RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 NIFKQ9BYG3 293 aaKnown RBP7.64□□□□□ -1.19
CHD1-208ENST00000512392 SETD1BQ9UPS6 1966 aaKnown RBP7.63□□□□□ -1.19
CHD1-208ENST00000512392 CBFA2T2O43439 604 aa7.63□□□□□ -1.19
CHD1-208ENST00000512392 PDE8AO60658 829 aa7.63□□□□□ -1.19
CHD1-208ENST00000512392 IGHDP01880 384 aa7.63□□□□□ -1.19
CHD1-208ENST00000512392 HTR3AP46098 478 aa7.63□□□□□ -1.19
CHD1-208ENST00000512392 CBX2Q14781 532 aaPredicted RBP7.63□□□□□ -1.19
CHD1-208ENST00000512392 CDC37Q16543 378 aaPredicted RBP7.63□□□□□ -1.19
CHD1-208ENST00000512392 CCDC92Q53HC0 331 aaPredicted RBP7.63□□□□□ -1.19
CHD1-208ENST00000512392 HYIQ5T013 277 aa7.63□□□□□ -1.19
CHD1-208ENST00000512392 C1orf53Q5VUE5 145 aa7.63□□□□□ -1.19
CHD1-208ENST00000512392 USPL1Q5W0Q7 1092 aa7.63□□□□□ -1.19
CHD1-208ENST00000512392 NXNQ6DKJ4 435 aa7.63□□□□□ -1.19
CHD1-208ENST00000512392 ALKBH2Q6NS38 261 aa7.63□□□□□ -1.19
CHD1-208ENST00000512392 STRA8Q7Z7C7 330 aa7.63□□□□□ -1.19
CHD1-208ENST00000512392 SLC9A9Q8IVB4 645 aa7.63□□□□□ -1.19
CHD1-208ENST00000512392 KIAA1958Q8N8K9 716 aa7.63□□□□□ -1.19
CHD1-208ENST00000512392 ENAHQ8N8S7 591 aaPredicted RBP7.63□□□□□ -1.19
CHD1-208ENST00000512392 CPLX3Q8WVH0 158 aa7.63□□□□□ -1.19
CHD1-208ENST00000512392 SERINC2Q96SA4 455 aa7.63□□□□□ -1.19
CHD1-208ENST00000512392 KLRG2A4D1S0 409 aaPredicted RBP7.62□□□□□ -1.19
CHD1-208ENST00000512392 RASSF10A6NK89 507 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 FIBPO43427 364 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 TNFRSF21O75509 655 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 TRIM37O94972 964 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 ANKRD23Q86SG2 305 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 RELL1Q8IUW5 271 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 NIM1KQ8IY84 436 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 ZNF295-AS1Q8N0V1 137 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 FBXO41Q8TF61 875 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 SCG3Q8WXD2 468 aaKnown RBP7.62□□□□□ -1.19
CHD1-208ENST00000512392 SHDQ96IW2 340 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 C2orf49Q9BVC5 232 aaPredicted RBP7.62□□□□□ -1.19
CHD1-208ENST00000512392 OBP2AQ9NY56 170 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 KDM2BQ8NHM5 1336 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 IGF1RP08069 1367 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 A6NCN8 305 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 MINDY4BA8MYZ0 360 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 RHOBTB3O94955 611 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 IGFBP4P22692 258 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 TCIRG1Q13488 830 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 SETDB1Q15047 1291 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 C4orf17Q53FE4 359 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 CFAP161Q6P656 301 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 CCDC81Q6ZN84 652 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 LHFPL2Q6ZUX7 228 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 AFAP1L2Q8N4X5 818 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 PJA1Q8NG27 643 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 NELL1Q92832 810 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 MFSD3Q96ES6 412 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 TSPAN10Q9H1Z9 355 aaPredicted RBP7.62□□□□□ -1.19
CHD1-208ENST00000512392 AASDHPPTQ9NRN7 309 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 SAGE1Q9NXZ1 904 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 ZNF180Q9UJW8 692 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 FBXO2Q9UK22 296 aaPredicted RBP7.62□□□□□ -1.19
CHD1-208ENST00000512392 USP3Q9Y6I4 520 aa7.62□□□□□ -1.19
CHD1-208ENST00000512392 ATAD2Q6PL18 1390 aa7.61□□□□□ -1.19
CHD1-208ENST00000512392 FOXO3O43524 673 aa7.61□□□□□ -1.19
CHD1-208ENST00000512392 NBPF7P0C2Y1 421 aaPredicted RBP7.61□□□□□ -1.19
CHD1-208ENST00000512392 RHOQP17081 205 aa7.61□□□□□ -1.19
CHD1-208ENST00000512392 TNFAIP3P21580 790 aa7.61□□□□□ -1.19
CHD1-208ENST00000512392 IRS1P35568 1242 aa7.61□□□□□ -1.19
CHD1-208ENST00000512392 PURAQ00577 322 aaKnown RBP7.61□□□□□ -1.19
CHD1-208ENST00000512392 NEXNQ0ZGT2 675 aa7.61□□□□□ -1.19
CHD1-208ENST00000512392 TEAD4Q15561 434 aa7.61□□□□□ -1.19
CHD1-208ENST00000512392 GFOD2Q3B7J2 385 aa7.61□□□□□ -1.19
CHD1-208ENST00000512392 MTERF2Q49AM1 385 aa7.61□□□□□ -1.19
CHD1-208ENST00000512392 AKAP4Q5JQC9 854 aa7.61□□□□□ -1.19
CHD1-208ENST00000512392 NINJ1Q92982 152 aa7.61□□□□□ -1.19
CHD1-208ENST00000512392 STRBPQ96SI9 672 aaKnown RBP7.61□□□□□ -1.19
CHD1-208ENST00000512392 YIPF4Q9BSR8 244 aa7.61□□□□□ -1.19
CHD1-208ENST00000512392 STRIP2Q9ULQ0 834 aa7.61□□□□□ -1.19
CHD1-208ENST00000512392 MAPK8IP1Q9UQF2 711 aa7.61□□□□□ -1.19
CHD1-208ENST00000512392 HCN4Q9Y3Q4 1203 aa7.61□□□□□ -1.19
CHD1-208ENST00000512392 APAF1O14727 1248 aa7.6□□□□□ -1.19
CHD1-208ENST00000512392 AGR2O95994 175 aa7.6□□□□□ -1.19
CHD1-208ENST00000512392 PSMA6P60900 246 aaKnown RBP7.6□□□□□ -1.19
CHD1-208ENST00000512392 PTSQ03393 145 aa7.6□□□□□ -1.19
CHD1-208ENST00000512392 PICALMQ13492 652 aa7.6□□□□□ -1.19
CHD1-208ENST00000512392 PPP4R3AQ6IN85 833 aa7.6□□□□□ -1.19
CHD1-208ENST00000512392 STAG2Q8N3U4 1231 aa7.6□□□□□ -1.19
CHD1-208ENST00000512392 CHMP7Q8WUX9 453 aaPredicted RBP7.6□□□□□ -1.19
CHD1-208ENST00000512392 MYCBPQ99417 103 aaPredicted RBP7.6□□□□□ -1.19
CHD1-208ENST00000512392 NELL2Q99435 816 aa7.6□□□□□ -1.19
CHD1-208ENST00000512392 SARGQ9BW04 601 aa7.6□□□□□ -1.19
CHD1-208ENST00000512392 SEZ6LQ9BYH1 1024 aa7.6□□□□□ -1.19
CHD1-208ENST00000512392 CABP1Q9NZU7 370 aa7.6□□□□□ -1.19
CHD1-208ENST00000512392 MORC2Q9Y6X9 1032 aaPredicted RBP7.6□□□□□ -1.19
CHD1-208ENST00000512392 A0A1W2PRQ8 180 aa7.6□□□□□ -1.19
CHD1-208ENST00000512392 MTA2O94776 668 aa7.6□□□□□ -1.19
CHD1-208ENST00000512392 EYA4O95677 639 aa7.6□□□□□ -1.19
CHD1-208ENST00000512392 ZNF354CQ86Y25 554 aa7.6□□□□□ -1.19
CHD1-208ENST00000512392 EPS8L3Q8TE67 593 aaKnown RBP7.6□□□□□ -1.19
CHD1-208ENST00000512392 HERPUD2Q9BSE4 406 aa7.6□□□□□ -1.19
CHD1-208ENST00000512392 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.6□□□□□ -1.19
CHD1-208ENST00000512392 CNNM2Q9H8M5 875 aa7.6□□□□□ -1.19
CHD1-208ENST00000512392 TIMMDC1Q9NPL8 285 aa7.6□□□□□ -1.19
CHD1-208ENST00000512392 KMT5AQ9NQR1 393 aa7.6□□□□□ -1.19
CHD1-208ENST00000512392 GTF2IRD1Q9UHL9 959 aa7.6□□□□□ -1.19
CHD1-208ENST00000512392 LRFN2Q9ULH4 789 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms