RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 BCL11AQ9H165 835 aa5.54□□□□□ -1.52
CHD1-207ENST00000511628 CSADQ9Y600 493 aa5.54□□□□□ -1.52
CHD1-207ENST00000511628 PRR19A6NJB7 356 aa5.53□□□□□ -1.52
CHD1-207ENST00000511628 WNT11O96014 354 aa5.53□□□□□ -1.52
CHD1-207ENST00000511628 FOSL1P15407 271 aa5.53□□□□□ -1.52
CHD1-207ENST00000511628 ADMP35318 185 aa5.53□□□□□ -1.52
CHD1-207ENST00000511628 COL19A1Q14993 1142 aa5.53□□□□□ -1.52
CHD1-207ENST00000511628 CCDC85BQ15834 202 aaPredicted RBP5.53□□□□□ -1.52
CHD1-207ENST00000511628 CCDC27Q2M243 656 aa5.53□□□□□ -1.52
CHD1-207ENST00000511628 PCNX4Q63HM2 1172 aa5.53□□□□□ -1.52
CHD1-207ENST00000511628 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.53□□□□□ -1.52
CHD1-207ENST00000511628 PCOLCE2Q9UKZ9 415 aa5.53□□□□□ -1.52
CHD1-207ENST00000511628 PCDHA4Q9UN74 947 aa5.53□□□□□ -1.52
CHD1-207ENST00000511628 ENC1O14682 589 aa5.52□□□□□ -1.53
CHD1-207ENST00000511628 PAGE1O75459 146 aa5.52□□□□□ -1.53
CHD1-207ENST00000511628 TRIM37O94972 964 aa5.52□□□□□ -1.53
CHD1-207ENST00000511628 MED26O95402 600 aa5.52□□□□□ -1.53
CHD1-207ENST00000511628 ITGAEP38570 1179 aa5.52□□□□□ -1.53
CHD1-207ENST00000511628 CDK5R2Q13319 367 aa5.52□□□□□ -1.53
CHD1-207ENST00000511628 SV2BQ7L1I2 683 aa5.52□□□□□ -1.53
CHD1-207ENST00000511628 ZNF765Q7L2R6 523 aa5.52□□□□□ -1.53
CHD1-207ENST00000511628 PDZD3Q86UT5 571 aa5.52□□□□□ -1.53
CHD1-207ENST00000511628 MRS2Q9HD23 443 aa5.52□□□□□ -1.53
CHD1-207ENST00000511628 DISC1Q9NRI5 854 aa5.52□□□□□ -1.53
CHD1-207ENST00000511628 CYP8B1Q9UNU6 501 aa5.52□□□□□ -1.53
CHD1-207ENST00000511628 AK5Q9Y6K8 562 aa5.52□□□□□ -1.53
CHD1-207ENST00000511628 KIAA1324LA8MWY0 1029 aaPredicted RBP5.51□□□□□ -1.53
CHD1-207ENST00000511628 DCDC2CA8MYV0 355 aa5.51□□□□□ -1.53
CHD1-207ENST00000511628 DYNC1LI2O43237 492 aaPredicted RBP5.51□□□□□ -1.53
CHD1-207ENST00000511628 CELA3AP09093 270 aa5.51□□□□□ -1.53
CHD1-207ENST00000511628 FAM87AP0C7U9 286 aa5.51□□□□□ -1.53
CHD1-207ENST00000511628 HOXA10P31260 410 aaPredicted RBP5.51□□□□□ -1.53
CHD1-207ENST00000511628 ERVK-24P63145 666 aa5.51□□□□□ -1.53
CHD1-207ENST00000511628 OGFOD3Q6PK18 319 aa5.51□□□□□ -1.53
CHD1-207ENST00000511628 GRIN3AQ8TCU5 1115 aa5.51□□□□□ -1.53
CHD1-207ENST00000511628 ZNF428Q96B54 188 aa5.51□□□□□ -1.53
CHD1-207ENST00000511628 GSX1Q9H4S2 264 aaPredicted RBP5.51□□□□□ -1.53
CHD1-207ENST00000511628 BMP6P22004 513 aa5.5□□□□□ -1.53
CHD1-207ENST00000511628 IRAK1P51617 712 aa5.5□□□□□ -1.53
CHD1-207ENST00000511628 GP2P55259 537 aaKnown RBP5.5□□□□□ -1.53
CHD1-207ENST00000511628 ZNF252P-AS1Q0IIN9 211 aa5.5□□□□□ -1.53
CHD1-207ENST00000511628 MAP3K11Q16584 847 aa5.5□□□□□ -1.53
CHD1-207ENST00000511628 ZC3H12AQ5D1E8 599 aaKnown RBP5.5□□□□□ -1.53
CHD1-207ENST00000511628 PPM1JQ5JR12 505 aa5.5□□□□□ -1.53
CHD1-207ENST00000511628 TTBK2Q6IQ55 1244 aa5.5□□□□□ -1.53
CHD1-207ENST00000511628 HDXQ7Z353 690 aa5.5□□□□□ -1.53
CHD1-207ENST00000511628 C12orf40Q86WS4 652 aa5.5□□□□□ -1.53
CHD1-207ENST00000511628 SHISA5Q8N114 240 aa5.5□□□□□ -1.53
CHD1-207ENST00000511628 RNF214Q8ND24 703 aa5.5□□□□□ -1.53
CHD1-207ENST00000511628 PARP2Q9UGN5 583 aa5.5□□□□□ -1.53
CHD1-207ENST00000511628 PRAMEF27A3QJZ7 478 aa5.49□□□□□ -1.53
CHD1-207ENST00000511628 ERCC3P19447 782 aa5.49□□□□□ -1.53
CHD1-207ENST00000511628 MPRIPQ6WCQ1 1025 aa5.49□□□□□ -1.53
CHD1-207ENST00000511628 NPM2Q86SE8 214 aaKnown RBP5.49□□□□□ -1.53
CHD1-207ENST00000511628 DTX1Q86Y01 620 aa5.49□□□□□ -1.53
CHD1-207ENST00000511628 TP53INP2Q8IXH6 220 aa5.49□□□□□ -1.53
CHD1-207ENST00000511628 ISL2Q96A47 359 aa5.49□□□□□ -1.53
CHD1-207ENST00000511628 C1GALT1Q9NS00 363 aa5.49□□□□□ -1.53
CHD1-207ENST00000511628 BSDC1Q9NW68 430 aaPredicted RBP5.49□□□□□ -1.53
CHD1-207ENST00000511628 VTI1BQ9UEU0 232 aa5.49□□□□□ -1.53
CHD1-207ENST00000511628 SPINK2P20155 84 aa5.48□□□□□ -1.53
CHD1-207ENST00000511628 ETF1P62495 437 aaKnown RBP5.48□□□□□ -1.53
CHD1-207ENST00000511628 SCARA3Q6AZY7 606 aa5.48□□□□□ -1.53
CHD1-207ENST00000511628 DNAJC14Q6Y2X3 702 aaPredicted RBP5.48□□□□□ -1.53
CHD1-207ENST00000511628 VSIG10LQ86VR7 867 aa5.48□□□□□ -1.53
CHD1-207ENST00000511628 NPAS4Q8IUM7 802 aa5.48□□□□□ -1.53
CHD1-207ENST00000511628 TOP6BLQ8N6T0 577 aa5.48□□□□□ -1.53
CHD1-207ENST00000511628 KCT2Q8NC54 265 aa5.48□□□□□ -1.53
CHD1-207ENST00000511628 FLCNQ8NFG4 579 aa5.48□□□□□ -1.53
CHD1-207ENST00000511628 ANKRD24Q8TF21 1146 aa5.48□□□□□ -1.53
CHD1-207ENST00000511628 PCDHGC5Q9Y5F6 944 aa5.48□□□□□ -1.53
CHD1-207ENST00000511628 FANCGO15287 622 aa5.47□□□□□ -1.53
CHD1-207ENST00000511628 SORBS3O60504 671 aa5.47□□□□□ -1.53
CHD1-207ENST00000511628 NEFMP07197 916 aa5.47□□□□□ -1.53
CHD1-207ENST00000511628 RLBP1P12271 317 aa5.47□□□□□ -1.53
CHD1-207ENST00000511628 ZNF507Q8TCN5 953 aa5.47□□□□□ -1.53
CHD1-207ENST00000511628 GATA6Q92908 595 aa5.47□□□□□ -1.53
CHD1-207ENST00000511628 FBXL18Q96ME1 805 aa5.47□□□□□ -1.53
CHD1-207ENST00000511628 TAF1CQ15572 869 aaPredicted RBP5.46□□□□□ -1.54
CHD1-207ENST00000511628 WIPI1Q5MNZ9 446 aaPredicted RBP5.46□□□□□ -1.54
CHD1-207ENST00000511628 SEZ6L2Q6UXD5 910 aa5.46□□□□□ -1.54
CHD1-207ENST00000511628 FAM181AQ8N9Y4 354 aa5.46□□□□□ -1.54
CHD1-207ENST00000511628 FAM161BQ96MY7 647 aa5.46□□□□□ -1.54
CHD1-207ENST00000511628 MIR1-1HGQ9H1L0 117 aa5.46□□□□□ -1.54
CHD1-207ENST00000511628 RNF19AQ9NV58 838 aa5.46□□□□□ -1.54
CHD1-207ENST00000511628 CCDC39Q9UFE4 941 aa5.46□□□□□ -1.54
CHD1-207ENST00000511628 ZC3H7BQ9UGR2 993 aaKnown RBP5.46□□□□□ -1.54
CHD1-207ENST00000511628 GTF2IRD1Q9UHL9 959 aa5.46□□□□□ -1.54
CHD1-207ENST00000511628 OAS3Q9Y6K5 1087 aaKnown RBP5.46□□□□□ -1.54
CHD1-207ENST00000511628 LEFTY1O75610 366 aa5.45□□□□□ -1.54
CHD1-207ENST00000511628 ITIH2P19823 946 aa5.45□□□□□ -1.54
CHD1-207ENST00000511628 RPS26P62854 115 aaKnown RBP5.45□□□□□ -1.54
CHD1-207ENST00000511628 DAB2P98082 770 aa5.45□□□□□ -1.54
CHD1-207ENST00000511628 SEPT6Q14141 434 aa5.45□□□□□ -1.54
CHD1-207ENST00000511628 MSMPQ1L6U9 139 aa5.45□□□□□ -1.54
CHD1-207ENST00000511628 ZNF326Q5BKZ1 582 aaKnown RBP5.45□□□□□ -1.54
CHD1-207ENST00000511628 ZBTB37Q5TC79 503 aa5.45□□□□□ -1.54
CHD1-207ENST00000511628 MEI1Q5TIA1 1274 aa5.45□□□□□ -1.54
CHD1-207ENST00000511628 RASIP1Q5U651 963 aa5.45□□□□□ -1.54
CHD1-207ENST00000511628 STK11IPQ8N1F8 1099 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms