RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 SURF6O75683 361 aaKnown RBP18.86■□□□□ 0.61
COL1A1-213ENST00000511732 SNAPC2Q13487 334 aa18.86■□□□□ 0.61
COL1A1-213ENST00000511732 PICALMQ13492 652 aa18.86■□□□□ 0.61
COL1A1-213ENST00000511732 NOL9Q5SY16 702 aaKnown RBP18.86■□□□□ 0.61
COL1A1-213ENST00000511732 SLF2Q8IX21 1173 aa18.86■□□□□ 0.61
COL1A1-213ENST00000511732 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.86■□□□□ 0.61
COL1A1-213ENST00000511732 PANK1Q8TE04 598 aa18.86■□□□□ 0.61
COL1A1-213ENST00000511732 DBNDD2Q9BQY9 259 aa18.86■□□□□ 0.61
COL1A1-213ENST00000511732 ZFYVE28Q9HCC9 887 aa18.86■□□□□ 0.61
COL1A1-213ENST00000511732 ZSWIM8A7E2V4 1837 aa18.86■□□□□ 0.61
COL1A1-213ENST00000511732 MAP3K10Q02779 954 aa18.85■□□□□ 0.61
COL1A1-213ENST00000511732 KCNH4Q9UQ05 1017 aa18.85■□□□□ 0.61
COL1A1-213ENST00000511732 PTPN22Q9Y2R2 807 aa18.85■□□□□ 0.61
COL1A1-213ENST00000511732 NOP58Q9Y2X3 529 aaKnown RBP18.85■□□□□ 0.61
COL1A1-213ENST00000511732 MYO5AQ9Y4I1 1855 aaKnown RBP18.85■□□□□ 0.61
COL1A1-213ENST00000511732 UQCRFS1P1P0C7P4 283 aa18.84■□□□□ 0.61
COL1A1-213ENST00000511732 OS9Q13438 667 aaPredicted RBP18.84■□□□□ 0.61
COL1A1-213ENST00000511732 MOGSQ13724 837 aa18.84■□□□□ 0.61
COL1A1-213ENST00000511732 EFCC1Q9HA90 598 aa18.84■□□□□ 0.61
COL1A1-213ENST00000511732 SNRKQ9NRH2 765 aa18.84■□□□□ 0.61
COL1A1-213ENST00000511732 RAI14Q9P0K7 980 aa18.84■□□□□ 0.61
COL1A1-213ENST00000511732 TLR2O60603 784 aa18.83■□□□□ 0.6
COL1A1-213ENST00000511732 CEP85Q6P2H3 762 aa18.83■□□□□ 0.6
COL1A1-213ENST00000511732 ZSCAN29Q8IWY8 852 aaPredicted RBP18.83■□□□□ 0.6
COL1A1-213ENST00000511732 ZCCHC17Q9NP64 241 aaKnown RBP18.83■□□□□ 0.6
COL1A1-213ENST00000511732 TTC39AQ5SRH9 613 aa18.82■□□□□ 0.6
COL1A1-213ENST00000511732 TLR7Q9NYK1 1049 aaKnown RBP18.82■□□□□ 0.6
COL1A1-213ENST00000511732 DBNLQ9UJU6 430 aaKnown RBP18.82■□□□□ 0.6
COL1A1-213ENST00000511732 MAST2Q6P0Q8 1798 aa18.82■□□□□ 0.6
COL1A1-213ENST00000511732 PHIPQ8WWQ0 1821 aa18.81■□□□□ 0.6
COL1A1-213ENST00000511732 CYP2E1P05181 493 aaPredicted RBP18.81■□□□□ 0.6
COL1A1-213ENST00000511732 LDHCP07864 332 aa18.81■□□□□ 0.6
COL1A1-213ENST00000511732 GSTO1P78417 241 aa18.81■□□□□ 0.6
COL1A1-213ENST00000511732 CCDC158Q5M9N0 1113 aa18.81■□□□□ 0.6
COL1A1-213ENST00000511732 ANKRD23Q86SG2 305 aa18.81■□□□□ 0.6
COL1A1-213ENST00000511732 SCYL3Q8IZE3 742 aa18.81■□□□□ 0.6
COL1A1-213ENST00000511732 EAF2Q96CJ1 260 aaPredicted RBP18.81■□□□□ 0.6
COL1A1-213ENST00000511732 ARHGAP39Q9C0H5 1083 aa18.81■□□□□ 0.6
COL1A1-213ENST00000511732 CCDC8Q9H0W5 538 aaPredicted RBP18.81■□□□□ 0.6
COL1A1-213ENST00000511732 LRP2BPQ9P2M1 347 aa18.81■□□□□ 0.6
COL1A1-213ENST00000511732 DOCK1Q14185 1865 aa18.81■□□□□ 0.6
COL1A1-213ENST00000511732 HTTP42858 3142 aa18.8■□□□□ 0.6
COL1A1-213ENST00000511732 TNRC18O15417 2968 aaPredicted RBP18.8■□□□□ 0.6
COL1A1-213ENST00000511732 NPM3O75607 178 aaKnown RBP18.8■□□□□ 0.6
COL1A1-213ENST00000511732 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.8■□□□□ 0.6
COL1A1-213ENST00000511732 ZHX2Q9Y6X8 837 aa18.8■□□□□ 0.6
COL1A1-213ENST00000511732 CDK5RAP2Q96SN8 1893 aa18.8■□□□□ 0.6
COL1A1-213ENST00000511732 ADGRA2Q96PE1 1338 aa18.79■□□□□ 0.6
COL1A1-213ENST00000511732 PTPRFP10586 1907 aa18.79■□□□□ 0.6
COL1A1-213ENST00000511732 FAM196BA6NMK8 535 aa18.79■□□□□ 0.6
COL1A1-213ENST00000511732 PDHXO00330 501 aa18.79■□□□□ 0.6
COL1A1-213ENST00000511732 CXCL11O14625 94 aa18.79■□□□□ 0.6
COL1A1-213ENST00000511732 PTPRAP18433 802 aa18.79■□□□□ 0.6
COL1A1-213ENST00000511732 ZAP70P43403 619 aa18.79■□□□□ 0.6
COL1A1-213ENST00000511732 GPAT2Q6NUI2 795 aa18.79■□□□□ 0.6
COL1A1-213ENST00000511732 C17orf99Q6UX52 265 aa18.79■□□□□ 0.6
COL1A1-213ENST00000511732 ADGRA1Q86SQ6 560 aa18.79■□□□□ 0.6
COL1A1-213ENST00000511732 ZNF512BQ96KM6 892 aaPredicted RBP18.79■□□□□ 0.6
COL1A1-213ENST00000511732 OSBPL5Q9H0X9 879 aaPredicted RBP18.79■□□□□ 0.6
COL1A1-213ENST00000511732 MAP4K4O95819 1239 aaPredicted RBP18.78■□□□□ 0.6
COL1A1-213ENST00000511732 CCDC84Q86UT8 332 aaPredicted RBP18.78■□□□□ 0.6
COL1A1-213ENST00000511732 SH3RF3Q8TEJ3 882 aaPredicted RBP18.78■□□□□ 0.6
COL1A1-213ENST00000511732 AATFQ9NY61 560 aaKnown RBP eCLIP18.78■□□□□ 0.6
COL1A1-213ENST00000511732 CPA4Q9UI42 421 aa18.78■□□□□ 0.6
COL1A1-213ENST00000511732 EXOC6BQ9Y2D4 811 aa18.78■□□□□ 0.6
COL1A1-213ENST00000511732 AFG3L2Q9Y4W6 797 aa18.78■□□□□ 0.6
COL1A1-213ENST00000511732 PTCH2Q9Y6C5 1203 aa18.78■□□□□ 0.6
COL1A1-213ENST00000511732 SIPA1L1O43166 1804 aa18.78■□□□□ 0.6
COL1A1-213ENST00000511732 COL2A1P02458 1487 aaPredicted RBP18.77■□□□□ 0.6
COL1A1-213ENST00000511732 POTEFA5A3E0 1075 aa18.77■□□□□ 0.6
COL1A1-213ENST00000511732 TBC1D12O60347 775 aa18.77■□□□□ 0.6
COL1A1-213ENST00000511732 CTNND1O60716 968 aaKnown RBP18.77■□□□□ 0.6
COL1A1-213ENST00000511732 CTGFP29279 349 aa18.77■□□□□ 0.6
COL1A1-213ENST00000511732 LACTBP83111 547 aaPredicted RBP18.77■□□□□ 0.6
COL1A1-213ENST00000511732 NAA16Q6N069 864 aaPredicted RBP18.77■□□□□ 0.6
COL1A1-213ENST00000511732 TEX11Q8IYF3 940 aa18.77■□□□□ 0.6
COL1A1-213ENST00000511732 ARMC5Q96C12 935 aa18.77■□□□□ 0.6
COL1A1-213ENST00000511732 PIH1D3Q9NQM4 214 aaKnown RBP18.77■□□□□ 0.6
COL1A1-213ENST00000511732 PICK1Q9NRD5 415 aa18.77■□□□□ 0.6
COL1A1-213ENST00000511732 FOCADQ5VW36 1801 aa18.77■□□□□ 0.59
COL1A1-213ENST00000511732 ATAD5Q96QE3 1844 aa18.77■□□□□ 0.59
COL1A1-213ENST00000511732 CENPFP49454 3210 aa18.76■□□□□ 0.59
COL1A1-213ENST00000511732 RBBP6Q7Z6E9 1792 aaKnown RBP18.76■□□□□ 0.59
COL1A1-213ENST00000511732 A0A0G2JLL6 359 aaPredicted RBP18.76■□□□□ 0.59
COL1A1-213ENST00000511732 ECM2O94769 699 aaPredicted RBP18.76■□□□□ 0.59
COL1A1-213ENST00000511732 PPP4CP60510 307 aa18.76■□□□□ 0.59
COL1A1-213ENST00000511732 RRP1BQ14684 758 aaKnown RBP18.76■□□□□ 0.59
COL1A1-213ENST00000511732 PRRT2Q7Z6L0 340 aaPredicted RBP18.76■□□□□ 0.59
COL1A1-213ENST00000511732 NDUFB9Q9Y6M9 179 aa18.76■□□□□ 0.59
COL1A1-213ENST00000511732 CYP2C8P10632 490 aa18.75■□□□□ 0.59
COL1A1-213ENST00000511732 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.75■□□□□ 0.59
COL1A1-213ENST00000511732 COG6Q9Y2V7 657 aa18.75■□□□□ 0.59
COL1A1-213ENST00000511732 ARHGEF6Q15052 776 aa18.74■□□□□ 0.59
COL1A1-213ENST00000511732 BRCA2P51587 3418 aa18.73■□□□□ 0.59
COL1A1-213ENST00000511732 TRIM75PA6NK02 468 aa18.73■□□□□ 0.59
COL1A1-213ENST00000511732 BAG3O95817 575 aa18.73■□□□□ 0.59
COL1A1-213ENST00000511732 FASTKD5Q7L8L6 764 aaKnown RBP18.73■□□□□ 0.59
COL1A1-213ENST00000511732 AACSQ86V21 672 aa18.73■□□□□ 0.59
COL1A1-213ENST00000511732 SIRT2Q8IXJ6 389 aa18.73■□□□□ 0.59
COL1A1-213ENST00000511732 TGFBRAP1Q8WUH2 860 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms