RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 VPS37DQ86XT2 251 aa14.17□□□□□ -0.14
RNF4-218ENST00000513284 SUCLG2Q96I99 432 aa14.17□□□□□ -0.14
RNF4-218ENST00000513284 UBE2OQ9C0C9 1292 aaKnown RBP14.17□□□□□ -0.14
RNF4-218ENST00000513284 SLC45A1Q9Y2W3 748 aa14.17□□□□□ -0.14
RNF4-218ENST00000513284 MROH5Q6ZUA9 1318 aa14.16□□□□□ -0.14
RNF4-218ENST00000513284 MAP3K10Q02779 954 aa14.16□□□□□ -0.14
RNF4-218ENST00000513284 GADL1Q6ZQY3 521 aa14.16□□□□□ -0.14
RNF4-218ENST00000513284 WWC1Q8IX03 1113 aa14.16□□□□□ -0.14
RNF4-218ENST00000513284 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.16□□□□□ -0.14
RNF4-218ENST00000513284 TAOK2Q9UL54 1235 aa14.16□□□□□ -0.14
RNF4-218ENST00000513284 OGDHLQ9ULD0 1010 aa14.16□□□□□ -0.14
RNF4-218ENST00000513284 DAGLAQ9Y4D2 1042 aa14.16□□□□□ -0.14
RNF4-218ENST00000513284 PFASO15067 1338 aa14.15□□□□□ -0.14
RNF4-218ENST00000513284 RPTORQ8N122 1335 aa14.15□□□□□ -0.14
RNF4-218ENST00000513284 FRAT2O75474 233 aaPredicted RBP14.15□□□□□ -0.14
RNF4-218ENST00000513284 PDE8BO95263 885 aa14.15□□□□□ -0.14
RNF4-218ENST00000513284 DIXDC1Q155Q3 683 aa14.15□□□□□ -0.14
RNF4-218ENST00000513284 CAVIN4Q5BKX8 364 aa14.15□□□□□ -0.14
RNF4-218ENST00000513284 FAM109BQ6ICB4 259 aaPredicted RBP14.15□□□□□ -0.14
RNF4-218ENST00000513284 SH3BP5LQ7L8J4 393 aa14.15□□□□□ -0.14
RNF4-218ENST00000513284 SCYL3Q8IZE3 742 aa14.15□□□□□ -0.14
RNF4-218ENST00000513284 ANKRD13CQ8N6S4 541 aa14.15□□□□□ -0.14
RNF4-218ENST00000513284 C11orf49Q9H6J7 331 aa14.15□□□□□ -0.14
RNF4-218ENST00000513284 FGFR2P21802 821 aa14.14□□□□□ -0.15
RNF4-218ENST00000513284 TREML2Q5T2D2 321 aa14.14□□□□□ -0.15
RNF4-218ENST00000513284 CCDC84Q86UT8 332 aaPredicted RBP14.14□□□□□ -0.15
RNF4-218ENST00000513284 COA7Q96BR5 231 aa14.14□□□□□ -0.15
RNF4-218ENST00000513284 HMX1Q9NP08 348 aaPredicted RBP14.14□□□□□ -0.15
RNF4-218ENST00000513284 PRDM6Q9NQX0 595 aa14.14□□□□□ -0.15
RNF4-218ENST00000513284 NBPF7P0C2Y1 421 aaPredicted RBP14.13□□□□□ -0.15
RNF4-218ENST00000513284 COL6A1P12109 1028 aa14.13□□□□□ -0.15
RNF4-218ENST00000513284 CCDC27Q2M243 656 aa14.13□□□□□ -0.15
RNF4-218ENST00000513284 FAM161BQ96MY7 647 aa14.13□□□□□ -0.15
RNF4-218ENST00000513284 USP40Q9NVE5 1235 aa14.13□□□□□ -0.15
RNF4-218ENST00000513284 C9orf78Q9NZ63 289 aaPredicted RBP14.13□□□□□ -0.15
RNF4-218ENST00000513284 AK9Q5TCS8 1911 aa14.13□□□□□ -0.15
RNF4-218ENST00000513284 MAST3O60307 1309 aa14.13□□□□□ -0.15
RNF4-218ENST00000513284 DDX60LQ5H9U9 1706 aaKnown RBP14.12□□□□□ -0.15
RNF4-218ENST00000513284 PTPRFP10586 1907 aa14.12□□□□□ -0.15
RNF4-218ENST00000513284 HMGCRP04035 888 aa14.12□□□□□ -0.15
RNF4-218ENST00000513284 MDM2Q00987 491 aaPredicted RBP14.12□□□□□ -0.15
RNF4-218ENST00000513284 LRRC26Q2I0M4 334 aa14.12□□□□□ -0.15
RNF4-218ENST00000513284 METTL24Q5JXM2 366 aa14.12□□□□□ -0.15
RNF4-218ENST00000513284 MAP3K21Q5TCX8 1036 aa14.12□□□□□ -0.15
RNF4-218ENST00000513284 KLHDC4Q8TBB5 520 aa14.12□□□□□ -0.15
RNF4-218ENST00000513284 SMCR8Q8TEV9 937 aaPredicted RBP14.12□□□□□ -0.15
RNF4-218ENST00000513284 PHIPQ8WWQ0 1821 aa14.12□□□□□ -0.15
RNF4-218ENST00000513284 COL2A1P02458 1487 aaPredicted RBP14.12□□□□□ -0.15
RNF4-218ENST00000513284 MUC3AQ02505 3323 aa14.12□□□□□ -0.15
RNF4-218ENST00000513284 CACNA1FO60840 1977 aa14.11□□□□□ -0.15
RNF4-218ENST00000513284 DDTLA6NHG4 134 aaPredicted RBP14.11□□□□□ -0.15
RNF4-218ENST00000513284 TRIM75PA6NK02 468 aa14.11□□□□□ -0.15
RNF4-218ENST00000513284 PRDX5P30044 214 aa14.11□□□□□ -0.15
RNF4-218ENST00000513284 FAM110CQ1W6H9 321 aa14.11□□□□□ -0.15
RNF4-218ENST00000513284 RABL6Q3YEC7 729 aaPredicted RBP14.11□□□□□ -0.15
RNF4-218ENST00000513284 ANKRD44Q8N8A2 993 aa14.11□□□□□ -0.15
RNF4-218ENST00000513284 TRIB2Q92519 343 aa14.11□□□□□ -0.15
RNF4-218ENST00000513284 PRKRIP1Q9H875 184 aaPredicted RBP14.11□□□□□ -0.15
RNF4-218ENST00000513284 PICK1Q9NRD5 415 aa14.11□□□□□ -0.15
RNF4-218ENST00000513284 AGTPBP1Q9UPW5 1226 aa14.11□□□□□ -0.15
RNF4-218ENST00000513284 PLXNB2O15031 1838 aa14.11□□□□□ -0.15
RNF4-218ENST00000513284 ALDH1L1O75891 902 aa14.1□□□□□ -0.15
RNF4-218ENST00000513284 RGS3P49796 1198 aa14.1□□□□□ -0.15
RNF4-218ENST00000513284 EXOSC9Q06265 439 aaKnown RBP14.1□□□□□ -0.15
RNF4-218ENST00000513284 LHX8Q68G74 356 aa14.1□□□□□ -0.15
RNF4-218ENST00000513284 WDR66Q8TBY9 1149 aa14.1□□□□□ -0.15
RNF4-218ENST00000513284 IDI2Q9BXS1 227 aa14.1□□□□□ -0.15
RNF4-218ENST00000513284 BICC1Q9H694 974 aaKnown RBP14.1□□□□□ -0.15
RNF4-218ENST00000513284 UTYO14607 1347 aa14.1□□□□□ -0.15
RNF4-218ENST00000513284 IL16Q14005 1332 aa14.1□□□□□ -0.15
RNF4-218ENST00000513284 FANCIQ9NVI1 1328 aa14.1□□□□□ -0.15
RNF4-218ENST00000513284 PEX10O60683 326 aa14.09□□□□□ -0.15
RNF4-218ENST00000513284 CTNND1O60716 968 aaKnown RBP14.09□□□□□ -0.15
RNF4-218ENST00000513284 CDX2Q99626 313 aaPredicted RBP14.09□□□□□ -0.15
RNF4-218ENST00000513284 DDX4Q9NQI0 724 aaKnown RBP14.09□□□□□ -0.15
RNF4-218ENST00000513284 KIF16BQ96L93 1317 aa14.09□□□□□ -0.15
RNF4-218ENST00000513284 ENTPD3O75355 529 aa14.08□□□□□ -0.16
RNF4-218ENST00000513284 CCDC184Q52MB2 194 aa14.08□□□□□ -0.16
RNF4-218ENST00000513284 CDH23Q9H251 3354 aa14.08□□□□□ -0.16
RNF4-218ENST00000513284 CYP2B6P20813 491 aa14.07□□□□□ -0.16
RNF4-218ENST00000513284 RRP1BQ14684 758 aaKnown RBP14.07□□□□□ -0.16
RNF4-218ENST00000513284 SLC4A10Q6U841 1118 aa14.07□□□□□ -0.16
RNF4-218ENST00000513284 SRCIN1Q9C0H9 1055 aa14.07□□□□□ -0.16
RNF4-218ENST00000513284 SEMA6BQ9H3T3 888 aa14.07□□□□□ -0.16
RNF4-218ENST00000513284 SPINK5Q9NQ38 1064 aaPredicted RBP14.07□□□□□ -0.16
RNF4-218ENST00000513284 LRRFIP2Q9Y608 721 aaKnown RBP14.07□□□□□ -0.16
RNF4-218ENST00000513284 RFX7Q2KHR2 1363 aa14.07□□□□□ -0.16
RNF4-218ENST00000513284 IFIT1P09914 478 aaKnown RBP14.06□□□□□ -0.16
RNF4-218ENST00000513284 PRKAR2AP13861 404 aaKnown RBP14.06□□□□□ -0.16
RNF4-218ENST00000513284 CCND3P30281 292 aaPredicted RBP14.06□□□□□ -0.16
RNF4-218ENST00000513284 RFX5P48382 616 aaPredicted RBP14.06□□□□□ -0.16
RNF4-218ENST00000513284 GCLCP48506 637 aaPredicted RBP14.06□□□□□ -0.16
RNF4-218ENST00000513284 CACNB2Q08289 660 aaPredicted RBP14.06□□□□□ -0.16
RNF4-218ENST00000513284 SPP2Q13103 211 aa14.06□□□□□ -0.16
RNF4-218ENST00000513284 PUM3Q15397 648 aaKnown RBP14.06□□□□□ -0.16
RNF4-218ENST00000513284 PROCA1Q8NCQ7 364 aaPredicted RBP14.06□□□□□ -0.16
RNF4-218ENST00000513284 USP6NLQ92738 828 aa14.06□□□□□ -0.16
RNF4-218ENST00000513284 ASCC2Q9H1I8 757 aaPredicted RBP14.06□□□□□ -0.16
RNF4-218ENST00000513284 MORF4L1Q9UBU8 362 aa14.06□□□□□ -0.16
RNF4-218ENST00000513284 FAM196BA6NMK8 535 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms