RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 GJA5P36382 358 aa7.22□□□□□ -1.25
RNF4-217ENST00000511892 DIXDC1Q155Q3 683 aa7.22□□□□□ -1.25
RNF4-217ENST00000511892 HHIPL2Q6UWX4 724 aa7.22□□□□□ -1.25
RNF4-217ENST00000511892 SLC10A4Q96EP9 437 aa7.22□□□□□ -1.25
RNF4-217ENST00000511892 XAGE2Q96GT9 111 aa7.22□□□□□ -1.25
RNF4-217ENST00000511892 MCOLN1Q9GZU1 580 aa7.22□□□□□ -1.25
RNF4-217ENST00000511892 R3HDMLQ9H3Y0 253 aa7.22□□□□□ -1.25
RNF4-217ENST00000511892 ZSWIM6Q9HCJ5 1215 aa7.22□□□□□ -1.25
RNF4-217ENST00000511892 STK24Q9Y6E0 443 aa7.22□□□□□ -1.25
RNF4-217ENST00000511892 MAST3O60307 1309 aa7.22□□□□□ -1.25
RNF4-217ENST00000511892 SALL1Q9NSC2 1324 aa7.22□□□□□ -1.25
RNF4-217ENST00000511892 ATAD5Q96QE3 1844 aa7.22□□□□□ -1.25
RNF4-217ENST00000511892 MAST2Q6P0Q8 1798 aa7.21□□□□□ -1.25
RNF4-217ENST00000511892 SEMA3EO15041 775 aa7.21□□□□□ -1.26
RNF4-217ENST00000511892 NEFLP07196 543 aa7.21□□□□□ -1.26
RNF4-217ENST00000511892 ZBTB48P10074 688 aaPredicted RBP7.21□□□□□ -1.26
RNF4-217ENST00000511892 IREB2P48200 963 aaKnown RBP7.21□□□□□ -1.26
RNF4-217ENST00000511892 TNNI2P48788 182 aa7.21□□□□□ -1.26
RNF4-217ENST00000511892 ATP8B2P98198 1209 aa7.21□□□□□ -1.26
RNF4-217ENST00000511892 DGKZQ13574 1117 aa7.21□□□□□ -1.26
RNF4-217ENST00000511892 TNFAIP1Q13829 316 aa7.21□□□□□ -1.26
RNF4-217ENST00000511892 RASGRF1Q13972 1273 aa7.21□□□□□ -1.26
RNF4-217ENST00000511892 FKBP1CQ5VVH2 108 aa7.21□□□□□ -1.26
RNF4-217ENST00000511892 ERICH6BQ5W0A0 696 aa7.21□□□□□ -1.26
RNF4-217ENST00000511892 CDC42EP5Q6NZY7 148 aa7.21□□□□□ -1.26
RNF4-217ENST00000511892 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.21□□□□□ -1.26
RNF4-217ENST00000511892 FAM83AQ86UY5 434 aa7.21□□□□□ -1.26
RNF4-217ENST00000511892 ANKRD13AQ8IZ07 590 aa7.21□□□□□ -1.26
RNF4-217ENST00000511892 SSH3Q8TE77 659 aa7.21□□□□□ -1.26
RNF4-217ENST00000511892 C1orf115Q9H7X2 142 aa7.21□□□□□ -1.26
RNF4-217ENST00000511892 GNL3LQ9NVN8 582 aaKnown RBP7.21□□□□□ -1.26
RNF4-217ENST00000511892 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.21□□□□□ -1.26
RNF4-217ENST00000511892 DENND2AQ9ULE3 1009 aa7.21□□□□□ -1.26
RNF4-217ENST00000511892 DAGLAQ9Y4D2 1042 aa7.21□□□□□ -1.26
RNF4-217ENST00000511892 PDS5AQ29RF7 1337 aaKnown RBP7.21□□□□□ -1.26
RNF4-217ENST00000511892 MKI67P46013 3256 aaKnown RBP7.21□□□□□ -1.26
RNF4-217ENST00000511892 ZSWIM8A7E2V4 1837 aa7.2□□□□□ -1.26
RNF4-217ENST00000511892 DOCK1Q14185 1865 aa7.2□□□□□ -1.26
RNF4-217ENST00000511892 IGF2BP3O00425 579 aaKnown RBP eCLIP7.2□□□□□ -1.26
RNF4-217ENST00000511892 LDHBP07195 334 aaKnown RBP7.2□□□□□ -1.26
RNF4-217ENST00000511892 SREBF2Q12772 1141 aa7.2□□□□□ -1.26
RNF4-217ENST00000511892 NFIAQ12857 509 aa7.2□□□□□ -1.26
RNF4-217ENST00000511892 G3BP1Q13283 466 aaKnown RBP eCLIP7.2□□□□□ -1.26
RNF4-217ENST00000511892 VGLL4Q14135 290 aa7.2□□□□□ -1.26
RNF4-217ENST00000511892 FTSJ3Q8IY81 847 aaKnown RBP7.2□□□□□ -1.26
RNF4-217ENST00000511892 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.2□□□□□ -1.26
RNF4-217ENST00000511892 PANK1Q8TE04 598 aa7.2□□□□□ -1.26
RNF4-217ENST00000511892 ZNF384Q8TF68 577 aa7.2□□□□□ -1.26
RNF4-217ENST00000511892 NEUROD6Q96NK8 337 aa7.2□□□□□ -1.26
RNF4-217ENST00000511892 PTPN18Q99952 460 aa7.2□□□□□ -1.26
RNF4-217ENST00000511892 CFHR5Q9BXR6 569 aa7.2□□□□□ -1.26
RNF4-217ENST00000511892 ELP3Q9H9T3 547 aa7.2□□□□□ -1.26
RNF4-217ENST00000511892 FAM198AQ9UFP1 575 aa7.2□□□□□ -1.26
RNF4-217ENST00000511892 AKAP2Q9Y2D5 859 aa7.2□□□□□ -1.26
RNF4-217ENST00000511892 SIPA1L1O43166 1804 aa7.2□□□□□ -1.26
RNF4-217ENST00000511892 RPAP1Q9BWH6 1393 aaPredicted RBP7.2□□□□□ -1.26
RNF4-217ENST00000511892 MGAMO43451 1857 aa7.19□□□□□ -1.26
RNF4-217ENST00000511892 MYH1P12882 1939 aa7.19□□□□□ -1.26
RNF4-217ENST00000511892 TESPA1A2RU30 521 aaPredicted RBP7.19□□□□□ -1.26
RNF4-217ENST00000511892 MANSC4A6NHS7 340 aaPredicted RBP7.19□□□□□ -1.26
RNF4-217ENST00000511892 CCDC85CA6NKD9 419 aa7.19□□□□□ -1.26
RNF4-217ENST00000511892 GPR25O00155 361 aa7.19□□□□□ -1.26
RNF4-217ENST00000511892 INHBEP58166 350 aa7.19□□□□□ -1.26
RNF4-217ENST00000511892 MAP3K9P80192 1104 aa7.19□□□□□ -1.26
RNF4-217ENST00000511892 MVPQ14764 893 aaKnown RBP7.19□□□□□ -1.26
RNF4-217ENST00000511892 NOM1Q5C9Z4 860 aaKnown RBP7.19□□□□□ -1.26
RNF4-217ENST00000511892 PI16Q6UXB8 463 aa7.19□□□□□ -1.26
RNF4-217ENST00000511892 ITPRIPQ8IWB1 547 aa7.19□□□□□ -1.26
RNF4-217ENST00000511892 ZFPM1Q8IX07 1006 aa7.19□□□□□ -1.26
RNF4-217ENST00000511892 ZNF296Q8WUU4 475 aaPredicted RBP7.19□□□□□ -1.26
RNF4-217ENST00000511892 FAM151AQ8WW52 585 aa7.19□□□□□ -1.26
RNF4-217ENST00000511892 OPTNQ96CV9 577 aa7.19□□□□□ -1.26
RNF4-217ENST00000511892 USP40Q9NVE5 1235 aa7.19□□□□□ -1.26
RNF4-217ENST00000511892 TMOD2Q9NZR1 351 aa7.19□□□□□ -1.26
RNF4-217ENST00000511892 HMG20BQ9P0W2 317 aa7.19□□□□□ -1.26
RNF4-217ENST00000511892 PDE4DIPQ5VU43 2346 aa7.19□□□□□ -1.26
RNF4-217ENST00000511892 GAKO14976 1311 aa7.19□□□□□ -1.26
RNF4-217ENST00000511892 RFX7Q2KHR2 1363 aa7.19□□□□□ -1.26
RNF4-217ENST00000511892 ALDH1A1P00352 501 aa7.18□□□□□ -1.26
RNF4-217ENST00000511892 NUDT7P0C024 238 aa7.18□□□□□ -1.26
RNF4-217ENST00000511892 ARID4AP29374 1257 aaPredicted RBP7.18□□□□□ -1.26
RNF4-217ENST00000511892 MCAMP43121 646 aa7.18□□□□□ -1.26
RNF4-217ENST00000511892 MECOMQ03112 1051 aa7.18□□□□□ -1.26
RNF4-217ENST00000511892 TCP10Q12799 353 aa7.18□□□□□ -1.26
RNF4-217ENST00000511892 TNNI3KQ59H18 835 aa7.18□□□□□ -1.26
RNF4-217ENST00000511892 TBC1D9Q6ZT07 1266 aa7.18□□□□□ -1.26
RNF4-217ENST00000511892 MIGA2Q7L4E1 593 aa7.18□□□□□ -1.26
RNF4-217ENST00000511892 CTU1Q7Z7A3 348 aaKnown RBP7.18□□□□□ -1.26
RNF4-217ENST00000511892 ZGPATQ8N5A5 531 aaKnown RBP7.18□□□□□ -1.26
RNF4-217ENST00000511892 SPATA5Q8NB90 893 aa7.18□□□□□ -1.26
RNF4-217ENST00000511892 ZKSCAN4Q969J2 545 aaPredicted RBP7.18□□□□□ -1.26
RNF4-217ENST00000511892 WRNIP1Q96S55 665 aa7.18□□□□□ -1.26
RNF4-217ENST00000511892 ABCF2Q9UG63 623 aa7.18□□□□□ -1.26
RNF4-217ENST00000511892 ZNF112Q9UJU3 913 aa7.18□□□□□ -1.26
RNF4-217ENST00000511892 NOP58Q9Y2X3 529 aaKnown RBP7.18□□□□□ -1.26
RNF4-217ENST00000511892 SNCAIPQ9Y6H5 919 aa7.18□□□□□ -1.26
RNF4-217ENST00000511892 FPGT-TNNI3KV9GXZ4 949 aa7.18□□□□□ -1.26
RNF4-217ENST00000511892 MYH7P12883 1935 aa7.18□□□□□ -1.26
RNF4-217ENST00000511892 DOCK3Q8IZD9 2030 aa7.18□□□□□ -1.26
RNF4-217ENST00000511892 ATRNL1Q5VV63 1379 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms