RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 IDI2Q9BXS1 227 aa16.27■□□□□ 0.2
RNF4-215ENST00000511843 MYH1P12882 1939 aa16.26■□□□□ 0.19
RNF4-215ENST00000511843 DDTLA6NHG4 134 aaPredicted RBP16.26■□□□□ 0.19
RNF4-215ENST00000511843 GSTO1P78417 241 aa16.26■□□□□ 0.19
RNF4-215ENST00000511843 NAA16Q6N069 864 aaPredicted RBP16.26■□□□□ 0.19
RNF4-215ENST00000511843 IFNL1Q8IU54 200 aa16.26■□□□□ 0.19
RNF4-215ENST00000511843 KIF1BPQ96EK5 621 aa16.26■□□□□ 0.19
RNF4-215ENST00000511843 ZNF512BQ96KM6 892 aaPredicted RBP16.26■□□□□ 0.19
RNF4-215ENST00000511843 ZNF341Q9BYN7 854 aa16.26■□□□□ 0.19
RNF4-215ENST00000511843 CHMP4BQ9H444 224 aaKnown RBP16.26■□□□□ 0.19
RNF4-215ENST00000511843 ANTXR1Q9H6X2 564 aa16.26■□□□□ 0.19
RNF4-215ENST00000511843 ATRNL1Q5VV63 1379 aa16.26■□□□□ 0.19
RNF4-215ENST00000511843 PHIPQ8WWQ0 1821 aa16.25■□□□□ 0.19
RNF4-215ENST00000511843 ENTPD3O75355 529 aa16.25■□□□□ 0.19
RNF4-215ENST00000511843 LDHCP07864 332 aa16.25■□□□□ 0.19
RNF4-215ENST00000511843 RRP1P56182 461 aaKnown RBP16.25■□□□□ 0.19
RNF4-215ENST00000511843 SH3RF3Q8TEJ3 882 aaPredicted RBP16.25■□□□□ 0.19
RNF4-215ENST00000511843 HOOK2Q96ED9 719 aa16.25■□□□□ 0.19
RNF4-215ENST00000511843 AATFQ9NY61 560 aaKnown RBP eCLIP16.25■□□□□ 0.19
RNF4-215ENST00000511843 MYH7P12883 1935 aa16.25■□□□□ 0.19
RNF4-215ENST00000511843 PTPRFP10586 1907 aa16.24■□□□□ 0.19
RNF4-215ENST00000511843 SPDYE5A6NIY4 337 aa16.24■□□□□ 0.19
RNF4-215ENST00000511843 FAM196BA6NMK8 535 aa16.24■□□□□ 0.19
RNF4-215ENST00000511843 SMARCA5O60264 1052 aaPredicted RBP16.24■□□□□ 0.19
RNF4-215ENST00000511843 IDH1O75874 414 aaKnown RBP16.24■□□□□ 0.19
RNF4-215ENST00000511843 DGKZQ13574 1117 aa16.24■□□□□ 0.19
RNF4-215ENST00000511843 CLASRPQ8N2M8 674 aaKnown RBP16.24■□□□□ 0.19
RNF4-215ENST00000511843 PTPN18Q99952 460 aa16.24■□□□□ 0.19
RNF4-215ENST00000511843 MCOLN1Q9GZU1 580 aa16.24■□□□□ 0.19
RNF4-215ENST00000511843 IFIT2P09913 472 aaKnown RBP16.23■□□□□ 0.19
RNF4-215ENST00000511843 TEX11Q8IYF3 940 aa16.23■□□□□ 0.19
RNF4-215ENST00000511843 ZNF296Q8WUU4 475 aaPredicted RBP16.23■□□□□ 0.19
RNF4-215ENST00000511843 BRI3BPQ8WY22 251 aa16.23■□□□□ 0.19
RNF4-215ENST00000511843 ABHD8Q96I13 439 aa16.23■□□□□ 0.19
RNF4-215ENST00000511843 MS4A4AQ96JQ5 239 aa16.23■□□□□ 0.19
RNF4-215ENST00000511843 ZSWIM8A7E2V4 1837 aa16.22■□□□□ 0.19
RNF4-215ENST00000511843 CCL15-CCL14A0A0B4J2E2 113 aa16.22■□□□□ 0.19
RNF4-215ENST00000511843 RAB11FIP3O75154 756 aa16.22■□□□□ 0.19
RNF4-215ENST00000511843 DYNLL1P63167 89 aaKnown RBP16.22■□□□□ 0.19
RNF4-215ENST00000511843 CCL15Q16663 113 aa16.22■□□□□ 0.19
RNF4-215ENST00000511843 ERO1BQ86YB8 467 aa16.22■□□□□ 0.19
RNF4-215ENST00000511843 EDC3Q96F86 508 aaKnown RBP16.22■□□□□ 0.19
RNF4-215ENST00000511843 NOL10Q9BSC4 688 aaKnown RBP16.22■□□□□ 0.19
RNF4-215ENST00000511843 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.22■□□□□ 0.19
RNF4-215ENST00000511843 ZNF112Q9UJU3 913 aa16.22■□□□□ 0.19
RNF4-215ENST00000511843 PHF20L1A8MW92 1017 aa16.21■□□□□ 0.19
RNF4-215ENST00000511843 GPR25O00155 361 aa16.21■□□□□ 0.19
RNF4-215ENST00000511843 IRF6O14896 467 aa16.21■□□□□ 0.19
RNF4-215ENST00000511843 CYP7A1P22680 504 aa16.21■□□□□ 0.19
RNF4-215ENST00000511843 INHBEP58166 350 aa16.21■□□□□ 0.19
RNF4-215ENST00000511843 MAGEB6Q8N7X4 407 aa16.21■□□□□ 0.19
RNF4-215ENST00000511843 MIGA1Q8NAN2 632 aa16.21■□□□□ 0.19
RNF4-215ENST00000511843 DNAJC2Q99543 621 aaKnown RBP16.21■□□□□ 0.19
RNF4-215ENST00000511843 OSBPL5Q9H0X9 879 aaPredicted RBP16.21■□□□□ 0.19
RNF4-215ENST00000511843 NAV1Q8NEY1 1877 aa16.2■□□□□ 0.18
RNF4-215ENST00000511843 TESPA1A2RU30 521 aaPredicted RBP16.2■□□□□ 0.18
RNF4-215ENST00000511843 CRHR2Q13324 411 aa16.2■□□□□ 0.18
RNF4-215ENST00000511843 MAPKAPK5Q8IW41 473 aa16.2■□□□□ 0.18
RNF4-215ENST00000511843 TGFBRAP1Q8WUH2 860 aa16.2■□□□□ 0.18
RNF4-215ENST00000511843 CRBNQ96SW2 442 aa16.2■□□□□ 0.18
RNF4-215ENST00000511843 PCDHB15Q9Y5E8 787 aa16.2■□□□□ 0.18
RNF4-215ENST00000511843 COL2A1P02458 1487 aaPredicted RBP16.19■□□□□ 0.18
RNF4-215ENST00000511843 GOLIM4O00461 696 aa16.19■□□□□ 0.18
RNF4-215ENST00000511843 ALDH1A1P00352 501 aa16.19■□□□□ 0.18
RNF4-215ENST00000511843 GTF2A2P52657 109 aa16.19■□□□□ 0.18
RNF4-215ENST00000511843 PPIL2Q13356 520 aa16.19■□□□□ 0.18
RNF4-215ENST00000511843 SLC4A8Q2Y0W8 1093 aa16.19■□□□□ 0.18
RNF4-215ENST00000511843 CCDC84Q86UT8 332 aaPredicted RBP16.19■□□□□ 0.18
RNF4-215ENST00000511843 FAM43AQ8N2R8 423 aa16.19■□□□□ 0.18
RNF4-215ENST00000511843 LRRCC1Q9C099 1032 aa16.19■□□□□ 0.18
RNF4-215ENST00000511843 BAG3O95817 575 aa16.18■□□□□ 0.18
RNF4-215ENST00000511843 PPP4CP60510 307 aa16.18■□□□□ 0.18
RNF4-215ENST00000511843 NOL9Q5SY16 702 aaKnown RBP16.18■□□□□ 0.18
RNF4-215ENST00000511843 CFHR5Q9BXR6 569 aa16.18■□□□□ 0.18
RNF4-215ENST00000511843 BOLA2Q9H3K6 86 aa16.18■□□□□ 0.18
RNF4-215ENST00000511843 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.18■□□□□ 0.18
RNF4-215ENST00000511843 SAP30BPQ9UHR5 308 aaKnown RBP16.18■□□□□ 0.18
RNF4-215ENST00000511843 DDX60LQ5H9U9 1706 aaKnown RBP16.18■□□□□ 0.18
RNF4-215ENST00000511843 FLT1P17948 1338 aa16.18■□□□□ 0.18
RNF4-215ENST00000511843 BAZ2AQ9UIF9 1905 aaKnown RBP16.17■□□□□ 0.18
RNF4-215ENST00000511843 BTBD19C9JJ37 291 aa16.17■□□□□ 0.18
RNF4-215ENST00000511843 FKTNO75072 461 aa16.17■□□□□ 0.18
RNF4-215ENST00000511843 NPM3O75607 178 aaKnown RBP16.17■□□□□ 0.18
RNF4-215ENST00000511843 MAP4K4O95819 1239 aaPredicted RBP16.17■□□□□ 0.18
RNF4-215ENST00000511843 PLCG2P16885 1265 aa16.17■□□□□ 0.18
RNF4-215ENST00000511843 PPATQ06203 517 aa16.17■□□□□ 0.18
RNF4-215ENST00000511843 MAP3K12Q12852 859 aa16.17■□□□□ 0.18
RNF4-215ENST00000511843 SNAPC2Q13487 334 aa16.17■□□□□ 0.18
RNF4-215ENST00000511843 TAF1CQ15572 869 aaPredicted RBP16.17■□□□□ 0.18
RNF4-215ENST00000511843 SLFNL1Q499Z3 407 aa16.17■□□□□ 0.18
RNF4-215ENST00000511843 OTUD7BQ6GQQ9 843 aa16.17■□□□□ 0.18
RNF4-215ENST00000511843 CTU1Q7Z7A3 348 aaKnown RBP16.17■□□□□ 0.18
RNF4-215ENST00000511843 SCYL3Q8IZE3 742 aa16.17■□□□□ 0.18
RNF4-215ENST00000511843 DCTPP1Q9H773 170 aa16.17■□□□□ 0.18
RNF4-215ENST00000511843 CCDC85CA6NKD9 419 aa16.16■□□□□ 0.18
RNF4-215ENST00000511843 CETPP11597 493 aa16.16■□□□□ 0.18
RNF4-215ENST00000511843 PDE6AP16499 860 aa16.16■□□□□ 0.18
RNF4-215ENST00000511843 MAP3K10Q02779 954 aa16.16■□□□□ 0.18
RNF4-215ENST00000511843 RRP1BQ14684 758 aaKnown RBP16.16■□□□□ 0.18
RNF4-215ENST00000511843 TSHZ3Q63HK5 1081 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms