RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 CCDC88AQ3V6T2 1871 aa9.64□□□□□ -0.87
HTT-209ENST00000512068 MAST3O60307 1309 aa9.63□□□□□ -0.87
HTT-209ENST00000512068 CYP2E1P05181 493 aaPredicted RBP9.63□□□□□ -0.87
HTT-209ENST00000512068 ADD2P35612 726 aa9.63□□□□□ -0.87
HTT-209ENST00000512068 PTH1RQ03431 593 aa9.63□□□□□ -0.87
HTT-209ENST00000512068 UBE3CQ15386 1083 aa9.63□□□□□ -0.87
HTT-209ENST00000512068 SKIV2LQ15477 1246 aaKnown RBP9.63□□□□□ -0.87
HTT-209ENST00000512068 CREB3L3Q68CJ9 461 aa9.63□□□□□ -0.87
HTT-209ENST00000512068 SPTY2D1Q68D10 685 aaPredicted RBP9.63□□□□□ -0.87
HTT-209ENST00000512068 CCDC129Q6ZRS4 1044 aa9.63□□□□□ -0.87
HTT-209ENST00000512068 ZNF589Q86UQ0 364 aaPredicted RBP9.63□□□□□ -0.87
HTT-209ENST00000512068 C2CD5Q86YS7 1000 aa9.63□□□□□ -0.87
HTT-209ENST00000512068 MAGEB6Q8N7X4 407 aa9.63□□□□□ -0.87
HTT-209ENST00000512068 SLC16A10Q8TF71 515 aa9.63□□□□□ -0.87
HTT-209ENST00000512068 MAP4K1Q92918 833 aa9.63□□□□□ -0.87
HTT-209ENST00000512068 WNT2BQ93097 391 aa9.63□□□□□ -0.87
HTT-209ENST00000512068 DSCC1Q9BVC3 393 aa9.63□□□□□ -0.87
HTT-209ENST00000512068 ABCF2Q9UG63 623 aa9.63□□□□□ -0.87
HTT-209ENST00000512068 IQSEC3Q9UPP2 1182 aaPredicted RBP9.63□□□□□ -0.87
HTT-209ENST00000512068 EP400Q96L91 3159 aa9.63□□□□□ -0.87
HTT-209ENST00000512068 COL4A1P02462 1669 aa9.63□□□□□ -0.87
HTT-209ENST00000512068 MYO5AQ9Y4I1 1855 aaKnown RBP9.63□□□□□ -0.87
HTT-209ENST00000512068 ZNF532Q9HCE3 1301 aa9.62□□□□□ -0.87
HTT-209ENST00000512068 KLRG2A4D1S0 409 aaPredicted RBP9.62□□□□□ -0.87
HTT-209ENST00000512068 C6orf229H3BNL8 230 aa9.62□□□□□ -0.87
HTT-209ENST00000512068 KDM4AO75164 1064 aa9.62□□□□□ -0.87
HTT-209ENST00000512068 APPP05067 770 aa9.62□□□□□ -0.87
HTT-209ENST00000512068 SRGNP10124 158 aa9.62□□□□□ -0.87
HTT-209ENST00000512068 PDE6AP16499 860 aa9.62□□□□□ -0.87
HTT-209ENST00000512068 CASTP20810 708 aaKnown RBP9.62□□□□□ -0.87
HTT-209ENST00000512068 CHAF1AQ13111 956 aaPredicted RBP9.62□□□□□ -0.87
HTT-209ENST00000512068 MYSM1Q5VVJ2 828 aa9.62□□□□□ -0.87
HTT-209ENST00000512068 SP8Q8IXZ3 490 aa9.62□□□□□ -0.87
HTT-209ENST00000512068 CNKSR1Q969H4 720 aa9.62□□□□□ -0.87
HTT-209ENST00000512068 FAM84BQ96KN1 310 aaPredicted RBP9.62□□□□□ -0.87
HTT-209ENST00000512068 JAKMIP1Q96N16 626 aaKnown RBP9.62□□□□□ -0.87
HTT-209ENST00000512068 SEC62Q99442 399 aaKnown RBP9.62□□□□□ -0.87
HTT-209ENST00000512068 EYA3Q99504 573 aa9.62□□□□□ -0.87
HTT-209ENST00000512068 KIF2CQ99661 725 aa9.62□□□□□ -0.87
HTT-209ENST00000512068 PIH1D3Q9NQM4 214 aaKnown RBP9.62□□□□□ -0.87
HTT-209ENST00000512068 PALD1Q9ULE6 856 aa9.62□□□□□ -0.87
HTT-209ENST00000512068 SNX14Q9Y5W7 946 aa9.62□□□□□ -0.87
HTT-209ENST00000512068 CYP46A1Q9Y6A2 500 aa9.62□□□□□ -0.87
HTT-209ENST00000512068 DUOX1Q9NRD9 1551 aa9.62□□□□□ -0.87
HTT-209ENST00000512068 LRRC37AA6NMS7 1700 aa9.62□□□□□ -0.87
HTT-209ENST00000512068 PDS5AQ29RF7 1337 aaKnown RBP9.61□□□□□ -0.87
HTT-209ENST00000512068 MAST2Q6P0Q8 1798 aa9.61□□□□□ -0.87
HTT-209ENST00000512068 M0R2C6 588 aa9.61□□□□□ -0.87
HTT-209ENST00000512068 SLC27A2O14975 620 aa9.61□□□□□ -0.87
HTT-209ENST00000512068 GPAA1O43292 621 aa9.61□□□□□ -0.87
HTT-209ENST00000512068 RNF40O75150 1001 aa9.61□□□□□ -0.87
HTT-209ENST00000512068 GNAT2P19087 354 aa9.61□□□□□ -0.87
HTT-209ENST00000512068 POLD1P28340 1107 aa9.61□□□□□ -0.87
HTT-209ENST00000512068 USP46P62068 366 aa9.61□□□□□ -0.87
HTT-209ENST00000512068 GPSM2P81274 684 aa9.61□□□□□ -0.87
HTT-209ENST00000512068 FGD1P98174 961 aa9.61□□□□□ -0.87
HTT-209ENST00000512068 IMMTQ16891 758 aaKnown RBP9.61□□□□□ -0.87
HTT-209ENST00000512068 STYK1Q6J9G0 422 aa9.61□□□□□ -0.87
HTT-209ENST00000512068 TMED8Q6PL24 325 aaPredicted RBP9.61□□□□□ -0.87
HTT-209ENST00000512068 BLOC1S2Q6QNY1 142 aa9.61□□□□□ -0.87
HTT-209ENST00000512068 FBXO33Q7Z6M2 555 aa9.61□□□□□ -0.87
HTT-209ENST00000512068 MPNDQ8N594 471 aa9.61□□□□□ -0.87
HTT-209ENST00000512068 WDR66Q8TBY9 1149 aa9.61□□□□□ -0.87
HTT-209ENST00000512068 NOL10Q9BSC4 688 aaKnown RBP9.61□□□□□ -0.87
HTT-209ENST00000512068 NACAP1Q9BZK3 213 aa9.61□□□□□ -0.87
HTT-209ENST00000512068 SLKQ9H2G2 1235 aaPredicted RBP9.61□□□□□ -0.87
HTT-209ENST00000512068 COL11A2P13942 1736 aaPredicted RBP9.61□□□□□ -0.87
HTT-209ENST00000512068 IGSF3O75054 1194 aa9.6□□□□□ -0.87
HTT-209ENST00000512068 HMGB1P09429 215 aaKnown RBP9.6□□□□□ -0.87
HTT-209ENST00000512068 HSPD1P10809 573 aaKnown RBP9.6□□□□□ -0.87
HTT-209ENST00000512068 CYP7A1P22680 504 aa9.6□□□□□ -0.87
HTT-209ENST00000512068 NECTIN1Q15223 517 aa9.6□□□□□ -0.87
HTT-209ENST00000512068 ANKRD1Q15327 319 aa9.6□□□□□ -0.87
HTT-209ENST00000512068 NAA16Q6N069 864 aaPredicted RBP9.6□□□□□ -0.87
HTT-209ENST00000512068 DPP8Q6V1X1 898 aaPredicted RBP9.6□□□□□ -0.87
HTT-209ENST00000512068 C15orf52Q6ZUT6 534 aaKnown RBP9.6□□□□□ -0.87
HTT-209ENST00000512068 DZIP1Q86YF9 867 aaKnown RBP9.6□□□□□ -0.87
HTT-209ENST00000512068 OSBP2Q969R2 916 aa9.6□□□□□ -0.87
HTT-209ENST00000512068 UPF3BQ9BZI7 483 aaKnown RBP9.6□□□□□ -0.87
HTT-209ENST00000512068 TM6SF1Q9BZW5 370 aa9.6□□□□□ -0.87
HTT-209ENST00000512068 ZC3H12CQ9C0D7 883 aaKnown RBP9.6□□□□□ -0.87
HTT-209ENST00000512068 PDRG1Q9NUG6 133 aa9.6□□□□□ -0.87
HTT-209ENST00000512068 PODXL2Q9NZ53 605 aa9.6□□□□□ -0.87
HTT-209ENST00000512068 WWC3Q9ULE0 1092 aa9.6□□□□□ -0.87
HTT-209ENST00000512068 ATP6V0A2Q9Y487 856 aa9.6□□□□□ -0.87
HTT-209ENST00000512068 MAGEB6P1A0A0J9YX57 407 aa9.59□□□□□ -0.87
HTT-209ENST00000512068 MBD4O95243 580 aa9.59□□□□□ -0.87
HTT-209ENST00000512068 CFHP08603 1231 aa9.59□□□□□ -0.87
HTT-209ENST00000512068 KLRK1P26718 216 aa9.59□□□□□ -0.87
HTT-209ENST00000512068 GJA5P36382 358 aa9.59□□□□□ -0.87
HTT-209ENST00000512068 GSTO1P78417 241 aa9.59□□□□□ -0.87
HTT-209ENST00000512068 NOL8Q76FK4 1167 aaKnown RBP9.59□□□□□ -0.87
HTT-209ENST00000512068 IL17RAQ96F46 866 aa9.59□□□□□ -0.87
HTT-209ENST00000512068 PUS7LQ9H0K6 701 aaKnown RBP9.59□□□□□ -0.87
HTT-209ENST00000512068 TSR3Q9UJK0 312 aaKnown RBP9.59□□□□□ -0.87
HTT-209ENST00000512068 ZNF213O14771 459 aa9.58□□□□□ -0.88
HTT-209ENST00000512068 CHGBP05060 677 aa9.58□□□□□ -0.88
HTT-209ENST00000512068 LDHBP07195 334 aaKnown RBP9.58□□□□□ -0.88
HTT-209ENST00000512068 TDO2P48775 406 aa9.58□□□□□ -0.88
HTT-209ENST00000512068 PPP4CP60510 307 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms