RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 REM2Q8IYK8 340 aaPredicted RBP15.16■□□□□ 0.02
PTCD2-209ENST00000511752 HAUS7Q99871 368 aa15.16■□□□□ 0.02
PTCD2-209ENST00000511752 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.16■□□□□ 0.02
PTCD2-209ENST00000511752 PPP4CP60510 307 aa15.15■□□□□ 0.02
PTCD2-209ENST00000511752 MAP3K9P80192 1104 aa15.15■□□□□ 0.02
PTCD2-209ENST00000511752 KIF23Q02241 960 aaPredicted RBP15.15■□□□□ 0.02
PTCD2-209ENST00000511752 C1QBPQ07021 282 aaKnown RBP15.15■□□□□ 0.02
PTCD2-209ENST00000511752 ANKRD45Q5TZF3 282 aa15.15■□□□□ 0.02
PTCD2-209ENST00000511752 ADGRA1Q86SQ6 560 aa15.15■□□□□ 0.02
PTCD2-209ENST00000511752 ZNF341Q9BYN7 854 aa15.15■□□□□ 0.02
PTCD2-209ENST00000511752 DDX4Q9NQI0 724 aaKnown RBP15.15■□□□□ 0.02
PTCD2-209ENST00000511752 CSADQ9Y600 493 aa15.15■□□□□ 0.02
PTCD2-209ENST00000511752 CDK5RAP2Q96SN8 1893 aa15.14■□□□□ 0.01
PTCD2-209ENST00000511752 SPRYD7Q5W111 196 aa15.14■□□□□ 0.01
PTCD2-209ENST00000511752 MIGA2Q7L4E1 593 aa15.14■□□□□ 0.01
PTCD2-209ENST00000511752 ZFPM1Q8IX07 1006 aa15.14■□□□□ 0.01
PTCD2-209ENST00000511752 SH3RF3Q8TEJ3 882 aaPredicted RBP15.14■□□□□ 0.01
PTCD2-209ENST00000511752 CLMNQ96JQ2 1002 aa15.14■□□□□ 0.01
PTCD2-209ENST00000511752 CSRNP1Q96S65 589 aa15.14■□□□□ 0.01
PTCD2-209ENST00000511752 ZIC5Q96T25 663 aa15.14■□□□□ 0.01
PTCD2-209ENST00000511752 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.14■□□□□ 0.01
PTCD2-209ENST00000511752 FOCADQ5VW36 1801 aa15.14■□□□□ 0.01
PTCD2-209ENST00000511752 TTC41PQ6P2S7 1318 aa15.14■□□□□ 0.01
PTCD2-209ENST00000511752 COL2A1P02458 1487 aaPredicted RBP15.14■□□□□ 0.01
PTCD2-209ENST00000511752 MYH7P12883 1935 aa15.13■□□□□ 0.01
PTCD2-209ENST00000511752 ERC2O15083 957 aa15.13■□□□□ 0.01
PTCD2-209ENST00000511752 FOXN1O15353 648 aa15.13■□□□□ 0.01
PTCD2-209ENST00000511752 CA12O43570 354 aa15.13■□□□□ 0.01
PTCD2-209ENST00000511752 ZBTB48P10074 688 aaPredicted RBP15.13■□□□□ 0.01
PTCD2-209ENST00000511752 PDE6AP16499 860 aa15.13■□□□□ 0.01
PTCD2-209ENST00000511752 IRX6P78412 446 aaPredicted RBP15.13■□□□□ 0.01
PTCD2-209ENST00000511752 SLC9C2Q5TAH2 1124 aa15.13■□□□□ 0.01
PTCD2-209ENST00000511752 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.13■□□□□ 0.01
PTCD2-209ENST00000511752 EDC3Q96F86 508 aaKnown RBP15.13■□□□□ 0.01
PTCD2-209ENST00000511752 WRNIP1Q96S55 665 aa15.13■□□□□ 0.01
PTCD2-209ENST00000511752 ATRNL1Q5VV63 1379 aa15.12■□□□□ 0.01
PTCD2-209ENST00000511752 DDTLA6NHG4 134 aaPredicted RBP15.12■□□□□ 0.01
PTCD2-209ENST00000511752 CTCFP49711 727 aaPredicted RBP15.12■□□□□ 0.01
PTCD2-209ENST00000511752 DYNLL1P63167 89 aaKnown RBP15.12■□□□□ 0.01
PTCD2-209ENST00000511752 SREBF2Q12772 1141 aa15.12■□□□□ 0.01
PTCD2-209ENST00000511752 MKRN3Q13064 507 aaKnown RBP15.12■□□□□ 0.01
PTCD2-209ENST00000511752 ZSCAN25Q6NSZ9 544 aa15.12■□□□□ 0.01
PTCD2-209ENST00000511752 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.12■□□□□ 0.01
PTCD2-209ENST00000511752 MIGA1Q8NAN2 632 aa15.12■□□□□ 0.01
PTCD2-209ENST00000511752 TGFBRAP1Q8WUH2 860 aa15.12■□□□□ 0.01
PTCD2-209ENST00000511752 WNK4Q96J92 1243 aa15.12■□□□□ 0.01
PTCD2-209ENST00000511752 OSBPL5Q9H0X9 879 aaPredicted RBP15.12■□□□□ 0.01
PTCD2-209ENST00000511752 ELP3Q9H9T3 547 aa15.12■□□□□ 0.01
PTCD2-209ENST00000511752 LAMB1P07942 1786 aa15.11■□□□□ 0.01
PTCD2-209ENST00000511752 MAGEB6P1A0A0J9YX57 407 aa15.11■□□□□ 0.01
PTCD2-209ENST00000511752 MX1P20591 662 aa15.11■□□□□ 0.01
PTCD2-209ENST00000511752 VGLL4Q14135 290 aa15.11■□□□□ 0.01
PTCD2-209ENST00000511752 SH3BP5LQ7L8J4 393 aa15.11■□□□□ 0.01
PTCD2-209ENST00000511752 DHX36Q9H2U1 1008 aaKnown RBP15.11■□□□□ 0.01
PTCD2-209ENST00000511752 ZNF532Q9HCE3 1301 aa15.11■□□□□ 0.01
PTCD2-209ENST00000511752 MANSC4A6NHS7 340 aaPredicted RBP15.1■□□□□ 0.01
PTCD2-209ENST00000511752 GLRX3O76003 335 aaKnown RBP15.1■□□□□ 0.01
PTCD2-209ENST00000511752 USP5P45974 858 aa15.1■□□□□ 0.01
PTCD2-209ENST00000511752 TSHZ3Q63HK5 1081 aa15.1■□□□□ 0.01
PTCD2-209ENST00000511752 MAPKAPK5Q8IW41 473 aa15.1■□□□□ 0.01
PTCD2-209ENST00000511752 SMC5Q8IY18 1101 aa15.1■□□□□ 0.01
PTCD2-209ENST00000511752 OPTNQ96CV9 577 aa15.1■□□□□ 0.01
PTCD2-209ENST00000511752 ZNF112Q9UJU3 913 aa15.1■□□□□ 0.01
PTCD2-209ENST00000511752 FLT1P17948 1338 aa15.1■□□□□ 0.01
PTCD2-209ENST00000511752 MYH1P12882 1939 aa15.09■□□□□ 0.01
PTCD2-209ENST00000511752 TCRBV5S4A2TA0A5A2 114 aa15.09■□□□□ 0.01
PTCD2-209ENST00000511752 TBC1D12O60347 775 aa15.09■□□□□ 0.01
PTCD2-209ENST00000511752 IGHDP01880 384 aa15.09■□□□□ 0.01
PTCD2-209ENST00000511752 ADD2P35612 726 aa15.09■□□□□ 0.01
PTCD2-209ENST00000511752 TM4SF4P48230 202 aa15.09■□□□□ 0.01
PTCD2-209ENST00000511752 INHBEP58166 350 aa15.09■□□□□ 0.01
PTCD2-209ENST00000511752 UBE3CQ15386 1083 aa15.09■□□□□ 0.01
PTCD2-209ENST00000511752 ERO1BQ86YB8 467 aa15.09■□□□□ 0.01
PTCD2-209ENST00000511752 OTUD7AQ8TE49 926 aaPredicted RBP15.09■□□□□ 0.01
PTCD2-209ENST00000511752 ZKSCAN4Q969J2 545 aaPredicted RBP15.09■□□□□ 0.01
PTCD2-209ENST00000511752 CRNKL1Q9BZJ0 848 aaKnown RBP15.09■□□□□ 0.01
PTCD2-209ENST00000511752 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.09■□□□□ 0.01
PTCD2-209ENST00000511752 SAGE1Q9NXZ1 904 aa15.09■□□□□ 0.01
PTCD2-209ENST00000511752 SNCAIPQ9Y6H5 919 aa15.09■□□□□ 0.01
PTCD2-209ENST00000511752 SPDYE5A6NIY4 337 aa15.08■□□□□ 0
PTCD2-209ENST00000511752 HLA-DOAP06340 250 aa15.08■□□□□ 0
PTCD2-209ENST00000511752 HSPA8P11142 646 aaKnown RBP15.08■□□□□ 0
PTCD2-209ENST00000511752 INPP5BP32019 993 aa15.08■□□□□ 0
PTCD2-209ENST00000511752 MAP3K10Q02779 954 aa15.08■□□□□ 0
PTCD2-209ENST00000511752 LRRFIP1Q32MZ4 808 aaKnown RBP15.08■□□□□ 0
PTCD2-209ENST00000511752 NOL9Q5SY16 702 aaKnown RBP15.08■□□□□ 0
PTCD2-209ENST00000511752 KBTBD3Q8NAB2 608 aa15.08■□□□□ 0
PTCD2-209ENST00000511752 PI4K2BQ8TCG2 481 aa15.08■□□□□ 0
PTCD2-209ENST00000511752 RIOK1Q9BRS2 568 aaKnown RBP15.08■□□□□ 0
PTCD2-209ENST00000511752 PI4KBQ9UBF8 816 aa15.08■□□□□ 0
PTCD2-209ENST00000511752 HERC5Q9UII4 1024 aaKnown RBP15.08■□□□□ 0
PTCD2-209ENST00000511752 GJA5P36382 358 aa15.07■□□□□ 0
PTCD2-209ENST00000511752 LBX1P52954 281 aa15.07■□□□□ 0
PTCD2-209ENST00000511752 B4GALNT3Q6L9W6 998 aa15.07■□□□□ 0
PTCD2-209ENST00000511752 OTUD5Q96G74 571 aa15.07■□□□□ 0
PTCD2-209ENST00000511752 TRIM34Q9BYJ4 488 aa15.07■□□□□ 0
PTCD2-209ENST00000511752 LNPKQ9C0E8 428 aa15.07■□□□□ 0
PTCD2-209ENST00000511752 PRDM10Q9NQV6 1147 aa15.07■□□□□ 0
PTCD2-209ENST00000511752 RNF186Q9NXI6 227 aa15.07■□□□□ 0
PTCD2-209ENST00000511752 PALD1Q9ULE6 856 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms