RNA–Protein interactions for RNA: ENST00000513632.2

PABPC4-218, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 2

Gene PABPC4, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-218	ENST00000513632	UBXN2A	P68543	259 aa		11.23	□□□□□ -0.61
PABPC4-218	ENST00000513632	SCYL3	Q8IZE3	742 aa		11.23	□□□□□ -0.61
PABPC4-218	ENST00000513632	ARHGAP45	Q92619	1136 aa		11.23	□□□□□ -0.61
PABPC4-218	ENST00000513632	FAM163A	Q96GL9	167 aa	Predicted RBP	11.23	□□□□□ -0.61
PABPC4-218	ENST00000513632	NEUROD6	Q96NK8	337 aa		11.23	□□□□□ -0.61
PABPC4-218	ENST00000513632	ZHX2	Q9Y6X8	837 aa		11.23	□□□□□ -0.61
PABPC4-218	ENST00000513632		A0A1B0GUL7	405 aa		11.22	□□□□□ -0.61
PABPC4-218	ENST00000513632	CTNND1	O60716	968 aa	Known RBP	11.22	□□□□□ -0.61
PABPC4-218	ENST00000513632	OSBP	P22059	807 aa		11.22	□□□□□ -0.61
PABPC4-218	ENST00000513632	GSTO1	P78417	241 aa		11.22	□□□□□ -0.61
PABPC4-218	ENST00000513632	PICALM	Q13492	652 aa		11.22	□□□□□ -0.61
PABPC4-218	ENST00000513632	PDS5A	Q29RF7	1337 aa	Known RBP	11.22	□□□□□ -0.61
PABPC4-218	ENST00000513632	GADL1	Q6ZQY3	521 aa		11.22	□□□□□ -0.61
PABPC4-218	ENST00000513632	MYPN	Q86TC9	1320 aa		11.22	□□□□□ -0.61
PABPC4-218	ENST00000513632	ZFPM1	Q8IX07	1006 aa		11.22	□□□□□ -0.61
PABPC4-218	ENST00000513632	XAGE2	Q96GT9	111 aa		11.22	□□□□□ -0.61
PABPC4-218	ENST00000513632	MEIS3	Q99687	375 aa		11.22	□□□□□ -0.61
PABPC4-218	ENST00000513632	ECM29	Q5VYK3	1845 aa		11.21	□□□□□ -0.61
PABPC4-218	ENST00000513632	GAK	O14976	1311 aa		11.21	□□□□□ -0.61
PABPC4-218	ENST00000513632	PHF20L1	A8MW92	1017 aa		11.21	□□□□□ -0.61
PABPC4-218	ENST00000513632	MAP4K4	O95819	1239 aa	Predicted RBP	11.21	□□□□□ -0.61
PABPC4-218	ENST00000513632	PTPRA	P18433	802 aa		11.21	□□□□□ -0.61
PABPC4-218	ENST00000513632	ADORA1	P30542	326 aa		11.21	□□□□□ -0.61
PABPC4-218	ENST00000513632	BTD	P43251	543 aa		11.21	□□□□□ -0.61
PABPC4-218	ENST00000513632	RARS	P54136	660 aa	Known RBP	11.21	□□□□□ -0.61
PABPC4-218	ENST00000513632	TFCP2	Q12800	502 aa		11.21	□□□□□ -0.61
PABPC4-218	ENST00000513632	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
PABPC4-218	ENST00000513632	RASGRF1	Q13972	1273 aa		11.21	□□□□□ -0.61
PABPC4-218	ENST00000513632	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.21	□□□□□ -0.61
PABPC4-218	ENST00000513632	DPF3	Q92784	378 aa		11.21	□□□□□ -0.61
PABPC4-218	ENST00000513632	FOXD4L1	Q9NU39	408 aa		11.21	□□□□□ -0.61
PABPC4-218	ENST00000513632	SLC45A1	Q9Y2W3	748 aa		11.21	□□□□□ -0.61
PABPC4-218	ENST00000513632	MROH7-TTC4	A0A0A0MT08	1334 aa		11.2	□□□□□ -0.62
PABPC4-218	ENST00000513632		A0A0G2JLL6	359 aa	Predicted RBP	11.2	□□□□□ -0.62
PABPC4-218	ENST00000513632	CYP2C8	P10632	490 aa		11.2	□□□□□ -0.62
PABPC4-218	ENST00000513632	MAP3K10	Q02779	954 aa		11.2	□□□□□ -0.62
PABPC4-218	ENST00000513632	GPAT2	Q6NUI2	795 aa		11.2	□□□□□ -0.62
PABPC4-218	ENST00000513632	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.2	□□□□□ -0.62
PABPC4-218	ENST00000513632	SLAIN1	Q8ND83	568 aa		11.2	□□□□□ -0.62
PABPC4-218	ENST00000513632	NOL10	Q9BSC4	688 aa	Known RBP	11.2	□□□□□ -0.62
PABPC4-218	ENST00000513632	HTATIP2	Q9BUP3	242 aa		11.2	□□□□□ -0.62
PABPC4-218	ENST00000513632	RNF208	Q9H0X6	261 aa		11.2	□□□□□ -0.62
PABPC4-218	ENST00000513632	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
PABPC4-218	ENST00000513632	AFG3L2	Q9Y4W6	797 aa		11.2	□□□□□ -0.62
PABPC4-218	ENST00000513632		A0A1B0GUL6	1792 aa		11.19	□□□□□ -0.62
PABPC4-218	ENST00000513632	GPR75-ASB3	A0A0A6YYF3	556 aa		11.19	□□□□□ -0.62
PABPC4-218	ENST00000513632	DDTL	A6NHG4	134 aa	Predicted RBP	11.19	□□□□□ -0.62
PABPC4-218	ENST00000513632	TBC1D12	O60347	775 aa		11.19	□□□□□ -0.62
PABPC4-218	ENST00000513632	GNAI2	P04899	355 aa		11.19	□□□□□ -0.62
PABPC4-218	ENST00000513632	GJB1	P08034	283 aa		11.19	□□□□□ -0.62
PABPC4-218	ENST00000513632	UQCRFS1P1	P0C7P4	283 aa		11.19	□□□□□ -0.62
PABPC4-218	ENST00000513632	BCR	P11274	1271 aa		11.19	□□□□□ -0.62
PABPC4-218	ENST00000513632	CAPN2	P17655	700 aa		11.19	□□□□□ -0.62
PABPC4-218	ENST00000513632	MECOM	Q03112	1051 aa		11.19	□□□□□ -0.62
PABPC4-218	ENST00000513632	MTX1	Q13505	466 aa		11.19	□□□□□ -0.62
PABPC4-218	ENST00000513632	MOGS	Q13724	837 aa		11.19	□□□□□ -0.62
PABPC4-218	ENST00000513632	MTFR1	Q15390	333 aa		11.19	□□□□□ -0.62
PABPC4-218	ENST00000513632	TBC1D2	Q9BYX2	928 aa		11.19	□□□□□ -0.62
PABPC4-218	ENST00000513632	RAI14	Q9P0K7	980 aa		11.19	□□□□□ -0.62
PABPC4-218	ENST00000513632	LRP2BP	Q9P2M1	347 aa		11.19	□□□□□ -0.62
PABPC4-218	ENST00000513632	PNMA3	Q9UL41	463 aa		11.19	□□□□□ -0.62
PABPC4-218	ENST00000513632	ADGRA2	Q96PE1	1338 aa		11.18	□□□□□ -0.62
PABPC4-218	ENST00000513632	TRIM75P	A6NK02	468 aa		11.18	□□□□□ -0.62
PABPC4-218	ENST00000513632	CCER2	I3L3R5	266 aa		11.18	□□□□□ -0.62
PABPC4-218	ENST00000513632	CCL5	P13501	91 aa		11.18	□□□□□ -0.62
PABPC4-218	ENST00000513632	CTGF	P29279	349 aa		11.18	□□□□□ -0.62
PABPC4-218	ENST00000513632	GJA8	P48165	433 aa		11.18	□□□□□ -0.62
PABPC4-218	ENST00000513632	PRKCZ	Q05513	592 aa		11.18	□□□□□ -0.62
PABPC4-218	ENST00000513632	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
PABPC4-218	ENST00000513632	SH3BP5L	Q7L8J4	393 aa		11.18	□□□□□ -0.62
PABPC4-218	ENST00000513632	SPATA5	Q8NB90	893 aa		11.18	□□□□□ -0.62
PABPC4-218	ENST00000513632	FRAT1	Q92837	279 aa	Predicted RBP	11.18	□□□□□ -0.62
PABPC4-218	ENST00000513632	COA7	Q96BR5	231 aa		11.18	□□□□□ -0.62
PABPC4-218	ENST00000513632	OSBPL5	Q9H0X9	879 aa	Predicted RBP	11.18	□□□□□ -0.62
PABPC4-218	ENST00000513632	HMG20B	Q9P0W2	317 aa		11.18	□□□□□ -0.62
PABPC4-218	ENST00000513632	AGTPBP1	Q9UPW5	1226 aa		11.18	□□□□□ -0.62
PABPC4-218	ENST00000513632	TNRC18	O15417	2968 aa	Predicted RBP	11.17	□□□□□ -0.62
PABPC4-218	ENST00000513632	TNPO2	O14787	897 aa	Known RBP	11.17	□□□□□ -0.62
PABPC4-218	ENST00000513632	ADCY3	O60266	1144 aa		11.17	□□□□□ -0.62
PABPC4-218	ENST00000513632	BAG3	O95817	575 aa		11.17	□□□□□ -0.62
PABPC4-218	ENST00000513632	CCDC158	Q5M9N0	1113 aa		11.17	□□□□□ -0.62
PABPC4-218	ENST00000513632	ATF7IP	Q6VMQ6	1270 aa		11.17	□□□□□ -0.62
PABPC4-218	ENST00000513632	AS3MT	Q9HBK9	375 aa		11.17	□□□□□ -0.62
PABPC4-218	ENST00000513632	DDX4	Q9NQI0	724 aa	Known RBP	11.17	□□□□□ -0.62
PABPC4-218	ENST00000513632	COLQ	Q9Y215	455 aa	Predicted RBP	11.17	□□□□□ -0.62
PABPC4-218	ENST00000513632	NR2E3	Q9Y5X4	410 aa		11.17	□□□□□ -0.62
PABPC4-218	ENST00000513632	ARAP2	Q8WZ64	1704 aa		11.16	□□□□□ -0.62
PABPC4-218	ENST00000513632		H0YGN5	161 aa		11.16	□□□□□ -0.62
PABPC4-218	ENST00000513632	TFRC	P02786	760 aa	Known RBP	11.16	□□□□□ -0.62
PABPC4-218	ENST00000513632	PLCG2	P16885	1265 aa		11.16	□□□□□ -0.62
PABPC4-218	ENST00000513632	ARID4A	P29374	1257 aa	Predicted RBP	11.16	□□□□□ -0.62
PABPC4-218	ENST00000513632	FLT3LG	P49771	235 aa		11.16	□□□□□ -0.62
PABPC4-218	ENST00000513632	RHBDL3	P58872	404 aa		11.16	□□□□□ -0.62
PABPC4-218	ENST00000513632	OS9	Q13438	667 aa	Predicted RBP	11.16	□□□□□ -0.62
PABPC4-218	ENST00000513632	TEX11	Q8IYF3	940 aa		11.16	□□□□□ -0.62
PABPC4-218	ENST00000513632	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.16	□□□□□ -0.62
PABPC4-218	ENST00000513632	PXYLP1	Q8TE99	480 aa		11.16	□□□□□ -0.62
PABPC4-218	ENST00000513632	NSUN4	Q96CB9	384 aa	Known RBP	11.16	□□□□□ -0.62
PABPC4-218	ENST00000513632	TRIM34	Q9BYJ4	488 aa		11.16	□□□□□ -0.62
PABPC4-218	ENST00000513632	GABRQ	Q9UN88	632 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms