYL2 757 aaKnown RBP9.94□□□□□ -0.82
CLDND1-229ENST00000513988 PLBD2Q8NHP8 589 aa9.94□□□□□ -0.82
CLDND1-229ENST00000513988 SERPINA10Q9UK55 444 aa9.94□□□□□ -0.82
CLDND1-229ENST00000513988 FRMPD3Q5JV73 1810 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms