RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 ZNF252P-AS1Q0IIN9 211 aa4.48□□□□□ -1.69
PDGFC-208ENST00000512711 BNIP3Q12983 259 aa4.48□□□□□ -1.69
PDGFC-208ENST00000512711 ZC3H12AQ5D1E8 599 aaKnown RBP4.48□□□□□ -1.69
PDGFC-208ENST00000512711 HP1BP3Q5SSJ5 553 aaPredicted RBP4.48□□□□□ -1.69
PDGFC-208ENST00000512711 TPTE2Q6XPS3 522 aa4.48□□□□□ -1.69
PDGFC-208ENST00000512711 SPRED2Q7Z698 418 aa4.48□□□□□ -1.69
PDGFC-208ENST00000512711 SMYD4Q8IYR2 804 aaPredicted RBP4.48□□□□□ -1.69
PDGFC-208ENST00000512711 GPBAR1Q8TDU6 330 aa4.48□□□□□ -1.69
PDGFC-208ENST00000512711 ASB16Q96NS5 453 aa4.48□□□□□ -1.69
PDGFC-208ENST00000512711 METTL22Q9BUU2 404 aaPredicted RBP4.48□□□□□ -1.69
PDGFC-208ENST00000512711 KRT82Q9NSB4 513 aa4.48□□□□□ -1.69
PDGFC-208ENST00000512711 CACNA2D2Q9NY47 1150 aa4.48□□□□□ -1.69
PDGFC-208ENST00000512711 PRNPP04156 253 aa4.47□□□□□ -1.69
PDGFC-208ENST00000512711 FAM87AP0C7U9 286 aa4.47□□□□□ -1.69
PDGFC-208ENST00000512711 XRCC5P13010 732 aaKnown RBP4.47□□□□□ -1.69
PDGFC-208ENST00000512711 NME2P22392 152 aa4.47□□□□□ -1.69
PDGFC-208ENST00000512711 PTPN11Q06124 597 aaPredicted RBP4.47□□□□□ -1.69
PDGFC-208ENST00000512711 UBE3DQ7Z6J8 389 aa4.47□□□□□ -1.69
PDGFC-208ENST00000512711 WFDC3Q8IUB2 231 aa4.47□□□□□ -1.69
PDGFC-208ENST00000512711 FAM181AQ8N9Y4 354 aa4.47□□□□□ -1.69
PDGFC-208ENST00000512711 ISL2Q96A47 359 aa4.47□□□□□ -1.69
PDGFC-208ENST00000512711 CBX8Q9HC52 389 aa4.47□□□□□ -1.69
PDGFC-208ENST00000512711 DCDC2CA8MYV0 355 aa4.46□□□□□ -1.7
PDGFC-208ENST00000512711 P4HBP07237 508 aaKnown RBP4.46□□□□□ -1.7
PDGFC-208ENST00000512711 CD96P40200 585 aa4.46□□□□□ -1.7
PDGFC-208ENST00000512711 PPM1JQ5JR12 505 aa4.46□□□□□ -1.7
PDGFC-208ENST00000512711 ZNF574Q6ZN55 896 aaPredicted RBP4.46□□□□□ -1.7
PDGFC-208ENST00000512711 C12orf40Q86WS4 652 aa4.46□□□□□ -1.7
PDGFC-208ENST00000512711 PLD6Q8N2A8 252 aaKnown RBP4.46□□□□□ -1.7
PDGFC-208ENST00000512711 ATXN3LQ9H3M9 355 aa4.46□□□□□ -1.7
PDGFC-208ENST00000512711 PIDD1Q9HB75 910 aa4.46□□□□□ -1.7
PDGFC-208ENST00000512711 PAK6Q9NQU5 681 aaPredicted RBP4.46□□□□□ -1.7
PDGFC-208ENST00000512711 BSDC1Q9NW68 430 aaPredicted RBP4.46□□□□□ -1.7
PDGFC-208ENST00000512711 GSTT1P30711 240 aa4.45□□□□□ -1.7
PDGFC-208ENST00000512711 NTF4P34130 210 aa4.45□□□□□ -1.7
PDGFC-208ENST00000512711 CYP27A1Q02318 531 aa4.45□□□□□ -1.7
PDGFC-208ENST00000512711 INPP5AQ14642 412 aa4.45□□□□□ -1.7
PDGFC-208ENST00000512711 CPSF6Q16630 551 aaKnown RBP eCLIP4.45□□□□□ -1.7
PDGFC-208ENST00000512711 CBLL1Q75N03 491 aa4.45□□□□□ -1.7
PDGFC-208ENST00000512711 FAM214BQ7L5A3 538 aa4.45□□□□□ -1.7
PDGFC-208ENST00000512711 ZSCAN29Q8IWY8 852 aaPredicted RBP4.45□□□□□ -1.7
PDGFC-208ENST00000512711 TP53INP2Q8IXH6 220 aa4.45□□□□□ -1.7
PDGFC-208ENST00000512711 BCL7CQ8WUZ0 217 aaPredicted RBP4.45□□□□□ -1.7
PDGFC-208ENST00000512711 HEXIM2Q96MH2 286 aaKnown RBP4.45□□□□□ -1.7
PDGFC-208ENST00000512711 DUSP23Q9BVJ7 150 aa4.45□□□□□ -1.7
PDGFC-208ENST00000512711 KRTAP4-9Q9BYQ8 210 aa4.45□□□□□ -1.7
PDGFC-208ENST00000512711 PCOLCE2Q9UKZ9 415 aa4.45□□□□□ -1.7
PDGFC-208ENST00000512711 ANGEL1Q9UNK9 670 aaKnown RBP4.45□□□□□ -1.7
PDGFC-208ENST00000512711 CELA3AP09093 270 aa4.44□□□□□ -1.7
PDGFC-208ENST00000512711 CDK8P49336 464 aa4.44□□□□□ -1.7
PDGFC-208ENST00000512711 ERVK-24P63145 666 aa4.44□□□□□ -1.7
PDGFC-208ENST00000512711 RING1Q06587 406 aa4.44□□□□□ -1.7
PDGFC-208ENST00000512711 KCNA1Q09470 495 aa4.44□□□□□ -1.7
PDGFC-208ENST00000512711 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.44□□□□□ -1.7
PDGFC-208ENST00000512711 RNF214Q8ND24 703 aa4.44□□□□□ -1.7
PDGFC-208ENST00000512711 ACSBG1Q96GR2 724 aa4.44□□□□□ -1.7
PDGFC-208ENST00000512711 TRAIPQ9BWF2 469 aa4.44□□□□□ -1.7
PDGFC-208ENST00000512711 SSU72Q9NP77 194 aaKnown RBP4.44□□□□□ -1.7
PDGFC-208ENST00000512711 PLAGL2Q9UPG8 496 aa4.44□□□□□ -1.7
PDGFC-208ENST00000512711 CNTNAP4Q9C0A0 1308 aa4.44□□□□□ -1.7
PDGFC-208ENST00000512711 LDHBP07195 334 aaKnown RBP4.43□□□□□ -1.7
PDGFC-208ENST00000512711 OXCT1P55809 520 aa4.43□□□□□ -1.7
PDGFC-208ENST00000512711 JAG1P78504 1218 aa4.43□□□□□ -1.7
PDGFC-208ENST00000512711 CYP27C1Q4G0S4 372 aa4.43□□□□□ -1.7
PDGFC-208ENST00000512711 ALG1LQ6GMV1 187 aa4.43□□□□□ -1.7
PDGFC-208ENST00000512711 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.43□□□□□ -1.7
PDGFC-208ENST00000512711 VSIG10LQ86VR7 867 aa4.43□□□□□ -1.7
PDGFC-208ENST00000512711 FLCNQ8NFG4 579 aa4.43□□□□□ -1.7
PDGFC-208ENST00000512711 FBF1Q8TES7 1133 aa4.43□□□□□ -1.7
PDGFC-208ENST00000512711 EMILIN2Q9BXX0 1053 aa4.43□□□□□ -1.7
PDGFC-208ENST00000512711 C12orf49Q9H741 205 aa4.43□□□□□ -1.7
PDGFC-208ENST00000512711 PCDHA4Q9UN74 947 aa4.43□□□□□ -1.7
PDGFC-208ENST00000512711 USP17L7P0C7H9 530 aa4.42□□□□□ -1.7
PDGFC-208ENST00000512711 CD8BP10966 210 aa4.42□□□□□ -1.7
PDGFC-208ENST00000512711 OGFOD2Q6N063 350 aa4.42□□□□□ -1.7
PDGFC-208ENST00000512711 TOP6BLQ8N6T0 577 aa4.42□□□□□ -1.7
PDGFC-208ENST00000512711 FBXL18Q96ME1 805 aa4.42□□□□□ -1.7
PDGFC-208ENST00000512711 CEP44Q9C0F1 390 aa4.42□□□□□ -1.7
PDGFC-208ENST00000512711 ANKRD33BA6NCL7 494 aa4.41□□□□□ -1.7
PDGFC-208ENST00000512711 GIPC1O14908 333 aa4.41□□□□□ -1.7
PDGFC-208ENST00000512711 TRIM37O94972 964 aa4.41□□□□□ -1.7
PDGFC-208ENST00000512711 PCNX4Q63HM2 1172 aa4.41□□□□□ -1.7
PDGFC-208ENST00000512711 LLGL2Q6P1M3 1020 aa4.41□□□□□ -1.7
PDGFC-208ENST00000512711 LRFN4Q6PJG9 635 aa4.41□□□□□ -1.7
PDGFC-208ENST00000512711 RIN3Q8TB24 985 aa4.41□□□□□ -1.7
PDGFC-208ENST00000512711 NETO1Q8TDF5 533 aa4.41□□□□□ -1.7
PDGFC-208ENST00000512711 SRCIN1Q9C0H9 1055 aa4.41□□□□□ -1.7
PDGFC-208ENST00000512711 FAM8A1Q9UBU6 413 aa4.41□□□□□ -1.7
PDGFC-208ENST00000512711 ADAMTS6Q9UKP5 1117 aa4.41□□□□□ -1.7
PDGFC-208ENST00000512711 SPG7Q9UQ90 795 aa4.41□□□□□ -1.7
PDGFC-208ENST00000512711 SLC5A6Q9Y289 635 aa4.41□□□□□ -1.7
PDGFC-208ENST00000512711 EOMESO95936 686 aa4.4□□□□□ -1.71
PDGFC-208ENST00000512711 ATP2B2Q01814 1243 aa4.4□□□□□ -1.71
PDGFC-208ENST00000512711 NKG7Q16617 165 aa4.4□□□□□ -1.71
PDGFC-208ENST00000512711 AOC3Q16853 763 aa4.4□□□□□ -1.71
PDGFC-208ENST00000512711 ZBTB37Q5TC79 503 aa4.4□□□□□ -1.71
PDGFC-208ENST00000512711 AEBP1Q8IUX7 1158 aa4.4□□□□□ -1.71
PDGFC-208ENST00000512711 ANKRD24Q8TF21 1146 aa4.4□□□□□ -1.71
PDGFC-208ENST00000512711 DUSP9Q99956 384 aaKnown RBP4.4□□□□□ -1.71
PDGFC-208ENST00000512711 FBRSQ9HAH7 460 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms