RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 CLRN2A0PK11 232 aa8.9□□□□□ -0.98
TOPBP1-207ENST00000509162 H7C1D1 291 aa8.9□□□□□ -0.98
TOPBP1-207ENST00000509162 CHGBP05060 677 aa8.9□□□□□ -0.98
TOPBP1-207ENST00000509162 CRKP46108 304 aa8.9□□□□□ -0.98
TOPBP1-207ENST00000509162 PSEN2P49810 448 aa8.9□□□□□ -0.98
TOPBP1-207ENST00000509162 MAP3K9P80192 1104 aa8.9□□□□□ -0.98
TOPBP1-207ENST00000509162 MOB2Q70IA6 237 aa8.9□□□□□ -0.98
TOPBP1-207ENST00000509162 IL27Q8NEV9 243 aa8.9□□□□□ -0.98
TOPBP1-207ENST00000509162 RHPN1Q8TCX5 695 aa8.9□□□□□ -0.98
TOPBP1-207ENST00000509162 OTUD7AQ8TE49 926 aaPredicted RBP8.9□□□□□ -0.98
TOPBP1-207ENST00000509162 CDCA5Q96FF9 252 aa8.9□□□□□ -0.98
TOPBP1-207ENST00000509162 CCDC8Q9H0W5 538 aaPredicted RBP8.9□□□□□ -0.98
TOPBP1-207ENST00000509162 PIH1D3Q9NQM4 214 aaKnown RBP8.9□□□□□ -0.98
TOPBP1-207ENST00000509162 TTF2Q9UNY4 1162 aaKnown RBP8.9□□□□□ -0.98
TOPBP1-207ENST00000509162 DAGLAQ9Y4D2 1042 aa8.9□□□□□ -0.98
TOPBP1-207ENST00000509162 MYH2Q9UKX2 1941 aa8.9□□□□□ -0.99
TOPBP1-207ENST00000509162 FOCADQ5VW36 1801 aa8.89□□□□□ -0.99
TOPBP1-207ENST00000509162 GAKO14976 1311 aa8.89□□□□□ -0.99
TOPBP1-207ENST00000509162 SLURP2P0DP57 97 aa8.89□□□□□ -0.99
TOPBP1-207ENST00000509162 MS4A1P11836 297 aa8.89□□□□□ -0.99
TOPBP1-207ENST00000509162 CACNB3P54284 484 aa8.89□□□□□ -0.99
TOPBP1-207ENST00000509162 IRX6P78412 446 aaPredicted RBP8.89□□□□□ -0.99
TOPBP1-207ENST00000509162 DMRTA1Q5VZB9 504 aa8.89□□□□□ -0.99
TOPBP1-207ENST00000509162 APOBEC3HQ6NTF7 200 aaKnown RBP8.89□□□□□ -0.99
TOPBP1-207ENST00000509162 TBC1D9Q6ZT07 1266 aa8.89□□□□□ -0.99
TOPBP1-207ENST00000509162 KRT26Q7Z3Y9 468 aa8.89□□□□□ -0.99
TOPBP1-207ENST00000509162 ADGRA1Q86SQ6 560 aa8.89□□□□□ -0.99
TOPBP1-207ENST00000509162 RPAP2Q8IXW5 612 aaPredicted RBP8.89□□□□□ -0.99
TOPBP1-207ENST00000509162 TEPSINQ96N21 525 aa8.89□□□□□ -0.99
TOPBP1-207ENST00000509162 ANTXR1Q9H6X2 564 aa8.89□□□□□ -0.99
TOPBP1-207ENST00000509162 SNRKQ9NRH2 765 aa8.89□□□□□ -0.99
TOPBP1-207ENST00000509162 HDAC5Q9UQL6 1122 aa8.89□□□□□ -0.99
TOPBP1-207ENST00000509162 SUPT16HQ9Y5B9 1047 aaKnown RBP8.89□□□□□ -0.99
TOPBP1-207ENST00000509162 HTTP42858 3142 aa8.88□□□□□ -0.99
TOPBP1-207ENST00000509162 APBB1O00213 710 aa8.88□□□□□ -0.99
TOPBP1-207ENST00000509162 ZAP70P43403 619 aa8.88□□□□□ -0.99
TOPBP1-207ENST00000509162 NFIAQ12857 509 aa8.88□□□□□ -0.99
TOPBP1-207ENST00000509162 G3BP1Q13283 466 aaKnown RBP eCLIP8.88□□□□□ -0.99
TOPBP1-207ENST00000509162 CAVIN4Q5BKX8 364 aa8.88□□□□□ -0.99
TOPBP1-207ENST00000509162 TSHZ3Q63HK5 1081 aa8.88□□□□□ -0.99
TOPBP1-207ENST00000509162 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.88□□□□□ -0.99
TOPBP1-207ENST00000509162 EDC3Q96F86 508 aaKnown RBP8.88□□□□□ -0.99
TOPBP1-207ENST00000509162 ZIC5Q96T25 663 aa8.88□□□□□ -0.99
TOPBP1-207ENST00000509162 MKRN1Q9UHC7 482 aaKnown RBP8.88□□□□□ -0.99
TOPBP1-207ENST00000509162 RASSF10A6NK89 507 aa8.87□□□□□ -0.99
TOPBP1-207ENST00000509162 TMEM88BA6NKF7 163 aa8.87□□□□□ -0.99
TOPBP1-207ENST00000509162 HRO43593 1189 aa8.87□□□□□ -0.99
TOPBP1-207ENST00000509162 CELF2O95319 508 aaKnown RBP8.87□□□□□ -0.99
TOPBP1-207ENST00000509162 CYP2E1P05181 493 aaPredicted RBP8.87□□□□□ -0.99
TOPBP1-207ENST00000509162 RHBDL3P58872 404 aa8.87□□□□□ -0.99
TOPBP1-207ENST00000509162 SLFNL1Q499Z3 407 aa8.87□□□□□ -0.99
TOPBP1-207ENST00000509162 AACSQ86V21 672 aa8.87□□□□□ -0.99
TOPBP1-207ENST00000509162 VPS37DQ86XT2 251 aa8.87□□□□□ -0.99
TOPBP1-207ENST00000509162 SPATA5Q8NB90 893 aa8.87□□□□□ -0.99
TOPBP1-207ENST00000509162 KLRG1Q96E93 195 aa8.87□□□□□ -0.99
TOPBP1-207ENST00000509162 NEUROD6Q96NK8 337 aa8.87□□□□□ -0.99
TOPBP1-207ENST00000509162 KCNK17Q96T54 332 aa8.87□□□□□ -0.99
TOPBP1-207ENST00000509162 TDRD3Q9H7E2 651 aaKnown RBP8.87□□□□□ -0.99
TOPBP1-207ENST00000509162 ZNF70Q9UC06 446 aaPredicted RBP8.87□□□□□ -0.99
TOPBP1-207ENST00000509162 SERPINA10Q9UK55 444 aa8.87□□□□□ -0.99
TOPBP1-207ENST00000509162 TLL2Q9Y6L7 1015 aa8.87□□□□□ -0.99
TOPBP1-207ENST00000509162 FAM155AB1AL88 458 aaPredicted RBP8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 VEGFBP49765 207 aa8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 MECOMQ03112 1051 aa8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 OS9Q13438 667 aaPredicted RBP8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 DLGAP5Q15398 846 aa8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 CDC37L1Q7L3B6 337 aa8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 SH3BP5LQ7L8J4 393 aa8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 SAPCD2Q86UD0 394 aa8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 ZFPM1Q8IX07 1006 aa8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 JMYQ8N9B5 988 aa8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 TBC1D22AQ8WUA7 517 aa8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 NSUN4Q96CB9 384 aaKnown RBP8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 ZNF512BQ96KM6 892 aaPredicted RBP8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 ZDHHC15Q96MV8 337 aa8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 SLC4A5Q9BY07 1137 aa8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 ZMYND15Q9H091 742 aa8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 DCTPP1Q9H773 170 aa8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 ZNF408Q9H9D4 720 aa8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 DDX4Q9NQI0 724 aaKnown RBP8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 FAM198AQ9UFP1 575 aa8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 DENND2AQ9ULE3 1009 aa8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 AKAP2Q9Y2D5 859 aa8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 MYH7P12883 1935 aa8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 RPAP1Q9BWH6 1393 aaPredicted RBP8.86□□□□□ -0.99
TOPBP1-207ENST00000509162 NAV1Q8NEY1 1877 aa8.85□□□□□ -0.99
TOPBP1-207ENST00000509162 MROH7-TTC4A0A0A0MT08 1334 aa8.85□□□□□ -0.99
TOPBP1-207ENST00000509162 WDHD1O75717 1129 aaPredicted RBP8.85□□□□□ -0.99
TOPBP1-207ENST00000509162 IGHDP01880 384 aa8.85□□□□□ -0.99
TOPBP1-207ENST00000509162 PTPREP23469 700 aa8.85□□□□□ -0.99
TOPBP1-207ENST00000509162 HDLBPQ00341 1268 aaKnown RBP8.85□□□□□ -0.99
TOPBP1-207ENST00000509162 AMHR2Q16671 573 aa8.85□□□□□ -0.99
TOPBP1-207ENST00000509162 CYP4F22Q6NT55 531 aa8.85□□□□□ -0.99
TOPBP1-207ENST00000509162 CDC42EP5Q6NZY7 148 aa8.85□□□□□ -0.99
TOPBP1-207ENST00000509162 WDR66Q8TBY9 1149 aa8.85□□□□□ -0.99
TOPBP1-207ENST00000509162 ZDHHC16Q969W1 377 aa8.85□□□□□ -0.99
TOPBP1-207ENST00000509162 KIF1BPQ96EK5 621 aa8.85□□□□□ -0.99
TOPBP1-207ENST00000509162 TMEM39BQ9GZU3 492 aa8.85□□□□□ -0.99
TOPBP1-207ENST00000509162 TCP10L2B9ZVM9 353 aa8.84□□□□□ -0.99
TOPBP1-207ENST00000509162 AOC2O75106 756 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms