RNA–Protein interactions for RNA: ENST00000513009.5

SDHC-208, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-208ENST00000513009 PRMT6Q96LA8 375 aaPredicted RBP10.47□□□□□ -0.73
SDHC-208ENST00000513009 PTPN18Q99952 460 aa10.47□□□□□ -0.73
SDHC-208ENST00000513009 EN2P19622 333 aaPredicted RBP10.46□□□□□ -0.73
SDHC-208ENST00000513009 ZNF804AQ7Z570 1209 aa10.46□□□□□ -0.73
SDHC-208ENST00000513009 ZNF333Q96JL9 665 aa10.46□□□□□ -0.73
SDHC-208ENST00000513009 PCDHAC2Q9Y5I4 1007 aa10.46□□□□□ -0.73
SDHC-208ENST00000513009 ARAP2Q8WZ64 1704 aa10.46□□□□□ -0.74
SDHC-208ENST00000513009 CLRN2A0PK11 232 aa10.45□□□□□ -0.74
SDHC-208ENST00000513009 ANKRD18BA2A2Z9 1011 aa10.45□□□□□ -0.74
SDHC-208ENST00000513009 VAMP4O75379 141 aa10.45□□□□□ -0.74
SDHC-208ENST00000513009 CAP1Q01518 475 aa10.45□□□□□ -0.74
SDHC-208ENST00000513009 TNFAIP1Q13829 316 aa10.45□□□□□ -0.74
SDHC-208ENST00000513009 RASA3Q14644 834 aa10.45□□□□□ -0.74
SDHC-208ENST00000513009 ARHGEF6Q15052 776 aa10.45□□□□□ -0.74
SDHC-208ENST00000513009 G2E3Q7L622 706 aa10.45□□□□□ -0.74
SDHC-208ENST00000513009 LINS1Q8NG48 757 aa10.45□□□□□ -0.74
SDHC-208ENST00000513009 VEZTQ9HBM0 779 aa10.45□□□□□ -0.74
SDHC-208ENST00000513009 AOX1Q06278 1338 aa10.44□□□□□ -0.74
SDHC-208ENST00000513009 FAM205AQ6ZU69 1335 aa10.44□□□□□ -0.74
SDHC-208ENST00000513009 F8W031 263 aaPredicted RBP10.44□□□□□ -0.74
SDHC-208ENST00000513009 SNAP23O00161 211 aa10.44□□□□□ -0.74
SDHC-208ENST00000513009 TAF5LO75529 589 aa10.44□□□□□ -0.74
SDHC-208ENST00000513009 NBPF11Q86T75 865 aa10.44□□□□□ -0.74
SDHC-208ENST00000513009 OPTNQ96CV9 577 aa10.44□□□□□ -0.74
SDHC-208ENST00000513009 FLIIQ13045 1269 aa10.43□□□□□ -0.74
SDHC-208ENST00000513009 IFIT5Q13325 482 aaKnown RBP10.43□□□□□ -0.74
SDHC-208ENST00000513009 SLC9C1Q4G0N8 1177 aa10.43□□□□□ -0.74
SDHC-208ENST00000513009 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.43□□□□□ -0.74
SDHC-208ENST00000513009 HELBQ8NG08 1087 aaPredicted RBP10.43□□□□□ -0.74
SDHC-208ENST00000513009 DNAAF4Q8WXU2 420 aa10.43□□□□□ -0.74
SDHC-208ENST00000513009 BRI3BPQ8WY22 251 aa10.43□□□□□ -0.74
SDHC-208ENST00000513009 TEPSINQ96N21 525 aa10.43□□□□□ -0.74
SDHC-208ENST00000513009 ELP3Q9H9T3 547 aa10.43□□□□□ -0.74
SDHC-208ENST00000513009 ZFYVE28Q9HCC9 887 aa10.43□□□□□ -0.74
SDHC-208ENST00000513009 SERPINA10Q9UK55 444 aa10.43□□□□□ -0.74
SDHC-208ENST00000513009 HTTP42858 3142 aa10.43□□□□□ -0.74
SDHC-208ENST00000513009 CT47B1P0C2W7 299 aaPredicted RBP10.42□□□□□ -0.74
SDHC-208ENST00000513009 GTF2A2P52657 109 aa10.42□□□□□ -0.74
SDHC-208ENST00000513009 RBM5P52756 815 aaKnown RBP eCLIP10.42□□□□□ -0.74
SDHC-208ENST00000513009 FOXO4P98177 505 aa10.42□□□□□ -0.74
SDHC-208ENST00000513009 HNRNPUQ00839 825 aaKnown RBP eCLIP10.42□□□□□ -0.74
SDHC-208ENST00000513009 SLFN5Q08AF3 891 aa10.42□□□□□ -0.74
SDHC-208ENST00000513009 TAF1CQ15572 869 aaPredicted RBP10.42□□□□□ -0.74
SDHC-208ENST00000513009 ZNF70Q9UC06 446 aaPredicted RBP10.42□□□□□ -0.74
SDHC-208ENST00000513009 PTCH2Q9Y6C5 1203 aa10.42□□□□□ -0.74
SDHC-208ENST00000513009 CCL15-CCL14A0A0B4J2E2 113 aa10.41□□□□□ -0.74
SDHC-208ENST00000513009 PPP4CP60510 307 aa10.41□□□□□ -0.74
SDHC-208ENST00000513009 VGLL4Q14135 290 aa10.41□□□□□ -0.74
SDHC-208ENST00000513009 CCL15Q16663 113 aa10.41□□□□□ -0.74
SDHC-208ENST00000513009 MFSD14BQ5SR56 506 aa10.41□□□□□ -0.74
SDHC-208ENST00000513009 SLC4A10Q6U841 1118 aa10.41□□□□□ -0.74
SDHC-208ENST00000513009 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.41□□□□□ -0.74
SDHC-208ENST00000513009 TDRD7Q8NHU6 1098 aaKnown RBP10.41□□□□□ -0.74
SDHC-208ENST00000513009 TDRD3Q9H7E2 651 aaKnown RBP10.41□□□□□ -0.74
SDHC-208ENST00000513009 ZCCHC17Q9NP64 241 aaKnown RBP10.41□□□□□ -0.74
SDHC-208ENST00000513009 C9orf78Q9NZ63 289 aaPredicted RBP10.41□□□□□ -0.74
SDHC-208ENST00000513009 TTF2Q9UNY4 1162 aaKnown RBP10.41□□□□□ -0.74
SDHC-208ENST00000513009 ZSWIM8A7E2V4 1837 aa10.41□□□□□ -0.74
SDHC-208ENST00000513009 SPDYE5A6NIY4 337 aa10.4□□□□□ -0.74
SDHC-208ENST00000513009 TLR2O60603 784 aa10.4□□□□□ -0.74
SDHC-208ENST00000513009 WDHD1O75717 1129 aaPredicted RBP10.4□□□□□ -0.74
SDHC-208ENST00000513009 GNRH1P01148 92 aa10.4□□□□□ -0.74
SDHC-208ENST00000513009 TNNI2P48788 182 aa10.4□□□□□ -0.74
SDHC-208ENST00000513009 PRMT2P55345 433 aa10.4□□□□□ -0.74
SDHC-208ENST00000513009 UBE4AQ14139 1066 aa10.4□□□□□ -0.74
SDHC-208ENST00000513009 SLC4A8Q2Y0W8 1093 aa10.4□□□□□ -0.74
SDHC-208ENST00000513009 DZIP1LQ8IYY4 767 aaKnown RBP10.4□□□□□ -0.74
SDHC-208ENST00000513009 FAM43AQ8N2R8 423 aa10.4□□□□□ -0.74
SDHC-208ENST00000513009 HDAC5Q9UQL6 1122 aa10.4□□□□□ -0.74
SDHC-208ENST00000513009 JAG2Q9Y219 1238 aa10.4□□□□□ -0.74
SDHC-208ENST00000513009 CSADQ9Y600 493 aa10.4□□□□□ -0.74
SDHC-208ENST00000513009 PTPRCP08575 1304 aa10.39□□□□□ -0.75
SDHC-208ENST00000513009 H0YGN5 161 aa10.39□□□□□ -0.75
SDHC-208ENST00000513009 HDLBPQ00341 1268 aaKnown RBP10.39□□□□□ -0.75
SDHC-208ENST00000513009 ALDH1L2Q3SY69 923 aa10.39□□□□□ -0.75
SDHC-208ENST00000513009 LMBR1LQ6UX01 489 aa10.39□□□□□ -0.75
SDHC-208ENST00000513009 LDHAL6AQ6ZMR3 332 aa10.39□□□□□ -0.75
SDHC-208ENST00000513009 SRCIN1Q9C0H9 1055 aa10.39□□□□□ -0.75
SDHC-208ENST00000513009 TMEM39BQ9GZU3 492 aa10.39□□□□□ -0.75
SDHC-208ENST00000513009 SMC4Q9NTJ3 1288 aa10.39□□□□□ -0.75
SDHC-208ENST00000513009 CHMP3Q9Y3E7 222 aa10.39□□□□□ -0.75
SDHC-208ENST00000513009 MKI67P46013 3256 aaKnown RBP10.39□□□□□ -0.75
SDHC-208ENST00000513009 ZNF521Q96K83 1311 aa10.38□□□□□ -0.75
SDHC-208ENST00000513009 TCP10L2B9ZVM9 353 aa10.38□□□□□ -0.75
SDHC-208ENST00000513009 IPO8O15397 1037 aaKnown RBP10.38□□□□□ -0.75
SDHC-208ENST00000513009 CETPP11597 493 aa10.38□□□□□ -0.75
SDHC-208ENST00000513009 HIBADHP31937 336 aaKnown RBP10.38□□□□□ -0.75
SDHC-208ENST00000513009 CRKP46108 304 aa10.38□□□□□ -0.75
SDHC-208ENST00000513009 LACTBP83111 547 aaPredicted RBP10.38□□□□□ -0.75
SDHC-208ENST00000513009 KIF22Q14807 665 aa10.38□□□□□ -0.75
SDHC-208ENST00000513009 CCDC57Q2TAC2 916 aa10.38□□□□□ -0.75
SDHC-208ENST00000513009 SWT1Q5T5J6 900 aaKnown RBP10.38□□□□□ -0.75
SDHC-208ENST00000513009 BEND3Q5T5X7 828 aa10.38□□□□□ -0.75
SDHC-208ENST00000513009 ERO1BQ86YB8 467 aa10.38□□□□□ -0.75
SDHC-208ENST00000513009 ZNF594Q96JF6 807 aaPredicted RBP10.38□□□□□ -0.75
SDHC-208ENST00000513009 FAM84BQ96KN1 310 aaPredicted RBP10.38□□□□□ -0.75
SDHC-208ENST00000513009 CNNM1Q9NRU3 951 aa10.38□□□□□ -0.75
SDHC-208ENST00000513009 ADGRG1Q9Y653 693 aa10.38□□□□□ -0.75
SDHC-208ENST00000513009 SNCAIPQ9Y6H5 919 aa10.38□□□□□ -0.75
SDHC-208ENST00000513009 TRIOBPQ9H2D6 2365 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms