RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 KIF28PB7ZC32 967 aa17.38■□□□□ 0.37
PHF3-209ENST00000509330 COL23A1Q86Y22 540 aaPredicted RBP17.38■□□□□ 0.37
PHF3-209ENST00000509330 FBXL16Q8N461 479 aa17.38■□□□□ 0.37
PHF3-209ENST00000509330 TMEM87BQ96K49 555 aa17.38■□□□□ 0.37
PHF3-209ENST00000509330 UBAC1Q9BSL1 405 aa17.38■□□□□ 0.37
PHF3-209ENST00000509330 ALG1Q9BT22 464 aa17.38■□□□□ 0.37
PHF3-209ENST00000509330 ZSCAN16Q9H4T2 348 aaPredicted RBP17.38■□□□□ 0.37
PHF3-209ENST00000509330 hCG_1642624A0A1W2PR95 340 aa17.38■□□□□ 0.37
PHF3-209ENST00000509330 ERICH2A1L162 156 aa17.38■□□□□ 0.37
PHF3-209ENST00000509330 FAM47AQ5JRC9 791 aa17.38■□□□□ 0.37
PHF3-209ENST00000509330 CNNM2Q9H8M5 875 aa17.38■□□□□ 0.37
PHF3-209ENST00000509330 NMT2O60551 498 aa17.37■□□□□ 0.37
PHF3-209ENST00000509330 NR1I2O75469 434 aa17.37■□□□□ 0.37
PHF3-209ENST00000509330 RBM6P78332 1123 aaKnown RBP17.37■□□□□ 0.37
PHF3-209ENST00000509330 PLCB2Q00722 1185 aa17.37■□□□□ 0.37
PHF3-209ENST00000509330 CTR9Q6PD62 1173 aa17.37■□□□□ 0.37
PHF3-209ENST00000509330 MPNDQ8N594 471 aa17.37■□□□□ 0.37
PHF3-209ENST00000509330 ZNF219Q9P2Y4 722 aaPredicted RBP17.37■□□□□ 0.37
PHF3-209ENST00000509330 BAZ2AQ9UIF9 1905 aaKnown RBP17.37■□□□□ 0.37
PHF3-209ENST00000509330 CACNA1SQ13698 1873 aa17.37■□□□□ 0.37
PHF3-209ENST00000509330 TNKSO95271 1327 aa17.37■□□□□ 0.37
PHF3-209ENST00000509330 LDHBP07195 334 aaKnown RBP17.37■□□□□ 0.37
PHF3-209ENST00000509330 SYNE3Q6ZMZ3 975 aa17.37■□□□□ 0.37
PHF3-209ENST00000509330 TRIM44Q96DX7 344 aaPredicted RBP17.37■□□□□ 0.37
PHF3-209ENST00000509330 RBM17Q96I25 401 aaKnown RBP17.37■□□□□ 0.37
PHF3-209ENST00000509330 FAM217BQ9NTX9 383 aaPredicted RBP17.37■□□□□ 0.37
PHF3-209ENST00000509330 USP17L8P0C7I0 530 aa17.36■□□□□ 0.37
PHF3-209ENST00000509330 GUCY1A2P33402 732 aa17.36■□□□□ 0.37
PHF3-209ENST00000509330 MCM9Q9NXL9 1143 aa17.36■□□□□ 0.37
PHF3-209ENST00000509330 UBR3Q6ZT12 1888 aa17.36■□□□□ 0.37
PHF3-209ENST00000509330 MYH13Q9UKX3 1938 aa17.36■□□□□ 0.37
PHF3-209ENST00000509330 IARSP41252 1262 aaKnown RBP17.36■□□□□ 0.37
PHF3-209ENST00000509330 ME1P48163 572 aa17.36■□□□□ 0.37
PHF3-209ENST00000509330 SART3Q15020 963 aaKnown RBP17.36■□□□□ 0.37
PHF3-209ENST00000509330 FBXO18Q8NFZ0 1043 aa17.36■□□□□ 0.37
PHF3-209ENST00000509330 DCP1AQ9NPI6 582 aaPredicted RBP17.36■□□□□ 0.37
PHF3-209ENST00000509330 POLLQ9UGP5 575 aa17.36■□□□□ 0.37
PHF3-209ENST00000509330 GGA1Q9UJY5 639 aa17.36■□□□□ 0.37
PHF3-209ENST00000509330 MTMR7Q9Y216 660 aa17.36■□□□□ 0.37
PHF3-209ENST00000509330 WDR19Q8NEZ3 1342 aa17.35■□□□□ 0.37
PHF3-209ENST00000509330 SEMA3EO15041 775 aa17.35■□□□□ 0.37
PHF3-209ENST00000509330 PDIA4P13667 645 aaKnown RBP17.35■□□□□ 0.37
PHF3-209ENST00000509330 GNL2Q13823 731 aaKnown RBP17.35■□□□□ 0.37
PHF3-209ENST00000509330 PIBF1Q8WXW3 757 aa17.35■□□□□ 0.37
PHF3-209ENST00000509330 RNF41Q9H4P4 317 aaPredicted RBP17.35■□□□□ 0.37
PHF3-209ENST00000509330 CFAP45Q9UL16 551 aa17.35■□□□□ 0.37
PHF3-209ENST00000509330 IRS2Q9Y4H2 1338 aa17.35■□□□□ 0.37
PHF3-209ENST00000509330 F8W031 263 aaPredicted RBP17.35■□□□□ 0.37
PHF3-209ENST00000509330 ZNF804AQ7Z570 1209 aa17.35■□□□□ 0.37
PHF3-209ENST00000509330 CRNKL1Q9BZJ0 848 aaKnown RBP17.35■□□□□ 0.37
PHF3-209ENST00000509330 LEMD3Q9Y2U8 911 aa17.35■□□□□ 0.37
PHF3-209ENST00000509330 CLIC4Q9Y696 253 aa17.35■□□□□ 0.37
PHF3-209ENST00000509330 CRY2Q49AN0 593 aa17.34■□□□□ 0.37
PHF3-209ENST00000509330 CPLX2Q6PUV4 134 aaKnown RBP17.34■□□□□ 0.37
PHF3-209ENST00000509330 SH3RF3Q8TEJ3 882 aaPredicted RBP17.34■□□□□ 0.37
PHF3-209ENST00000509330 ESR2Q92731 530 aa17.34■□□□□ 0.37
PHF3-209ENST00000509330 NUP62CLQ9H1M0 184 aa17.34■□□□□ 0.37
PHF3-209ENST00000509330 SAP30BPQ9UHR5 308 aaKnown RBP17.34■□□□□ 0.37
PHF3-209ENST00000509330 USP5P45974 858 aa17.34■□□□□ 0.37
PHF3-209ENST00000509330 ERCC4Q92889 916 aaPredicted RBP17.34■□□□□ 0.37
PHF3-209ENST00000509330 RRAGDQ9NQL2 400 aaPredicted RBP17.34■□□□□ 0.37
PHF3-209ENST00000509330 ELP1O95163 1332 aa17.34■□□□□ 0.37
PHF3-209ENST00000509330 A0A087WWV3 80 aa17.34■□□□□ 0.37
PHF3-209ENST00000509330 MMP10P09238 476 aa17.34■□□□□ 0.37
PHF3-209ENST00000509330 RTN1Q16799 776 aa17.34■□□□□ 0.37
PHF3-209ENST00000509330 SGMS1Q86VZ5 419 aa17.34■□□□□ 0.37
PHF3-209ENST00000509330 DYNLL2Q96FJ2 89 aa17.34■□□□□ 0.37
PHF3-209ENST00000509330 CD209Q9NNX6 404 aa17.34■□□□□ 0.37
PHF3-209ENST00000509330 LIFRP42702 1097 aa17.33■□□□□ 0.37
PHF3-209ENST00000509330 NTRK3Q16288 839 aa17.33■□□□□ 0.37
PHF3-209ENST00000509330 KRT40Q6A162 431 aa17.33■□□□□ 0.37
PHF3-209ENST00000509330 ZNF654Q8IZM8 581 aa17.33■□□□□ 0.37
PHF3-209ENST00000509330 KCNJ14Q9UNX9 436 aa17.33■□□□□ 0.37
PHF3-209ENST00000509330 ENAHQ8N8S7 591 aaPredicted RBP17.33■□□□□ 0.36
PHF3-209ENST00000509330 TDRD7Q8NHU6 1098 aaKnown RBP17.33■□□□□ 0.36
PHF3-209ENST00000509330 TGFBRAP1Q8WUH2 860 aa17.33■□□□□ 0.36
PHF3-209ENST00000509330 TNMDQ9H2S6 317 aa17.33■□□□□ 0.36
PHF3-209ENST00000509330 ZNF772Q68DY9 489 aaPredicted RBP17.32■□□□□ 0.36
PHF3-209ENST00000509330 MAPKAPK5Q8IW41 473 aa17.32■□□□□ 0.36
PHF3-209ENST00000509330 CCAR1Q8IX12 1150 aaKnown RBP17.32■□□□□ 0.36
PHF3-209ENST00000509330 TBC1D16Q8TBP0 767 aa17.32■□□□□ 0.36
PHF3-209ENST00000509330 GOLPH3LQ9H4A5 285 aa17.32■□□□□ 0.36
PHF3-209ENST00000509330 KIF23Q02241 960 aaPredicted RBP17.32■□□□□ 0.36
PHF3-209ENST00000509330 SF3A1Q15459 793 aaKnown RBP17.32■□□□□ 0.36
PHF3-209ENST00000509330 ZNF396Q96N95 335 aaPredicted RBP17.32■□□□□ 0.36
PHF3-209ENST00000509330 MXD3Q9BW11 206 aa17.32■□□□□ 0.36
PHF3-209ENST00000509330 BRIP1Q9BX63 1249 aa17.32■□□□□ 0.36
PHF3-209ENST00000509330 PPEF1O14829 653 aaPredicted RBP17.31■□□□□ 0.36
PHF3-209ENST00000509330 CDKL5O76039 1030 aa17.31■□□□□ 0.36
PHF3-209ENST00000509330 SSRP1Q08945 709 aaKnown RBP17.31■□□□□ 0.36
PHF3-209ENST00000509330 STK38Q15208 465 aa17.31■□□□□ 0.36
PHF3-209ENST00000509330 SLC44A5Q8NCS7 719 aa17.31■□□□□ 0.36
PHF3-209ENST00000509330 RXRBP28702 533 aa17.31■□□□□ 0.36
PHF3-209ENST00000509330 MARCKSP29966 332 aaPredicted RBP17.31■□□□□ 0.36
PHF3-209ENST00000509330 MFSD14BQ5SR56 506 aa17.31■□□□□ 0.36
PHF3-209ENST00000509330 IFIT1BQ5T764 474 aaKnown RBP17.31■□□□□ 0.36
PHF3-209ENST00000509330 WDR66Q8TBY9 1149 aa17.31■□□□□ 0.36
PHF3-209ENST00000509330 ZNF622Q969S3 477 aaKnown RBP eCLIP17.31■□□□□ 0.362e-9■□□□□ 10.2
PHF3-209ENST00000509330 ZSCAN10Q96SZ4 725 aaPredicted RBP17.31■□□□□ 0.36
PHF3-209ENST00000509330 ATP2B1P20020 1258 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms