RNA–Protein interactions for RNA: ENST00000511452.1

NFXL1-208, Transcript of nuclear transcription factor, X-box binding like 1, human

TSL 5

Gene NFXL1, Length 419 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFXL1-208	ENST00000511452	VAMP1	P23763	118 aa		6.12	□□□□□ -1.43
NFXL1-208	ENST00000511452	RBM25	P49756	843 aa	Known RBP	6.12	□□□□□ -1.43
NFXL1-208	ENST00000511452	TAF1C	Q15572	869 aa	Predicted RBP	6.12	□□□□□ -1.43
NFXL1-208	ENST00000511452	CARMIL2	Q6F5E8	1435 aa		6.12	□□□□□ -1.43
NFXL1-208	ENST00000511452	KIAA1211	Q6ZU35	1233 aa		6.12	□□□□□ -1.43
NFXL1-208	ENST00000511452	USP31	Q70CQ4	1352 aa		6.12	□□□□□ -1.43
NFXL1-208	ENST00000511452	GIMAP7	Q8NHV1	300 aa		6.12	□□□□□ -1.43
NFXL1-208	ENST00000511452	ZFYVE1	Q9HBF4	777 aa		6.12	□□□□□ -1.43
NFXL1-208	ENST00000511452	LOC100289279	A0A1B0GTE1	492 aa		6.11	□□□□□ -1.43
NFXL1-208	ENST00000511452	BMP3	P12645	472 aa		6.11	□□□□□ -1.43
NFXL1-208	ENST00000511452	MAOB	P27338	520 aa		6.11	□□□□□ -1.43
NFXL1-208	ENST00000511452	ARL4D	P49703	201 aa		6.11	□□□□□ -1.43
NFXL1-208	ENST00000511452	ST13	P50502	369 aa	Known RBP	6.11	□□□□□ -1.43
NFXL1-208	ENST00000511452	TSNAXIP1	Q2TAA8	658 aa		6.11	□□□□□ -1.43
NFXL1-208	ENST00000511452	PDZD3	Q86UT5	571 aa		6.11	□□□□□ -1.43
NFXL1-208	ENST00000511452	SULF2	Q8IWU5	870 aa		6.11	□□□□□ -1.43
NFXL1-208	ENST00000511452	USP26	Q9BXU7	913 aa		6.11	□□□□□ -1.43
NFXL1-208	ENST00000511452	BIN1	O00499	593 aa		6.1	□□□□□ -1.43
NFXL1-208	ENST00000511452	PSPN	O60542	156 aa		6.1	□□□□□ -1.43
NFXL1-208	ENST00000511452	BMP6	P22004	513 aa		6.1	□□□□□ -1.43
NFXL1-208	ENST00000511452	CCDC85B	Q15834	202 aa	Predicted RBP	6.1	□□□□□ -1.43
NFXL1-208	ENST00000511452	MPRIP	Q6WCQ1	1025 aa		6.1	□□□□□ -1.43
NFXL1-208	ENST00000511452	GRIN3A	Q8TCU5	1115 aa		6.1	□□□□□ -1.43
NFXL1-208	ENST00000511452	OSBPL1A	Q9BXW6	950 aa		6.1	□□□□□ -1.43
NFXL1-208	ENST00000511452	ZC3H12C	Q9C0D7	883 aa	Known RBP	6.1	□□□□□ -1.43
NFXL1-208	ENST00000511452	CEP44	Q9C0F1	390 aa		6.1	□□□□□ -1.43
NFXL1-208	ENST00000511452		F6X3S4	739 aa		6.09	□□□□□ -1.43
NFXL1-208	ENST00000511452	SART1	O43290	800 aa	Known RBP	6.09	□□□□□ -1.43
NFXL1-208	ENST00000511452	NME2	P22392	152 aa		6.09	□□□□□ -1.43
NFXL1-208	ENST00000511452	PPP2R3A	Q06190	1150 aa		6.09	□□□□□ -1.43
NFXL1-208	ENST00000511452	POU4F3	Q15319	338 aa		6.09	□□□□□ -1.43
NFXL1-208	ENST00000511452	DUOXA2	Q1HG44	320 aa		6.09	□□□□□ -1.43
NFXL1-208	ENST00000511452	SV2B	Q7L1I2	683 aa		6.09	□□□□□ -1.43
NFXL1-208	ENST00000511452	FBXL6	Q8N531	539 aa		6.09	□□□□□ -1.43
NFXL1-208	ENST00000511452	PAK6	Q9NQU5	681 aa	Predicted RBP	6.09	□□□□□ -1.43
NFXL1-208	ENST00000511452	CYP11A1	P05108	521 aa		6.08	□□□□□ -1.44
NFXL1-208	ENST00000511452	GSTP1	P09211	210 aa	Known RBP	6.08	□□□□□ -1.44
NFXL1-208	ENST00000511452	ARNT	P27540	789 aa		6.08	□□□□□ -1.44
NFXL1-208	ENST00000511452	FANCC	Q00597	558 aa		6.08	□□□□□ -1.44
NFXL1-208	ENST00000511452	ZNF252P-AS1	Q0IIN9	211 aa		6.08	□□□□□ -1.44
NFXL1-208	ENST00000511452	AP3B2	Q13367	1082 aa		6.08	□□□□□ -1.44
NFXL1-208	ENST00000511452	MAP3K11	Q16584	847 aa		6.08	□□□□□ -1.44
NFXL1-208	ENST00000511452	PCNX4	Q63HM2	1172 aa		6.08	□□□□□ -1.44
NFXL1-208	ENST00000511452	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	6.08	□□□□□ -1.44
NFXL1-208	ENST00000511452	TMEM87A	Q8NBN3	555 aa		6.08	□□□□□ -1.44
NFXL1-208	ENST00000511452	WDR89	Q96FK6	387 aa	Predicted RBP	6.08	□□□□□ -1.44
NFXL1-208	ENST00000511452	NOC4L	Q9BVI4	516 aa	Known RBP	6.08	□□□□□ -1.44
NFXL1-208	ENST00000511452	CCDC86	Q9H6F5	360 aa	Known RBP	6.08	□□□□□ -1.44
NFXL1-208	ENST00000511452	BSDC1	Q9NW68	430 aa	Predicted RBP	6.08	□□□□□ -1.44
NFXL1-208	ENST00000511452	F13B	P05160	661 aa		6.07	□□□□□ -1.44
NFXL1-208	ENST00000511452	LIG3	P49916	1009 aa		6.07	□□□□□ -1.44
NFXL1-208	ENST00000511452	TTBK2	Q6IQ55	1244 aa		6.07	□□□□□ -1.44
NFXL1-208	ENST00000511452	TOX2	Q96NM4	488 aa		6.07	□□□□□ -1.44
NFXL1-208	ENST00000511452	CORO1B	Q9BR76	489 aa		6.07	□□□□□ -1.44
NFXL1-208	ENST00000511452	RUSC1	Q9BVN2	902 aa		6.07	□□□□□ -1.44
NFXL1-208	ENST00000511452	TMPRSS13	Q9BYE2	586 aa		6.07	□□□□□ -1.44
NFXL1-208	ENST00000511452	COPRS	Q9NQ92	184 aa		6.07	□□□□□ -1.44
NFXL1-208	ENST00000511452	ZNF862	O60290	1169 aa		6.06	□□□□□ -1.44
NFXL1-208	ENST00000511452	ITGAE	P38570	1179 aa		6.06	□□□□□ -1.44
NFXL1-208	ENST00000511452	KRTAP1-1	Q07627	177 aa		6.06	□□□□□ -1.44
NFXL1-208	ENST00000511452	MAP1S	Q66K74	1059 aa	Predicted RBP	6.06	□□□□□ -1.44
NFXL1-208	ENST00000511452	LCNL1	Q6ZST4	164 aa		6.06	□□□□□ -1.44
NFXL1-208	ENST00000511452	ERMP1	Q7Z2K6	904 aa		6.06	□□□□□ -1.44
NFXL1-208	ENST00000511452	DDX54	Q8TDD1	881 aa	Known RBP	6.06	□□□□□ -1.44
NFXL1-208	ENST00000511452	CBX8	Q9HC52	389 aa		6.06	□□□□□ -1.44
NFXL1-208	ENST00000511452	CACNA2D2	Q9NY47	1150 aa		6.06	□□□□□ -1.44
NFXL1-208	ENST00000511452	TLR6	Q9Y2C9	796 aa		6.06	□□□□□ -1.44
NFXL1-208	ENST00000511452	PCDHB5	Q9Y5E4	795 aa		6.06	□□□□□ -1.44
NFXL1-208	ENST00000511452	LIG1	P18858	919 aa		6.05	□□□□□ -1.44
NFXL1-208	ENST00000511452	PREP	P48147	710 aa		6.05	□□□□□ -1.44
NFXL1-208	ENST00000511452	PTPN11	Q06124	597 aa	Predicted RBP	6.05	□□□□□ -1.44
NFXL1-208	ENST00000511452	CPSF6	Q16630	551 aa	Known RBP eCLIP	6.05	□□□□□ -1.44
NFXL1-208	ENST00000511452	CILP2	Q8IUL8	1156 aa		6.05	□□□□□ -1.44
NFXL1-208	ENST00000511452	PHC3	Q8NDX5	983 aa		6.05	□□□□□ -1.44
NFXL1-208	ENST00000511452	FAM168A	Q92567	244 aa		6.05	□□□□□ -1.44
NFXL1-208	ENST00000511452	KCNB2	Q92953	911 aa		6.05	□□□□□ -1.44
NFXL1-208	ENST00000511452	GAL3ST3	Q96A11	431 aa		6.05	□□□□□ -1.44
NFXL1-208	ENST00000511452	WDR18	Q9BV38	432 aa		6.05	□□□□□ -1.44
NFXL1-208	ENST00000511452	RNF208	Q9H0X6	261 aa		6.05	□□□□□ -1.44
NFXL1-208	ENST00000511452	BCL11A	Q9H165	835 aa		6.05	□□□□□ -1.44
NFXL1-208	ENST00000511452	KBTBD4	Q9NVX7	518 aa		6.05	□□□□□ -1.44
NFXL1-208	ENST00000511452	LMCD1	Q9NZU5	365 aa		6.05	□□□□□ -1.44
NFXL1-208	ENST00000511452	MEGF11	A6BM72	1044 aa		6.04	□□□□□ -1.44
NFXL1-208	ENST00000511452	TFE3	P19532	575 aa	Predicted RBP	6.04	□□□□□ -1.44
NFXL1-208	ENST00000511452	CFP	P27918	469 aa		6.04	□□□□□ -1.44
NFXL1-208	ENST00000511452	ZNF76	P36508	570 aa		6.04	□□□□□ -1.44
NFXL1-208	ENST00000511452	HDLBP	Q00341	1268 aa	Known RBP	6.04	□□□□□ -1.44
NFXL1-208	ENST00000511452	PDE3A	Q14432	1141 aa		6.04	□□□□□ -1.44
NFXL1-208	ENST00000511452	EXOSC6	Q5RKV6	272 aa	Known RBP	6.04	□□□□□ -1.44
NFXL1-208	ENST00000511452	LLGL2	Q6P1M3	1020 aa		6.04	□□□□□ -1.44
NFXL1-208	ENST00000511452	AGMO	Q6ZNB7	445 aa		6.04	□□□□□ -1.44
NFXL1-208	ENST00000511452	TTLL10	Q6ZVT0	673 aa		6.04	□□□□□ -1.44
NFXL1-208	ENST00000511452	METTL16	Q86W50	562 aa	Known RBP	6.04	□□□□□ -1.44
NFXL1-208	ENST00000511452	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	6.04	□□□□□ -1.44
NFXL1-208	ENST00000511452	GPBAR1	Q8TDU6	330 aa		6.04	□□□□□ -1.44
NFXL1-208	ENST00000511452	HIF3A	Q9Y2N7	669 aa		6.04	□□□□□ -1.44
NFXL1-208	ENST00000511452	PCDHGC5	Q9Y5F6	944 aa		6.04	□□□□□ -1.44
NFXL1-208	ENST00000511452	SCAMP3	O14828	347 aa	Known RBP	6.03	□□□□□ -1.44
NFXL1-208	ENST00000511452	CYP26A1	O43174	497 aa		6.03	□□□□□ -1.44
NFXL1-208	ENST00000511452	EIF4EBP3	O60516	100 aa	Predicted RBP	6.03	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms