RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 BRF1Q92994 677 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 TBC1D32Q96NH3 1257 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 RAB3IPQ96QF0 476 aaPredicted RBP6.48□□□□□ -1.37
USP38-203ENST00000511739 RNF216Q9NWF9 866 aaPredicted RBP6.48□□□□□ -1.37
USP38-203ENST00000511739 USP25Q9UHP3 1055 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 FAM184BQ9ULE4 1060 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 MAST3O60307 1309 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 HSPA1LP34931 641 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 RAPGEF1Q13905 1077 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 EIF4A2Q14240 407 aaKnown RBP6.48□□□□□ -1.37
USP38-203ENST00000511739 DPP8Q6V1X1 898 aaPredicted RBP6.48□□□□□ -1.37
USP38-203ENST00000511739 SMC5Q8IY18 1101 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 TRMT2AQ8IZ69 625 aaKnown RBP6.48□□□□□ -1.37
USP38-203ENST00000511739 CPXCR1Q8N123 301 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 SELENOSQ9BQE4 189 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 ZSCAN16Q9H4T2 348 aaPredicted RBP6.48□□□□□ -1.37
USP38-203ENST00000511739 EXOC7Q9UPT5 735 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 BCORL1Q5H9F3 1711 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 NSMFQ6X4W1 530 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 ARHGAP27Q6ZUM4 889 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 CARD10Q9BWT7 1032 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 GPCPD1Q9NPB8 672 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 MTRF1LQ9UGC7 380 aaKnown RBP6.48□□□□□ -1.37
USP38-203ENST00000511739 KIF24Q5T7B8 1368 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 PALM3A6NDB9 673 aaPredicted RBP6.48□□□□□ -1.37
USP38-203ENST00000511739 HMGB1P1B2RPK0 211 aaPredicted RBP6.48□□□□□ -1.37
USP38-203ENST00000511739 VAMP4O75379 141 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 APBA3O96018 575 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 UBASH3AP57075 661 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 CALCOCO2Q13137 446 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 SLC39A6Q13433 755 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 SNW1Q13573 536 aaKnown RBP6.48□□□□□ -1.37
USP38-203ENST00000511739 HELBQ8NG08 1087 aaPredicted RBP6.48□□□□□ -1.37
USP38-203ENST00000511739 DHX58Q96C10 678 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 SAP30BPQ9UHR5 308 aaKnown RBP6.48□□□□□ -1.37
USP38-203ENST00000511739 MADDQ8WXG6 1647 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 AATKQ6ZMQ8 1374 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 EPB41P11171 864 aaKnown RBP6.47□□□□□ -1.37
USP38-203ENST00000511739 KRT2P35908 639 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 ZNF569Q5MCW4 686 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 SEL1L2Q5TEA6 688 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 MAGEB6Q8N7X4 407 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 ZNF830Q96NB3 372 aaPredicted RBP6.47□□□□□ -1.37
USP38-203ENST00000511739 GGA1Q9UJY5 639 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 KRT19P08727 400 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 KCNA4P22459 653 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 LIN9Q5TKA1 542 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 DTHD1Q6ZMT9 781 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 SRGAP1Q7Z6B7 1085 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 ANKRD44Q8N8A2 993 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 PAGR1Q9BTK6 254 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 PCDHB15Q9Y5E8 787 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 YEATS2Q9ULM3 1422 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 SMIM23A6NLE4 172 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 OPA1O60313 960 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 ATXN8OSP0DMR3 200 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 MCM4P33991 863 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 ZNF165P49910 485 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 ITIH3Q06033 890 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 ERCC6LQ2NKX8 1250 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 C4orf50Q6ZRC1 276 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 FNBP4Q8N3X1 1017 aaPredicted RBP6.47□□□□□ -1.37
USP38-203ENST00000511739 KCNG4Q8TDN1 519 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 CCDC42Q96M95 316 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 KCNK9Q9NPC2 374 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 RTEL1Q9NZ71 1219 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 KIAA1210Q9ULL0 1709 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 SBNO1A3KN83 1393 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 ARHGEF35A5YM69 484 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 MCM7P33993 719 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 HSP90AA4PQ58FG1 418 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 KDM2BQ8NHM5 1336 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.47□□□□□ -1.37
USP38-203ENST00000511739 PRPF6O94906 941 aaKnown RBP6.47□□□□□ -1.37
USP38-203ENST00000511739 IL13P35225 146 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 PABPC4Q13310 644 aaKnown RBP eCLIP6.47□□□□□ -1.37
USP38-203ENST00000511739 RILPL1Q5EBL4 403 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 PPANQ9NQ55 473 aaKnown RBP6.47□□□□□ -1.37
USP38-203ENST00000511739 ZBTB40Q9NUA8 1239 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 IRAK4Q9NWZ3 460 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 FAM135BQ49AJ0 1406 aa6.47□□□□□ -1.37
USP38-203ENST00000511739 INO80Q9ULG1 1556 aaPredicted RBP6.46□□□□□ -1.37
USP38-203ENST00000511739 ZNF521Q96K83 1311 aa6.46□□□□□ -1.37
USP38-203ENST00000511739 E9PCH4 1651 aa6.46□□□□□ -1.37
USP38-203ENST00000511739 MARCKSP29966 332 aaPredicted RBP6.46□□□□□ -1.37
USP38-203ENST00000511739 KRT83P78385 493 aa6.46□□□□□ -1.37
USP38-203ENST00000511739 ANKS4BQ8N8V4 417 aa6.46□□□□□ -1.37
USP38-203ENST00000511739 GLG1Q92896 1179 aa6.46□□□□□ -1.37
USP38-203ENST00000511739 C16orf45Q96MC5 204 aaPredicted RBP6.46□□□□□ -1.37
USP38-203ENST00000511739 LRRC2Q9BYS8 371 aa6.46□□□□□ -1.37
USP38-203ENST00000511739 DENND2AQ9ULE3 1009 aa6.46□□□□□ -1.37
USP38-203ENST00000511739 SPOPO43791 374 aa6.46□□□□□ -1.37
USP38-203ENST00000511739 DLGAP5Q15398 846 aa6.46□□□□□ -1.37
USP38-203ENST00000511739 MCMDC2Q4G0Z9 681 aa6.46□□□□□ -1.37
USP38-203ENST00000511739 GPR161Q8N6U8 529 aaKnown RBP6.46□□□□□ -1.37
USP38-203ENST00000511739 CABLES1Q8TDN4 633 aa6.46□□□□□ -1.37
USP38-203ENST00000511739 ATRIPQ8WXE1 791 aa6.46□□□□□ -1.37
USP38-203ENST00000511739 NEURL4Q96JN8 1562 aa6.46□□□□□ -1.38
USP38-203ENST00000511739 TLDC2A0PJX2 215 aa6.46□□□□□ -1.38
USP38-203ENST00000511739 CTAGE15A4D2H0 777 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms