RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 TAF5LO75529 589 aa15.24■□□□□ 0.03
SFXN1-210ENST00000513725 HOXB7P09629 217 aa15.24■□□□□ 0.03
SFXN1-210ENST00000513725 XRCC5P13010 732 aaKnown RBP15.24■□□□□ 0.03
SFXN1-210ENST00000513725 IGFBP4P22692 258 aa15.24■□□□□ 0.03
SFXN1-210ENST00000513725 ITGA6P23229 1130 aa15.24■□□□□ 0.03
SFXN1-210ENST00000513725 CCND3P30281 292 aaPredicted RBP15.24■□□□□ 0.03
SFXN1-210ENST00000513725 NHLH1Q02575 133 aa15.24■□□□□ 0.03
SFXN1-210ENST00000513725 PRDM12Q9H4Q4 367 aa15.24■□□□□ 0.03
SFXN1-210ENST00000513725 ZKSCAN1P17029 563 aaPredicted RBP15.23■□□□□ 0.03
SFXN1-210ENST00000513725 GCLCP48506 637 aaPredicted RBP15.23■□□□□ 0.03
SFXN1-210ENST00000513725 HDLBPQ00341 1268 aaKnown RBP15.23■□□□□ 0.03
SFXN1-210ENST00000513725 PLEKHF1Q96S99 279 aa15.23■□□□□ 0.03
SFXN1-210ENST00000513725 PICK1Q9NRD5 415 aa15.23■□□□□ 0.03
SFXN1-210ENST00000513725 AK9Q5TCS8 1911 aa15.23■□□□□ 0.03
SFXN1-210ENST00000513725 TEKT1Q969V4 418 aa15.22■□□□□ 0.03
SFXN1-210ENST00000513725 NUDT12Q9BQG2 462 aa15.22■□□□□ 0.03
SFXN1-210ENST00000513725 PNNQ9H307 717 aaKnown RBP15.22■□□□□ 0.03
SFXN1-210ENST00000513725 AGTPBP1Q9UPW5 1226 aa15.22■□□□□ 0.03
SFXN1-210ENST00000513725 AFG3L2Q9Y4W6 797 aa15.22■□□□□ 0.03
SFXN1-210ENST00000513725 PRR33A8MZF0 331 aa15.21■□□□□ 0.03
SFXN1-210ENST00000513725 DNM1LO00429 736 aa15.21■□□□□ 0.03
SFXN1-210ENST00000513725 KCNQ1P51787 676 aa15.21■□□□□ 0.03
SFXN1-210ENST00000513725 TFF2Q03403 129 aa15.21■□□□□ 0.03
SFXN1-210ENST00000513725 SOCS4Q8WXH5 440 aa15.21■□□□□ 0.03
SFXN1-210ENST00000513725 METTL22Q9BUU2 404 aaPredicted RBP15.21■□□□□ 0.03
SFXN1-210ENST00000513725 ADGRE1Q14246 886 aa15.2■□□□□ 0.02
SFXN1-210ENST00000513725 FAM151AQ8WW52 585 aa15.2■□□□□ 0.02
SFXN1-210ENST00000513725 ZDHHC15Q96MV8 337 aa15.2■□□□□ 0.02
SFXN1-210ENST00000513725 PDLIM7Q9NR12 457 aa15.2■□□□□ 0.02
SFXN1-210ENST00000513725 PLXNB2O15031 1838 aa15.2■□□□□ 0.02
SFXN1-210ENST00000513725 MYO9BQ13459 2157 aa15.19■□□□□ 0.02
SFXN1-210ENST00000513725 PTPRAP18433 802 aa15.19■□□□□ 0.02
SFXN1-210ENST00000513725 SLC39A5Q6ZMH5 540 aa15.19■□□□□ 0.02
SFXN1-210ENST00000513725 SCYL3Q8IZE3 742 aa15.19■□□□□ 0.02
SFXN1-210ENST00000513725 TDRD7Q8NHU6 1098 aaKnown RBP15.19■□□□□ 0.02
SFXN1-210ENST00000513725 FRMPD3Q5JV73 1810 aa15.18■□□□□ 0.02
SFXN1-210ENST00000513725 TRIM43BA6NCK2 446 aa15.18■□□□□ 0.02
SFXN1-210ENST00000513725 MSCO60682 206 aa15.18■□□□□ 0.02
SFXN1-210ENST00000513725 PPP2R1AP30153 589 aa15.18■□□□□ 0.02
SFXN1-210ENST00000513725 RIPK4P57078 832 aa15.18■□□□□ 0.02
SFXN1-210ENST00000513725 CCDC129Q6ZRS4 1044 aa15.18■□□□□ 0.02
SFXN1-210ENST00000513725 LPAR1Q92633 364 aa15.18■□□□□ 0.02
SFXN1-210ENST00000513725 TRIM43Q96BQ3 446 aaPredicted RBP15.18■□□□□ 0.02
SFXN1-210ENST00000513725 KCNH6Q9H252 994 aa15.18■□□□□ 0.02
SFXN1-210ENST00000513725 PHAXQ9H814 394 aaKnown RBP15.18■□□□□ 0.02
SFXN1-210ENST00000513725 TRIM75PA6NK02 468 aa15.17■□□□□ 0.02
SFXN1-210ENST00000513725 PI4K2BG5E9Z4 385 aa15.17■□□□□ 0.02
SFXN1-210ENST00000513725 DDX58O95786 925 aaKnown RBP15.17■□□□□ 0.02
SFXN1-210ENST00000513725 EPHB4P54760 987 aa15.17■□□□□ 0.02
SFXN1-210ENST00000513725 LMOD3Q0VAK6 560 aa15.17■□□□□ 0.02
SFXN1-210ENST00000513725 TRIM60Q495X7 471 aa15.17■□□□□ 0.02
SFXN1-210ENST00000513725 SH3RF1Q7Z6J0 888 aa15.17■□□□□ 0.02
SFXN1-210ENST00000513725 MRIQ9BWK5 157 aa15.17■□□□□ 0.02
SFXN1-210ENST00000513725 PTPRFP10586 1907 aa15.16■□□□□ 0.02
SFXN1-210ENST00000513725 ANKRD18BA2A2Z9 1011 aa15.16■□□□□ 0.02
SFXN1-210ENST00000513725 CHL1O00533 1208 aa15.16■□□□□ 0.02
SFXN1-210ENST00000513725 ERC2O15083 957 aa15.16■□□□□ 0.02
SFXN1-210ENST00000513725 PABPC4Q13310 644 aaKnown RBP eCLIP15.16■□□□□ 0.02
SFXN1-210ENST00000513725 SKIV2LQ15477 1246 aaKnown RBP15.16■□□□□ 0.02
SFXN1-210ENST00000513725 TREML2Q5T2D2 321 aa15.16■□□□□ 0.02
SFXN1-210ENST00000513725 APOBEC3HQ6NTF7 200 aaKnown RBP15.16■□□□□ 0.02
SFXN1-210ENST00000513725 KHSRPQ92945 711 aaKnown RBP eCLIP15.16■□□□□ 0.022e-7■■□□□ 13.3
SFXN1-210ENST00000513725 DDX20Q9UHI6 824 aaKnown RBP15.16■□□□□ 0.02
SFXN1-210ENST00000513725 ST18O60284 1047 aa15.15■□□□□ 0.02
SFXN1-210ENST00000513725 HIBADHP31937 336 aaKnown RBP15.15■□□□□ 0.02
SFXN1-210ENST00000513725 RGS2P41220 211 aa15.15■□□□□ 0.02
SFXN1-210ENST00000513725 FPGSQ05932 587 aa15.15■□□□□ 0.02
SFXN1-210ENST00000513725 GRIK5Q16478 980 aa15.15■□□□□ 0.02
SFXN1-210ENST00000513725 TBC1D22AQ8WUA7 517 aa15.15■□□□□ 0.02
SFXN1-210ENST00000513725 UIMC1Q96RL1 719 aa15.15■□□□□ 0.02
SFXN1-210ENST00000513725 PBX4Q9BYU1 374 aa15.15■□□□□ 0.02
SFXN1-210ENST00000513725 SPINK5Q9NQ38 1064 aaPredicted RBP15.15■□□□□ 0.02
SFXN1-210ENST00000513725 LAS1LQ9Y4W2 734 aaKnown RBP15.15■□□□□ 0.02
SFXN1-210ENST00000513725 TACC3Q9Y6A5 838 aa15.15■□□□□ 0.02
SFXN1-210ENST00000513725 RLFQ13129 1914 aa15.15■□□□□ 0.02
SFXN1-210ENST00000513725 MYBBP1AQ9BQG0 1328 aaKnown RBP15.15■□□□□ 0.02
SFXN1-210ENST00000513725 TCP10Q12799 353 aa15.14■□□□□ 0.01
SFXN1-210ENST00000513725 SNX17Q15036 470 aa15.14■□□□□ 0.01
SFXN1-210ENST00000513725 CCL14Q16627 93 aa15.14■□□□□ 0.01
SFXN1-210ENST00000513725 UBE3BQ7Z3V4 1068 aa15.14■□□□□ 0.01
SFXN1-210ENST00000513725 MICALL1Q8N3F8 863 aa15.14■□□□□ 0.01
SFXN1-210ENST00000513725 PROCA1Q8NCQ7 364 aaPredicted RBP15.14■□□□□ 0.01
SFXN1-210ENST00000513725 ARRDC4Q8NCT1 418 aa15.14■□□□□ 0.01
SFXN1-210ENST00000513725 HERVK_113Q902F9 699 aa15.14■□□□□ 0.01
SFXN1-210ENST00000513725 FBXL18Q96ME1 805 aa15.14■□□□□ 0.01
SFXN1-210ENST00000513725 MORF4L1Q9UBU8 362 aa15.14■□□□□ 0.01
SFXN1-210ENST00000513725 CHD9Q3L8U1 2897 aa15.13■□□□□ 0.01
SFXN1-210ENST00000513725 PHF20L1A8MW92 1017 aa15.13■□□□□ 0.01
SFXN1-210ENST00000513725 KBTBD13C9JR72 458 aa15.13■□□□□ 0.01
SFXN1-210ENST00000513725 CSF1RP07333 972 aa15.13■□□□□ 0.01
SFXN1-210ENST00000513725 RAG1P15918 1043 aa15.13■□□□□ 0.01
SFXN1-210ENST00000513725 CNGA1P29973 690 aa15.13■□□□□ 0.01
SFXN1-210ENST00000513725 PBX2P40425 430 aa15.13■□□□□ 0.01
SFXN1-210ENST00000513725 NEXNQ0ZGT2 675 aa15.13■□□□□ 0.01
SFXN1-210ENST00000513725 DUSP27Q5VZP5 1158 aa15.13■□□□□ 0.01
SFXN1-210ENST00000513725 MFSD14CQ5VZR4 134 aa15.13■□□□□ 0.01
SFXN1-210ENST00000513725 PLA2G12BQ9BX93 195 aa15.13■□□□□ 0.01
SFXN1-210ENST00000513725 MAP3K2Q9Y2U5 619 aa15.13■□□□□ 0.01
SFXN1-210ENST00000513725 REV3LO60673 3130 aa15.13■□□□□ 0.01
SFXN1-210ENST00000513725 A0A1B0GUL6 1792 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms