RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 EFHC2Q5JST6 749 aa8.69□□□□□ -1.02
HMGN1P17-201ENST00000513734 MPRIPQ6WCQ1 1025 aa8.69□□□□□ -1.02
HMGN1P17-201ENST00000513734 GJD3Q8N144 294 aa8.69□□□□□ -1.02
HMGN1P17-201ENST00000513734 TTC16Q8NEE8 873 aa8.69□□□□□ -1.02
HMGN1P17-201ENST00000513734 CEP63Q96MT8 703 aa8.69□□□□□ -1.02
HMGN1P17-201ENST00000513734 MTFR1LQ9H019 292 aa8.69□□□□□ -1.02
HMGN1P17-201ENST00000513734 GMPR2Q9P2T1 348 aaKnown RBP8.69□□□□□ -1.02
HMGN1P17-201ENST00000513734 USP20Q9Y2K6 914 aa8.69□□□□□ -1.02
HMGN1P17-201ENST00000513734 IGSF1Q8N6C5 1336 aa8.69□□□□□ -1.02
HMGN1P17-201ENST00000513734 KDM6AO15550 1401 aaPredicted RBP8.69□□□□□ -1.02
HMGN1P17-201ENST00000513734 ZNF831Q5JPB2 1677 aa8.69□□□□□ -1.02
HMGN1P17-201ENST00000513734 C8orf34Q49A92 452 aa8.68□□□□□ -1.02
HMGN1P17-201ENST00000513734 MSL1Q68DK7 614 aa8.68□□□□□ -1.02
HMGN1P17-201ENST00000513734 NLRP8Q86W28 1048 aa8.68□□□□□ -1.02
HMGN1P17-201ENST00000513734 COL23A1Q86Y22 540 aaPredicted RBP8.68□□□□□ -1.02
HMGN1P17-201ENST00000513734 PIGBQ92521 554 aa8.68□□□□□ -1.02
HMGN1P17-201ENST00000513734 TRIM47Q96LD4 638 aa8.68□□□□□ -1.02
HMGN1P17-201ENST00000513734 DMRTB1Q96MA1 342 aa8.68□□□□□ -1.02
HMGN1P17-201ENST00000513734 FAM129BQ96TA1 746 aa8.68□□□□□ -1.02
HMGN1P17-201ENST00000513734 KIAA1551Q9HCM1 1747 aa8.68□□□□□ -1.02
HMGN1P17-201ENST00000513734 N4BP2Q86UW6 1770 aaPredicted RBP8.68□□□□□ -1.02
HMGN1P17-201ENST00000513734 RBM47A0AV96 593 aaKnown RBP8.67□□□□□ -1.02
HMGN1P17-201ENST00000513734 SLC35F4A4IF30 521 aa8.67□□□□□ -1.02
HMGN1P17-201ENST00000513734 TREHO43280 583 aa8.67□□□□□ -1.02
HMGN1P17-201ENST00000513734 PHKG2P15735 406 aa8.67□□□□□ -1.02
HMGN1P17-201ENST00000513734 PLCB3Q01970 1234 aa8.67□□□□□ -1.02
HMGN1P17-201ENST00000513734 TYRO3Q06418 890 aa8.67□□□□□ -1.02
HMGN1P17-201ENST00000513734 Q6ZNB5 142 aa8.67□□□□□ -1.02
HMGN1P17-201ENST00000513734 CMTR1Q8N1G2 835 aaKnown RBP8.67□□□□□ -1.02
HMGN1P17-201ENST00000513734 GIPC2Q8TF65 315 aa8.67□□□□□ -1.02
HMGN1P17-201ENST00000513734 SYT17Q9BSW7 474 aa8.67□□□□□ -1.02
HMGN1P17-201ENST00000513734 TFCP2L1Q9NZI6 479 aa8.67□□□□□ -1.02
HMGN1P17-201ENST00000513734 ASAP1Q9ULH1 1129 aa8.67□□□□□ -1.02
HMGN1P17-201ENST00000513734 RTCBQ9Y3I0 505 aaKnown RBP8.67□□□□□ -1.02
HMGN1P17-201ENST00000513734 KIF13BQ9NQT8 1826 aa8.66□□□□□ -1.02
HMGN1P17-201ENST00000513734 SIPA1L3O60292 1781 aaPredicted RBP8.66□□□□□ -1.02
HMGN1P17-201ENST00000513734 ADAMTS7Q9UKP4 1686 aa8.66□□□□□ -1.02
HMGN1P17-201ENST00000513734 COL3A1P02461 1466 aaPredicted RBP8.66□□□□□ -1.02
HMGN1P17-201ENST00000513734 A6NHS1 94 aa8.66□□□□□ -1.02
HMGN1P17-201ENST00000513734 GPR182O15218 404 aa8.66□□□□□ -1.02
HMGN1P17-201ENST00000513734 CNGB1Q14028 1251 aaPredicted RBP8.66□□□□□ -1.02
HMGN1P17-201ENST00000513734 MORC1Q86VD1 984 aa8.66□□□□□ -1.02
HMGN1P17-201ENST00000513734 CCDC155Q8N6L0 562 aa8.66□□□□□ -1.02
HMGN1P17-201ENST00000513734 LINC00116Q8NCU8 138 aa8.66□□□□□ -1.02
HMGN1P17-201ENST00000513734 NLGN2Q8NFZ4 835 aa8.66□□□□□ -1.02
HMGN1P17-201ENST00000513734 NIF3L1Q9GZT8 377 aa8.66□□□□□ -1.02
HMGN1P17-201ENST00000513734 BRCA1P38398 1863 aaKnown RBP8.66□□□□□ -1.02
HMGN1P17-201ENST00000513734 UBR2Q8IWV8 1755 aa8.66□□□□□ -1.02
HMGN1P17-201ENST00000513734 KDRP35968 1356 aa8.65□□□□□ -1.02
HMGN1P17-201ENST00000513734 DLG5Q8TDM6 1919 aa8.65□□□□□ -1.02
HMGN1P17-201ENST00000513734 IGHA2P01877 340 aa8.65□□□□□ -1.02
HMGN1P17-201ENST00000513734 RPLP1P05386 114 aaKnown RBP8.65□□□□□ -1.02
HMGN1P17-201ENST00000513734 P4HBP07237 508 aaKnown RBP8.65□□□□□ -1.02
HMGN1P17-201ENST00000513734 SNRPBP14678 240 aaKnown RBP8.65□□□□□ -1.02
HMGN1P17-201ENST00000513734 ITPK1Q13572 414 aa8.65□□□□□ -1.02
HMGN1P17-201ENST00000513734 EAPPQ56P03 285 aaPredicted RBP8.65□□□□□ -1.02
HMGN1P17-201ENST00000513734 CC2D1BQ5T0F9 858 aaKnown RBP8.65□□□□□ -1.02
HMGN1P17-201ENST00000513734 ZCCHC2Q9C0B9 1178 aaKnown RBP8.65□□□□□ -1.02
HMGN1P17-201ENST00000513734 NUCKS1Q9H1E3 243 aaKnown RBP8.65□□□□□ -1.02
HMGN1P17-201ENST00000513734 BRD7Q9NPI1 651 aa8.65□□□□□ -1.02
HMGN1P17-201ENST00000513734 SPG7Q9UQ90 795 aa8.65□□□□□ -1.02
HMGN1P17-201ENST00000513734 CICQ96RK0 1608 aaPredicted RBP8.65□□□□□ -1.03
HMGN1P17-201ENST00000513734 MAP3K5Q99683 1374 aa8.64□□□□□ -1.03
HMGN1P17-201ENST00000513734 ATXN7O15265 892 aaPredicted RBP8.64□□□□□ -1.03
HMGN1P17-201ENST00000513734 THBS1P07996 1170 aa8.64□□□□□ -1.03
HMGN1P17-201ENST00000513734 EPB42P16452 691 aa8.64□□□□□ -1.03
HMGN1P17-201ENST00000513734 ZNF16P17020 682 aaPredicted RBP8.64□□□□□ -1.03
HMGN1P17-201ENST00000513734 YY1P25490 414 aa8.64□□□□□ -1.03
HMGN1P17-201ENST00000513734 IL13P35225 146 aa8.64□□□□□ -1.03
HMGN1P17-201ENST00000513734 MAPK8P45983 427 aa8.64□□□□□ -1.03
HMGN1P17-201ENST00000513734 TAGLNQ01995 201 aaKnown RBP8.64□□□□□ -1.03
HMGN1P17-201ENST00000513734 EHHADHQ08426 723 aa8.64□□□□□ -1.03
HMGN1P17-201ENST00000513734 DSC3Q14574 896 aa8.64□□□□□ -1.03
HMGN1P17-201ENST00000513734 LBRQ14739 615 aaKnown RBP8.64□□□□□ -1.03
HMGN1P17-201ENST00000513734 COL19A1Q14993 1142 aa8.64□□□□□ -1.03
HMGN1P17-201ENST00000513734 SAMD5Q5TGI4 173 aa8.64□□□□□ -1.03
HMGN1P17-201ENST00000513734 FIGNL1Q6PIW4 674 aa8.64□□□□□ -1.03
HMGN1P17-201ENST00000513734 FBXO33Q7Z6M2 555 aa8.64□□□□□ -1.03
HMGN1P17-201ENST00000513734 ATG3Q9NT62 314 aa8.64□□□□□ -1.03
HMGN1P17-201ENST00000513734 CUEDC1Q9NWM3 386 aaPredicted RBP8.64□□□□□ -1.03
HMGN1P17-201ENST00000513734 KNSTRNQ9Y448 316 aa8.64□□□□□ -1.03
HMGN1P17-201ENST00000513734 LOC102724428A0A0B4J2F2 783 aa8.63□□□□□ -1.03
HMGN1P17-201ENST00000513734 H7C1W4 665 aa8.63□□□□□ -1.03
HMGN1P17-201ENST00000513734 SIK1P57059 783 aa8.63□□□□□ -1.03
HMGN1P17-201ENST00000513734 FMR1Q06787 632 aaKnown RBP eCLIP8.63□□□□□ -1.03
HMGN1P17-201ENST00000513734 TRIP4Q15650 581 aaPredicted RBP8.63□□□□□ -1.03
HMGN1P17-201ENST00000513734 DBN1Q16643 649 aa8.63□□□□□ -1.03
HMGN1P17-201ENST00000513734 SULT6B1Q6IMI4 303 aa8.63□□□□□ -1.03
HMGN1P17-201ENST00000513734 ZNF530Q6P9A1 599 aaPredicted RBP8.63□□□□□ -1.03
HMGN1P17-201ENST00000513734 IFNL2Q8IZJ0 200 aa8.63□□□□□ -1.03
HMGN1P17-201ENST00000513734 TMOD3Q9NYL9 352 aa8.63□□□□□ -1.03
HMGN1P17-201ENST00000513734 FNDC3AQ9Y2H6 1198 aaKnown RBP8.63□□□□□ -1.03
HMGN1P17-201ENST00000513734 PCDHGC4Q9Y5F7 938 aa8.63□□□□□ -1.03
HMGN1P17-201ENST00000513734 KCNMB2Q9Y691 235 aa8.63□□□□□ -1.03
HMGN1P17-201ENST00000513734 AFDNP55196 1824 aaKnown RBP8.63□□□□□ -1.03
HMGN1P17-201ENST00000513734 DCDC2BA2VCK2 349 aa8.62□□□□□ -1.03
HMGN1P17-201ENST00000513734 UNCXA6NJT0 531 aa8.62□□□□□ -1.03
HMGN1P17-201ENST00000513734 KHNYNO15037 678 aaKnown RBP8.62□□□□□ -1.03
HMGN1P17-201ENST00000513734 GRNP28799 593 aaKnown RBP8.62□□□□□ -1.03
HMGN1P17-201ENST00000513734 MTHFSP49914 203 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms