RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 CDHR2Q9BYE9 1310 aa11.82□□□□□ -0.52
SNF8-211ENST00000512243 SPEF2Q9C093 1822 aa11.81□□□□□ -0.52
SNF8-211ENST00000512243 MCM6Q14566 821 aa11.81□□□□□ -0.52
SNF8-211ENST00000512243 MVPQ14764 893 aaKnown RBP11.81□□□□□ -0.52
SNF8-211ENST00000512243 C20orf194Q5TEA3 1177 aa11.81□□□□□ -0.52
SNF8-211ENST00000512243 FAM89AQ96GI7 184 aa11.81□□□□□ -0.52
SNF8-211ENST00000512243 BRCA1P38398 1863 aaKnown RBP11.8□□□□□ -0.52
SNF8-211ENST00000512243 H7C1W4 665 aa11.8□□□□□ -0.52
SNF8-211ENST00000512243 IRS4O14654 1257 aaPredicted RBP11.8□□□□□ -0.52
SNF8-211ENST00000512243 GNAI3P08754 354 aa11.8□□□□□ -0.52
SNF8-211ENST00000512243 UBTFL1P0CB47 393 aaPredicted RBP11.8□□□□□ -0.52
SNF8-211ENST00000512243 VSIG8P0DPA2 414 aa11.8□□□□□ -0.52
SNF8-211ENST00000512243 VAC14Q08AM6 782 aa11.8□□□□□ -0.52
SNF8-211ENST00000512243 CCDC155Q8N6L0 562 aa11.8□□□□□ -0.52
SNF8-211ENST00000512243 JARID2Q92833 1246 aaPredicted RBP11.8□□□□□ -0.52
SNF8-211ENST00000512243 CEP126Q9P2H0 1117 aa11.8□□□□□ -0.52
SNF8-211ENST00000512243 DDX19BQ9UMR2 479 aa11.8□□□□□ -0.52
SNF8-211ENST00000512243 COG6Q9Y2V7 657 aa11.8□□□□□ -0.52
SNF8-211ENST00000512243 UTYO14607 1347 aa11.8□□□□□ -0.52
SNF8-211ENST00000512243 MEN1O00255 615 aa11.79□□□□□ -0.52
SNF8-211ENST00000512243 HCLS1P14317 486 aaPredicted RBP11.79□□□□□ -0.52
SNF8-211ENST00000512243 CASP7P55210 303 aa11.79□□□□□ -0.52
SNF8-211ENST00000512243 SYNE4Q8N205 404 aa11.79□□□□□ -0.52
SNF8-211ENST00000512243 MEIS3Q99687 375 aa11.79□□□□□ -0.52
SNF8-211ENST00000512243 CHMP4BQ9H444 224 aaKnown RBP11.79□□□□□ -0.52
SNF8-211ENST00000512243 HDAC5Q9UQL6 1122 aa11.79□□□□□ -0.52
SNF8-211ENST00000512243 TAF1P21675 1872 aa11.78□□□□□ -0.52
SNF8-211ENST00000512243 PDE8AO60658 829 aa11.78□□□□□ -0.52
SNF8-211ENST00000512243 PDE6BP35913 854 aa11.78□□□□□ -0.52
SNF8-211ENST00000512243 SUCLG2Q96I99 432 aa11.78□□□□□ -0.52
SNF8-211ENST00000512243 NLRP3Q96P20 1036 aa11.78□□□□□ -0.52
SNF8-211ENST00000512243 CCDC85AQ96PX6 553 aaPredicted RBP11.78□□□□□ -0.52
SNF8-211ENST00000512243 BRIP1Q9BX63 1249 aa11.78□□□□□ -0.52
SNF8-211ENST00000512243 PLA2G12BQ9BX93 195 aa11.78□□□□□ -0.52
SNF8-211ENST00000512243 USP44Q9H0E7 712 aa11.78□□□□□ -0.52
SNF8-211ENST00000512243 SLC35F4A4IF30 521 aa11.77□□□□□ -0.53
SNF8-211ENST00000512243 NBPF7P0C2Y1 421 aaPredicted RBP11.77□□□□□ -0.53
SNF8-211ENST00000512243 CTSWP56202 376 aa11.77□□□□□ -0.53
SNF8-211ENST00000512243 SLC10A5Q5PT55 438 aa11.77□□□□□ -0.53
SNF8-211ENST00000512243 CRBNQ96SW2 442 aa11.77□□□□□ -0.53
SNF8-211ENST00000512243 CD2APQ9Y5K6 639 aa11.77□□□□□ -0.53
SNF8-211ENST00000512243 SRCAPQ6ZRS2 3230 aa11.77□□□□□ -0.53
SNF8-211ENST00000512243 A0A1W2PRU2 124 aa11.76□□□□□ -0.53
SNF8-211ENST00000512243 GNAI2P04899 355 aa11.76□□□□□ -0.53
SNF8-211ENST00000512243 CCDC152Q4G0S7 254 aa11.76□□□□□ -0.53
SNF8-211ENST00000512243 PRICKLE2Q7Z3G6 844 aa11.76□□□□□ -0.53
SNF8-211ENST00000512243 C2CD5Q86YS7 1000 aa11.76□□□□□ -0.53
SNF8-211ENST00000512243 RPGRQ92834 1020 aaKnown RBP11.76□□□□□ -0.53
SNF8-211ENST00000512243 OSBPL3Q9H4L5 887 aa11.76□□□□□ -0.53
SNF8-211ENST00000512243 LRRFIP2Q9Y608 721 aaKnown RBP11.76□□□□□ -0.53
SNF8-211ENST00000512243 ARFGEF1Q9Y6D6 1849 aa11.76□□□□□ -0.53
SNF8-211ENST00000512243 H0YIN7 160 aa11.75□□□□□ -0.53
SNF8-211ENST00000512243 ZBTB7BO15156 539 aaPredicted RBP11.75□□□□□ -0.53
SNF8-211ENST00000512243 NEFLP07196 543 aa11.75□□□□□ -0.53
SNF8-211ENST00000512243 RHOQP17081 205 aa11.75□□□□□ -0.53
SNF8-211ENST00000512243 TGFB2P61812 414 aa11.75□□□□□ -0.53
SNF8-211ENST00000512243 LYSMD3Q7Z3D4 306 aa11.75□□□□□ -0.53
SNF8-211ENST00000512243 CYP2U1Q7Z449 544 aa11.75□□□□□ -0.53
SNF8-211ENST00000512243 BICC1Q9H694 974 aaKnown RBP11.75□□□□□ -0.53
SNF8-211ENST00000512243 ARHGEF10LQ9HCE6 1279 aa11.75□□□□□ -0.53
SNF8-211ENST00000512243 CHMP3Q9Y3E7 222 aa11.75□□□□□ -0.53
SNF8-211ENST00000512243 KLRG2A4D1S0 409 aaPredicted RBP11.74□□□□□ -0.53
SNF8-211ENST00000512243 NPR1P16066 1061 aa11.74□□□□□ -0.53
SNF8-211ENST00000512243 IRX6P78412 446 aaPredicted RBP11.74□□□□□ -0.53
SNF8-211ENST00000512243 SF3B3Q15393 1217 aaKnown RBP11.74□□□□□ -0.53
SNF8-211ENST00000512243 CRY2Q49AN0 593 aa11.74□□□□□ -0.53
SNF8-211ENST00000512243 DDX46Q7L014 1031 aaKnown RBP11.74□□□□□ -0.53
SNF8-211ENST00000512243 MASTLQ96GX5 879 aa11.74□□□□□ -0.53
SNF8-211ENST00000512243 RBM17Q96I25 401 aaKnown RBP11.74□□□□□ -0.53
SNF8-211ENST00000512243 FHDC1Q9C0D6 1143 aaPredicted RBP11.74□□□□□ -0.53
SNF8-211ENST00000512243 C1orf115Q9H7X2 142 aa11.74□□□□□ -0.53
SNF8-211ENST00000512243 STK17AQ9UEE5 414 aa11.74□□□□□ -0.53
SNF8-211ENST00000512243 RTL9Q8NET4 1388 aa11.74□□□□□ -0.53
SNF8-211ENST00000512243 A0A1B0GUL6 1792 aa11.74□□□□□ -0.53
SNF8-211ENST00000512243 SLX4Q8IY92 1834 aa11.74□□□□□ -0.53
SNF8-211ENST00000512243 LRRC37AA6NMS7 1700 aa11.73□□□□□ -0.53
SNF8-211ENST00000512243 SRGNP10124 158 aa11.73□□□□□ -0.53
SNF8-211ENST00000512243 DPEP1P16444 411 aa11.73□□□□□ -0.53
SNF8-211ENST00000512243 LORP23490 312 aaPredicted RBP11.73□□□□□ -0.53
SNF8-211ENST00000512243 CHRNA5P30532 468 aa11.73□□□□□ -0.53
SNF8-211ENST00000512243 FOXO4P98177 505 aa11.73□□□□□ -0.53
SNF8-211ENST00000512243 TSGA10IPQ3SY00 556 aa11.73□□□□□ -0.53
SNF8-211ENST00000512243 EPHA10Q5JZY3 1008 aa11.73□□□□□ -0.53
SNF8-211ENST00000512243 STYK1Q6J9G0 422 aa11.73□□□□□ -0.53
SNF8-211ENST00000512243 LMBR1LQ6UX01 489 aa11.73□□□□□ -0.53
SNF8-211ENST00000512243 GPR161Q8N6U8 529 aaKnown RBP11.73□□□□□ -0.53
SNF8-211ENST00000512243 ANKRD44Q8N8A2 993 aa11.73□□□□□ -0.53
SNF8-211ENST00000512243 TTLL11Q8NHH1 800 aa11.73□□□□□ -0.53
SNF8-211ENST00000512243 ZNF622Q969S3 477 aaKnown RBP eCLIP11.73□□□□□ -0.53
SNF8-211ENST00000512243 KAZALD1Q96I82 304 aa11.73□□□□□ -0.53
SNF8-211ENST00000512243 RAB6BQ9NRW1 208 aa11.73□□□□□ -0.53
SNF8-211ENST00000512243 CDC14CA4D256 554 aa11.72□□□□□ -0.53
SNF8-211ENST00000512243 TRAK2O60296 914 aa11.72□□□□□ -0.53
SNF8-211ENST00000512243 CSF1RP07333 972 aa11.72□□□□□ -0.53
SNF8-211ENST00000512243 ITGA6P23229 1130 aa11.72□□□□□ -0.53
SNF8-211ENST00000512243 RNF144AP50876 292 aaPredicted RBP11.72□□□□□ -0.53
SNF8-211ENST00000512243 RABL6Q3YEC7 729 aaPredicted RBP11.72□□□□□ -0.53
SNF8-211ENST00000512243 TAF7LQ5H9L4 462 aa11.72□□□□□ -0.53
SNF8-211ENST00000512243 ZSCAN1Q8NBB4 408 aa11.72□□□□□ -0.53
SNF8-211ENST00000512243 NLGN2Q8NFZ4 835 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms