RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 RUFY1Q96T51 708 aa14.93□□□□□ -0.02
PCDHA4-202ENST00000512229 EXOC1Q9NV70 894 aa14.93□□□□□ -0.02
PCDHA4-202ENST00000512229 PDE6BP35913 854 aa14.93□□□□□ -0.02
PCDHA4-202ENST00000512229 TEX35Q5T0J7 233 aa14.93□□□□□ -0.02
PCDHA4-202ENST00000512229 SYNE4Q8N205 404 aa14.93□□□□□ -0.02
PCDHA4-202ENST00000512229 CEP170BQ9Y4F5 1589 aaPredicted RBP14.93□□□□□ -0.02
PCDHA4-202ENST00000512229 ELP1O95163 1332 aa14.93□□□□□ -0.02
PCDHA4-202ENST00000512229 TNNT1P13805 278 aa14.93□□□□□ -0.02
PCDHA4-202ENST00000512229 ADD2P35612 726 aa14.93□□□□□ -0.02
PCDHA4-202ENST00000512229 TRMT1LQ7Z2T5 733 aaKnown RBP14.93□□□□□ -0.02
PCDHA4-202ENST00000512229 ZNF830Q96NB3 372 aaPredicted RBP14.93□□□□□ -0.02
PCDHA4-202ENST00000512229 CD163L1Q9NR16 1453 aa14.93□□□□□ -0.02
PCDHA4-202ENST00000512229 VWA3AA6NCI4 1184 aa14.92□□□□□ -0.02
PCDHA4-202ENST00000512229 PDIA3P30101 505 aaKnown RBP14.92□□□□□ -0.02
PCDHA4-202ENST00000512229 FAM47AQ5JRC9 791 aa14.92□□□□□ -0.02
PCDHA4-202ENST00000512229 LUZP1Q86V48 1076 aa14.92□□□□□ -0.02
PCDHA4-202ENST00000512229 SEPT12Q8IYM1 358 aa14.92□□□□□ -0.02
PCDHA4-202ENST00000512229 SMARCC2Q8TAQ2 1214 aa14.92□□□□□ -0.02
PCDHA4-202ENST00000512229 TMEM63CQ9P1W3 806 aa14.92□□□□□ -0.02
PCDHA4-202ENST00000512229 CEMIPQ8WUJ3 1361 aa14.92□□□□□ -0.02
PCDHA4-202ENST00000512229 SPDYE3A6NKU9 549 aa14.92□□□□□ -0.02
PCDHA4-202ENST00000512229 SPAG1Q07617 926 aa14.92□□□□□ -0.02
PCDHA4-202ENST00000512229 SPA17Q15506 151 aa14.92□□□□□ -0.02
PCDHA4-202ENST00000512229 KRT79Q5XKE5 535 aa14.92□□□□□ -0.02
PCDHA4-202ENST00000512229 LEMD3Q9Y2U8 911 aa14.92□□□□□ -0.02
PCDHA4-202ENST00000512229 USP32Q8NFA0 1604 aa14.92□□□□□ -0.02
PCDHA4-202ENST00000512229 PSMA7O14818 248 aa14.92□□□□□ -0.02
PCDHA4-202ENST00000512229 YEATS4O95619 227 aa14.92□□□□□ -0.02
PCDHA4-202ENST00000512229 MRPL12P52815 198 aaKnown RBP14.92□□□□□ -0.02
PCDHA4-202ENST00000512229 EIF6P56537 245 aaKnown RBP14.92□□□□□ -0.02
PCDHA4-202ENST00000512229 SEMA3EO15041 775 aa14.92□□□□□ -0.02
PCDHA4-202ENST00000512229 RPS6KA4O75676 772 aa14.92□□□□□ -0.02
PCDHA4-202ENST00000512229 TTC12Q9H892 705 aaPredicted RBP14.92□□□□□ -0.02
PCDHA4-202ENST00000512229 SRP68Q9UHB9 627 aaKnown RBP14.92□□□□□ -0.02
PCDHA4-202ENST00000512229 SAMM50Q9Y512 469 aa14.92□□□□□ -0.02
PCDHA4-202ENST00000512229 SERPINB2P05120 415 aa14.91□□□□□ -0.02
PCDHA4-202ENST00000512229 ASIC1P78348 528 aa14.91□□□□□ -0.02
PCDHA4-202ENST00000512229 CCDC40Q4G0X9 1142 aa14.91□□□□□ -0.02
PCDHA4-202ENST00000512229 MYSM1Q5VVJ2 828 aa14.91□□□□□ -0.02
PCDHA4-202ENST00000512229 FAM114A1Q8IWE2 563 aa14.91□□□□□ -0.02
PCDHA4-202ENST00000512229 FANCBQ8NB91 859 aa14.91□□□□□ -0.02
PCDHA4-202ENST00000512229 UBXN4Q92575 508 aa14.91□□□□□ -0.02
PCDHA4-202ENST00000512229 ERCC4Q92889 916 aaPredicted RBP14.91□□□□□ -0.02
PCDHA4-202ENST00000512229 KCNH3Q9ULD8 1083 aa14.91□□□□□ -0.02
PCDHA4-202ENST00000512229 KCNJ14Q9UNX9 436 aa14.91□□□□□ -0.02
PCDHA4-202ENST00000512229 TTF2Q9UNY4 1162 aaKnown RBP14.91□□□□□ -0.02
PCDHA4-202ENST00000512229 CCDC181Q5TID7 509 aa14.91□□□□□ -0.02
PCDHA4-202ENST00000512229 KRT27Q7Z3Y8 459 aa14.91□□□□□ -0.02
PCDHA4-202ENST00000512229 CCDC150Q8NCX0 1101 aa14.91□□□□□ -0.02
PCDHA4-202ENST00000512229 PUS7LQ9H0K6 701 aaKnown RBP14.91□□□□□ -0.02
PCDHA4-202ENST00000512229 GPCPD1Q9NPB8 672 aa14.91□□□□□ -0.02
PCDHA4-202ENST00000512229 LETM2Q2VYF4 491 aa14.91□□□□□ -0.02
PCDHA4-202ENST00000512229 WWC2Q6AWC2 1192 aa14.91□□□□□ -0.02
PCDHA4-202ENST00000512229 LARGE2Q8N3Y3 721 aa14.91□□□□□ -0.02
PCDHA4-202ENST00000512229 ZKSCAN5Q9Y2L8 839 aa14.91□□□□□ -0.02
PCDHA4-202ENST00000512229 TNKSO95271 1327 aa14.9□□□□□ -0.02
PCDHA4-202ENST00000512229 hCG_1642624A0A1W2PR95 340 aa14.9□□□□□ -0.02
PCDHA4-202ENST00000512229 PIK3AP1Q6ZUJ8 805 aa14.9□□□□□ -0.02
PCDHA4-202ENST00000512229 CLSTN2Q9H4D0 955 aa14.9□□□□□ -0.02
PCDHA4-202ENST00000512229 ATP10DQ9P241 1426 aa14.9□□□□□ -0.02
PCDHA4-202ENST00000512229 KIF5CO60282 957 aa14.9□□□□□ -0.02
PCDHA4-202ENST00000512229 URI1O94763 535 aaPredicted RBP14.9□□□□□ -0.02
PCDHA4-202ENST00000512229 SCRN1Q12765 414 aa14.9□□□□□ -0.02
PCDHA4-202ENST00000512229 MSL1Q68DK7 614 aa14.9□□□□□ -0.02
PCDHA4-202ENST00000512229 TICAM2Q86XR7 235 aa14.9□□□□□ -0.02
PCDHA4-202ENST00000512229 XDHP47989 1333 aa14.9□□□□□ -0.02
PCDHA4-202ENST00000512229 M0R2C6 588 aa14.9□□□□□ -0.02
PCDHA4-202ENST00000512229 CUTAO60888 179 aa14.9□□□□□ -0.02
PCDHA4-202ENST00000512229 SKILP12757 684 aa14.9□□□□□ -0.02
PCDHA4-202ENST00000512229 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.9□□□□□ -0.02
PCDHA4-202ENST00000512229 CHAMP1Q96JM3 812 aa14.9□□□□□ -0.02
PCDHA4-202ENST00000512229 CTAGE1Q96RT6 745 aa14.9□□□□□ -0.02
PCDHA4-202ENST00000512229 ATP8A2Q9NTI2 1148 aa14.9□□□□□ -0.02
PCDHA4-202ENST00000512229 SEPT11Q9NVA2 429 aaKnown RBP14.9□□□□□ -0.02
PCDHA4-202ENST00000512229 BBOX1O75936 387 aa14.89□□□□□ -0.03
PCDHA4-202ENST00000512229 HS1BP3Q53T59 392 aa14.89□□□□□ -0.03
PCDHA4-202ENST00000512229 TCERG1LQ5VWI1 586 aa14.89□□□□□ -0.03
PCDHA4-202ENST00000512229 ZSCAN10Q96SZ4 725 aaPredicted RBP14.89□□□□□ -0.03
PCDHA4-202ENST00000512229 ZNF202O95125 648 aa14.89□□□□□ -0.03
PCDHA4-202ENST00000512229 RASGRF1Q13972 1273 aa14.89□□□□□ -0.03
PCDHA4-202ENST00000512229 RABL6Q3YEC7 729 aaPredicted RBP14.89□□□□□ -0.03
PCDHA4-202ENST00000512229 SUPT20HQ8NEM7 779 aa14.89□□□□□ -0.03
PCDHA4-202ENST00000512229 FBXO18Q8NFZ0 1043 aa14.89□□□□□ -0.03
PCDHA4-202ENST00000512229 TEKT1Q969V4 418 aa14.89□□□□□ -0.03
PCDHA4-202ENST00000512229 USP28Q96RU2 1077 aa14.89□□□□□ -0.03
PCDHA4-202ENST00000512229 VPS54Q9P1Q0 977 aa14.89□□□□□ -0.03
PCDHA4-202ENST00000512229 SOS2Q07890 1332 aaPredicted RBP14.89□□□□□ -0.03
PCDHA4-202ENST00000512229 KCNQ2O43526 872 aa14.88□□□□□ -0.03
PCDHA4-202ENST00000512229 BAG6P46379 1132 aa14.88□□□□□ -0.03
PCDHA4-202ENST00000512229 TCP10Q12799 353 aa14.88□□□□□ -0.03
PCDHA4-202ENST00000512229 KIF4BQ2VIQ3 1234 aa14.88□□□□□ -0.03
PCDHA4-202ENST00000512229 CDHR2Q9BYE9 1310 aa14.88□□□□□ -0.03
PCDHA4-202ENST00000512229 SNAP23O00161 211 aa14.88□□□□□ -0.03
PCDHA4-202ENST00000512229 MATR3P43243 847 aaKnown RBP eCLIP14.88□□□□□ -0.03
PCDHA4-202ENST00000512229 STXBP4Q6ZWJ1 553 aa14.88□□□□□ -0.03
PCDHA4-202ENST00000512229 USP40Q9NVE5 1235 aa14.88□□□□□ -0.03
PCDHA4-202ENST00000512229 TBCAO75347 108 aaKnown RBP14.88□□□□□ -0.03
PCDHA4-202ENST00000512229 PCP11498 1178 aaKnown RBP14.88□□□□□ -0.03
PCDHA4-202ENST00000512229 TTC38Q5R3I4 469 aa14.88□□□□□ -0.03
PCDHA4-202ENST00000512229 LZTS2Q9BRK4 669 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms