RNA–Protein interactions for RNA: ENST00000509712.5

CCDC30-213, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-213ENST00000509712 LIG3P49916 1009 aa6.12□□□□□ -1.43
CCDC30-213ENST00000509712 ZNF157P51786 506 aaPredicted RBP6.12□□□□□ -1.43
CCDC30-213ENST00000509712 ZNF252P-AS1Q0IIN9 211 aa6.12□□□□□ -1.43
CCDC30-213ENST00000509712 PCNX4Q63HM2 1172 aa6.12□□□□□ -1.43
CCDC30-213ENST00000509712 DMRTC2Q8IXT2 367 aaPredicted RBP6.12□□□□□ -1.43
CCDC30-213ENST00000509712 DTWD1Q8N5C7 304 aa6.12□□□□□ -1.43
CCDC30-213ENST00000509712 NGEFQ8N5V2 710 aa6.12□□□□□ -1.43
CCDC30-213ENST00000509712 MSL3Q8N5Y2 521 aaKnown RBP6.12□□□□□ -1.43
CCDC30-213ENST00000509712 MYCBPQ99417 103 aaPredicted RBP6.12□□□□□ -1.43
CCDC30-213ENST00000509712 PAIP2Q9BPZ3 127 aaKnown RBP6.12□□□□□ -1.43
CCDC30-213ENST00000509712 KRTAP9-9Q9BYP9 154 aa6.12□□□□□ -1.43
CCDC30-213ENST00000509712 KRTAP9-4Q9BYQ2 154 aa6.12□□□□□ -1.43
CCDC30-213ENST00000509712 TGIF2Q9GZN2 237 aa6.12□□□□□ -1.43
CCDC30-213ENST00000509712 KCNQ5Q9NR82 932 aa6.12□□□□□ -1.43
CCDC30-213ENST00000509712 KBTBD4Q9NVX7 518 aa6.12□□□□□ -1.43
CCDC30-213ENST00000509712 CACNA2D2Q9NY47 1150 aa6.12□□□□□ -1.43
CCDC30-213ENST00000509712 GGT7Q9UJ14 662 aa6.12□□□□□ -1.43
CCDC30-213ENST00000509712 RIPOR2Q9Y4F9 1068 aa6.12□□□□□ -1.43
CCDC30-213ENST00000509712 PCDHGB7Q9Y5F8 929 aa6.12□□□□□ -1.43
CCDC30-213ENST00000509712 ADAM11O75078 769 aa6.11□□□□□ -1.43
CCDC30-213ENST00000509712 NME2P22392 152 aa6.11□□□□□ -1.43
CCDC30-213ENST00000509712 ERCC5P28715 1186 aaPredicted RBP6.11□□□□□ -1.43
CCDC30-213ENST00000509712 CDC25BP30305 580 aa6.11□□□□□ -1.43
CCDC30-213ENST00000509712 RPS26P62854 115 aaKnown RBP6.11□□□□□ -1.43
CCDC30-213ENST00000509712 C19orf57Q0VDD7 668 aa6.11□□□□□ -1.43
CCDC30-213ENST00000509712 FOXD4L6Q3SYB3 417 aaPredicted RBP6.11□□□□□ -1.43
CCDC30-213ENST00000509712 FOXD4L3Q6VB84 417 aaPredicted RBP6.11□□□□□ -1.43
CCDC30-213ENST00000509712 AGMOQ6ZNB7 445 aa6.11□□□□□ -1.43
CCDC30-213ENST00000509712 MAP4K3Q8IVH8 894 aa6.11□□□□□ -1.43
CCDC30-213ENST00000509712 FMR1NBQ8N0W7 255 aaPredicted RBP6.11□□□□□ -1.43
CCDC30-213ENST00000509712 PHC3Q8NDX5 983 aa6.11□□□□□ -1.43
CCDC30-213ENST00000509712 DCAF11Q8TEB1 546 aa6.11□□□□□ -1.43
CCDC30-213ENST00000509712 ITFG2Q969R8 447 aa6.11□□□□□ -1.43
CCDC30-213ENST00000509712 KLHDC7BQ96G42 594 aa6.11□□□□□ -1.43
CCDC30-213ENST00000509712 SGSM3Q96HU1 749 aa6.11□□□□□ -1.43
CCDC30-213ENST00000509712 CFAP65Q6ZU64 1925 aaKnown RBP6.11□□□□□ -1.43
CCDC30-213ENST00000509712 EEA1Q15075 1411 aa6.11□□□□□ -1.43
CCDC30-213ENST00000509712 A0A0A0MRY4 1105 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 CCDC66A2RUB6 948 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 CCDC172P0C7W6 258 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 NEFHP12036 1026 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 GARTP22102 1010 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 PPP2R3AQ06190 1150 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 TTBK2Q6IQ55 1244 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 USP48Q86UV5 1035 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 SULF2Q8IWU5 870 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 KLHL23Q8NBE8 558 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 MNS1Q8NEH6 495 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 TMEM74Q96NL1 305 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 FAM177BA6PVY3 158 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 HMGB1P1B2RPK0 211 aaPredicted RBP6.1□□□□□ -1.43
CCDC30-213ENST00000509712 F6X3S4 739 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 PIK3R2O00459 728 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 DLL1O00548 723 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 ECEL1O95672 775 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 CTSBP07858 339 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 RLBP1P12271 317 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 TFE3P19532 575 aaPredicted RBP6.1□□□□□ -1.43
CCDC30-213ENST00000509712 FAM117BQ6P1L5 589 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 SLC7A3Q8WY07 619 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 GAL3ST3Q96A11 431 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 C8orf37Q96NL8 207 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 PLVAPQ9BX97 442 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 KCNK4Q9NYG8 393 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 ADAMTS1Q9UHI8 967 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 ISY1Q9ULR0 285 aaKnown RBP6.1□□□□□ -1.43
CCDC30-213ENST00000509712 TLR6Q9Y2C9 796 aa6.1□□□□□ -1.43
CCDC30-213ENST00000509712 CADPSQ9ULU8 1353 aa6.09□□□□□ -1.43
CCDC30-213ENST00000509712 DYNC1I1O14576 645 aa6.09□□□□□ -1.43
CCDC30-213ENST00000509712 COL8A1P27658 744 aa6.09□□□□□ -1.43
CCDC30-213ENST00000509712 AP3B2Q13367 1082 aa6.09□□□□□ -1.43
CCDC30-213ENST00000509712 PWP1Q13610 501 aa6.09□□□□□ -1.43
CCDC30-213ENST00000509712 NFKBIBQ15653 356 aa6.09□□□□□ -1.43
CCDC30-213ENST00000509712 MAP3K11Q16584 847 aa6.09□□□□□ -1.43
CCDC30-213ENST00000509712 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.09□□□□□ -1.43
CCDC30-213ENST00000509712 FBXO11Q86XK2 927 aa6.09□□□□□ -1.43
CCDC30-213ENST00000509712 NCAPGQ9BPX3 1015 aa6.09□□□□□ -1.43
CCDC30-213ENST00000509712 TINF2Q9BSI4 451 aa6.09□□□□□ -1.43
CCDC30-213ENST00000509712 MYH16Q9H6N6 1097 aa6.09□□□□□ -1.43
CCDC30-213ENST00000509712 BRMS1Q9HCU9 246 aa6.09□□□□□ -1.43
CCDC30-213ENST00000509712 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.09□□□□□ -1.43
CCDC30-213ENST00000509712 GSTP1P09211 210 aaKnown RBP6.08□□□□□ -1.44
CCDC30-213ENST00000509712 SELPP16109 830 aa6.08□□□□□ -1.44
CCDC30-213ENST00000509712 ARNTP27540 789 aa6.08□□□□□ -1.44
CCDC30-213ENST00000509712 GSTM4Q03013 218 aa6.08□□□□□ -1.44
CCDC30-213ENST00000509712 GRIN3AQ8TCU5 1115 aa6.08□□□□□ -1.44
CCDC30-213ENST00000509712 KRTAP4-12Q9BQ66 201 aa6.08□□□□□ -1.44
CCDC30-213ENST00000509712 ACBD3Q9H3P7 528 aa6.08□□□□□ -1.44
CCDC30-213ENST00000509712 SMC4Q9NTJ3 1288 aa6.08□□□□□ -1.44
CCDC30-213ENST00000509712 LOC100289279A0A1B0GTE1 492 aa6.07□□□□□ -1.44
CCDC30-213ENST00000509712 DLGAP3O95886 979 aa6.07□□□□□ -1.44
CCDC30-213ENST00000509712 GBP2P32456 591 aaPredicted RBP6.07□□□□□ -1.44
CCDC30-213ENST00000509712 CD68P34810 354 aaPredicted RBP6.07□□□□□ -1.44
CCDC30-213ENST00000509712 ZC3H6P61129 1189 aaKnown RBP6.07□□□□□ -1.44
CCDC30-213ENST00000509712 LMNB2Q03252 620 aa6.07□□□□□ -1.44
CCDC30-213ENST00000509712 TRAPPC3LQ5T215 181 aa6.07□□□□□ -1.44
CCDC30-213ENST00000509712 MPRIPQ6WCQ1 1025 aa6.07□□□□□ -1.44
CCDC30-213ENST00000509712 ARMCX6Q7L4S7 300 aa6.07□□□□□ -1.44
CCDC30-213ENST00000509712 TRIM42Q8IWZ5 723 aa6.07□□□□□ -1.44
CCDC30-213ENST00000509712 ZNF654Q8IZM8 581 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms