RNA–Protein interactions for RNA: ENST00000511129.2

SCARB2-205, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-205ENST00000511129 SCARA3Q6AZY7 606 aa6.99□□□□□ -1.29
SCARB2-205ENST00000511129 PDZD3Q86UT5 571 aa6.99□□□□□ -1.29
SCARB2-205ENST00000511129 NT5DC4Q86YG4 428 aa6.99□□□□□ -1.29
SCARB2-205ENST00000511129 TMEM130Q8N3G9 435 aa6.99□□□□□ -1.29
SCARB2-205ENST00000511129 PHC3Q8NDX5 983 aa6.99□□□□□ -1.29
SCARB2-205ENST00000511129 GRIN3AQ8TCU5 1115 aa6.99□□□□□ -1.29
SCARB2-205ENST00000511129 NRSN2Q9GZP1 204 aa6.99□□□□□ -1.29
SCARB2-205ENST00000511129 MIR1-1HGQ9H1L0 117 aa6.99□□□□□ -1.29
SCARB2-205ENST00000511129 AKTIPQ9H8T0 292 aa6.99□□□□□ -1.29
SCARB2-205ENST00000511129 CYP4F12Q9HCS2 524 aa6.99□□□□□ -1.29
SCARB2-205ENST00000511129 COPRSQ9NQ92 184 aa6.99□□□□□ -1.29
SCARB2-205ENST00000511129 TLR6Q9Y2C9 796 aa6.99□□□□□ -1.29
SCARB2-205ENST00000511129 ABCC8Q09428 1581 aa6.99□□□□□ -1.29
SCARB2-205ENST00000511129 MEGF11A6BM72 1044 aa6.98□□□□□ -1.29
SCARB2-205ENST00000511129 TRIM37O94972 964 aa6.98□□□□□ -1.29
SCARB2-205ENST00000511129 WISP1O95388 367 aa6.98□□□□□ -1.29
SCARB2-205ENST00000511129 ECEL1O95672 775 aa6.98□□□□□ -1.29
SCARB2-205ENST00000511129 ERCC5P28715 1186 aaPredicted RBP6.98□□□□□ -1.29
SCARB2-205ENST00000511129 ZNF252P-AS1Q0IIN9 211 aa6.98□□□□□ -1.29
SCARB2-205ENST00000511129 RSPO4Q2I0M5 234 aaPredicted RBP6.98□□□□□ -1.29
SCARB2-205ENST00000511129 KIAA1211Q6ZU35 1233 aa6.98□□□□□ -1.29
SCARB2-205ENST00000511129 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.98□□□□□ -1.29
SCARB2-205ENST00000511129 ZNF654Q8IZM8 581 aa6.98□□□□□ -1.29
SCARB2-205ENST00000511129 CCDC86Q9H6F5 360 aaKnown RBP6.98□□□□□ -1.29
SCARB2-205ENST00000511129 RAD54L2Q9Y4B4 1467 aa6.98□□□□□ -1.29
SCARB2-205ENST00000511129 TOP2BQ02880 1626 aa6.98□□□□□ -1.29
SCARB2-205ENST00000511129 F8W735 103 aaPredicted RBP6.97□□□□□ -1.29
SCARB2-205ENST00000511129 LIG1P18858 919 aa6.97□□□□□ -1.29
SCARB2-205ENST00000511129 LMNB2Q03252 620 aa6.97□□□□□ -1.29
SCARB2-205ENST00000511129 CAMK2GQ13555 558 aaPredicted RBP6.97□□□□□ -1.29
SCARB2-205ENST00000511129 FDX2Q6P4F2 183 aa6.97□□□□□ -1.29
SCARB2-205ENST00000511129 METTL16Q86W50 562 aaKnown RBP6.97□□□□□ -1.29
SCARB2-205ENST00000511129 JARID2Q92833 1246 aaPredicted RBP6.97□□□□□ -1.29
SCARB2-205ENST00000511129 SPATA32Q96LK8 384 aa6.97□□□□□ -1.29
SCARB2-205ENST00000511129 SART1O43290 800 aaKnown RBP6.96□□□□□ -1.3
SCARB2-205ENST00000511129 AOC2O75106 756 aa6.96□□□□□ -1.3
SCARB2-205ENST00000511129 ALX3O95076 343 aa6.96□□□□□ -1.3
SCARB2-205ENST00000511129 PF4P02776 101 aa6.96□□□□□ -1.3
SCARB2-205ENST00000511129 CTSBP07858 339 aa6.96□□□□□ -1.3
SCARB2-205ENST00000511129 GLB1P16278 677 aa6.96□□□□□ -1.3
SCARB2-205ENST00000511129 NCLP19338 710 aaKnown RBP6.96□□□□□ -1.3
SCARB2-205ENST00000511129 TFE3P19532 575 aaPredicted RBP6.96□□□□□ -1.3
SCARB2-205ENST00000511129 EIF4A3P38919 411 aaKnown RBP6.96□□□□□ -1.3
SCARB2-205ENST00000511129 IREB2P48200 963 aaKnown RBP6.96□□□□□ -1.3
SCARB2-205ENST00000511129 ZNF394Q53GI3 561 aa6.96□□□□□ -1.3
SCARB2-205ENST00000511129 AKAP4Q5JQC9 854 aa6.96□□□□□ -1.3
SCARB2-205ENST00000511129 NKAPLQ5M9Q1 402 aa6.96□□□□□ -1.3
SCARB2-205ENST00000511129 SNAP47Q5SQN1 464 aa6.96□□□□□ -1.3
SCARB2-205ENST00000511129 RASIP1Q5U651 963 aa6.96□□□□□ -1.3
SCARB2-205ENST00000511129 CCDC84Q86UT8 332 aaPredicted RBP6.96□□□□□ -1.3
SCARB2-205ENST00000511129 ANKRD13AQ8IZ07 590 aa6.96□□□□□ -1.3
SCARB2-205ENST00000511129 AGGF1Q8N302 714 aaeCLIP6.96□□□□□ -1.3
SCARB2-205ENST00000511129 C12orf50Q8NA57 414 aaPredicted RBP6.96□□□□□ -1.3
SCARB2-205ENST00000511129 GPBAR1Q8TDU6 330 aa6.96□□□□□ -1.3
SCARB2-205ENST00000511129 WFDC12Q8WWY7 111 aa6.96□□□□□ -1.3
SCARB2-205ENST00000511129 TMPRSS13Q9BYE2 586 aa6.96□□□□□ -1.3
SCARB2-205ENST00000511129 KRTAP4-8Q9BYQ9 185 aa6.96□□□□□ -1.3
SCARB2-205ENST00000511129 CEP41Q9BYV8 373 aa6.96□□□□□ -1.3
SCARB2-205ENST00000511129 TPSG1Q9NRR2 321 aa6.96□□□□□ -1.3
SCARB2-205ENST00000511129 DDX41Q9UJV9 622 aaKnown RBP6.96□□□□□ -1.3
SCARB2-205ENST00000511129 PCDHA4Q9UN74 947 aa6.96□□□□□ -1.3
SCARB2-205ENST00000511129 PCDHB5Q9Y5E4 795 aa6.96□□□□□ -1.3
SCARB2-205ENST00000511129 DLGAP3O95886 979 aa6.95□□□□□ -1.3
SCARB2-205ENST00000511129 FAM160A1Q05DH4 1040 aa6.95□□□□□ -1.3
SCARB2-205ENST00000511129 SEPT6Q14141 434 aa6.95□□□□□ -1.3
SCARB2-205ENST00000511129 MBTPS1Q14703 1052 aa6.95□□□□□ -1.3
SCARB2-205ENST00000511129 ZMYM1Q5SVZ6 1142 aa6.95□□□□□ -1.3
SCARB2-205ENST00000511129 ANKRD34AQ69YU3 496 aa6.95□□□□□ -1.3
SCARB2-205ENST00000511129 TRIM42Q8IWZ5 723 aa6.95□□□□□ -1.3
SCARB2-205ENST00000511129 GOLM1Q8NBJ4 401 aa6.95□□□□□ -1.3
SCARB2-205ENST00000511129 TGIF2Q9GZN2 237 aa6.95□□□□□ -1.3
SCARB2-205ENST00000511129 CCSER2Q9H7U1 834 aa6.95□□□□□ -1.3
SCARB2-205ENST00000511129 SUGCTQ9HAC7 445 aa6.95□□□□□ -1.3
SCARB2-205ENST00000511129 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.95□□□□□ -1.3
SCARB2-205ENST00000511129 SUPT16HQ9Y5B9 1047 aaKnown RBP6.95□□□□□ -1.3
SCARB2-205ENST00000511129 PCDHGB7Q9Y5F8 929 aa6.95□□□□□ -1.3
SCARB2-205ENST00000511129 ARID4BQ4LE39 1312 aaPredicted RBP6.95□□□□□ -1.3
SCARB2-205ENST00000511129 ZNF862O60290 1169 aa6.94□□□□□ -1.3
SCARB2-205ENST00000511129 BPNT1O95861 308 aa6.94□□□□□ -1.3
SCARB2-205ENST00000511129 ADGRE1Q14246 886 aa6.94□□□□□ -1.3
SCARB2-205ENST00000511129 KIF4BQ2VIQ3 1234 aa6.94□□□□□ -1.3
SCARB2-205ENST00000511129 MPRIPQ6WCQ1 1025 aa6.94□□□□□ -1.3
SCARB2-205ENST00000511129 TXNRD3Q86VQ6 643 aa6.94□□□□□ -1.3
SCARB2-205ENST00000511129 SMG8Q8ND04 991 aaKnown RBP6.94□□□□□ -1.3
SCARB2-205ENST00000511129 ZNF296Q8WUU4 475 aaPredicted RBP6.94□□□□□ -1.3
SCARB2-205ENST00000511129 RHOVQ96L33 236 aa6.94□□□□□ -1.3
SCARB2-205ENST00000511129 SPON2Q9BUD6 331 aa6.94□□□□□ -1.3
SCARB2-205ENST00000511129 WDR18Q9BV38 432 aa6.94□□□□□ -1.3
SCARB2-205ENST00000511129 SYNGAP1Q96PV0 1343 aa6.94□□□□□ -1.3
SCARB2-205ENST00000511129 GAS2O43903 313 aaKnown RBP6.93□□□□□ -1.3
SCARB2-205ENST00000511129 NOS3P29474 1203 aa6.93□□□□□ -1.3
SCARB2-205ENST00000511129 SOX4Q06945 474 aaPredicted RBP6.93□□□□□ -1.3
SCARB2-205ENST00000511129 HDXQ7Z353 690 aa6.93□□□□□ -1.3
SCARB2-205ENST00000511129 KIAA0825Q8IV33 1275 aa6.93□□□□□ -1.3
SCARB2-205ENST00000511129 ELMO3Q96BJ8 720 aa6.93□□□□□ -1.3
SCARB2-205ENST00000511129 WDR89Q96FK6 387 aaPredicted RBP6.93□□□□□ -1.3
SCARB2-205ENST00000511129 PICK1Q9NRD5 415 aa6.93□□□□□ -1.3
SCARB2-205ENST00000511129 AP4E1Q9UPM8 1137 aa6.93□□□□□ -1.3
SCARB2-205ENST00000511129 AQRO60306 1485 aaKnown RBP eCLIP6.92□□□□□ -1.3
SCARB2-205ENST00000511129 ABCA10Q8WWZ4 1543 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms