RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 RHPN1Q8TCX5 695 aa22.79■■□□□ 1.24
UBE3D-207ENST00000509102 ZNF296Q8WUU4 475 aaPredicted RBP22.79■■□□□ 1.24
UBE3D-207ENST00000509102 TLR7Q9NYK1 1049 aaKnown RBP22.79■■□□□ 1.24
UBE3D-207ENST00000509102 SNCAIPQ9Y6H5 919 aa22.79■■□□□ 1.24
UBE3D-207ENST00000509102 CCL15-CCL14A0A0B4J2E2 113 aa22.78■■□□□ 1.24
UBE3D-207ENST00000509102 TESPA1A2RU30 521 aaPredicted RBP22.78■■□□□ 1.24
UBE3D-207ENST00000509102 APBB1O00213 710 aa22.78■■□□□ 1.24
UBE3D-207ENST00000509102 IGF2BP3O00425 579 aaKnown RBP eCLIP22.78■■□□□ 1.24
UBE3D-207ENST00000509102 FKTNO75072 461 aa22.78■■□□□ 1.24
UBE3D-207ENST00000509102 RAB11FIP3O75154 756 aa22.78■■□□□ 1.24
UBE3D-207ENST00000509102 CCL15Q16663 113 aa22.78■■□□□ 1.24
UBE3D-207ENST00000509102 LAMB1P07942 1786 aa22.77■■□□□ 1.24
UBE3D-207ENST00000509102 NPM3O75607 178 aaKnown RBP22.77■■□□□ 1.24
UBE3D-207ENST00000509102 CYP2E1P05181 493 aaPredicted RBP22.77■■□□□ 1.24
UBE3D-207ENST00000509102 CETPP11597 493 aa22.77■■□□□ 1.24
UBE3D-207ENST00000509102 ZAP70P43403 619 aa22.77■■□□□ 1.24
UBE3D-207ENST00000509102 PPATQ06203 517 aa22.77■■□□□ 1.24
UBE3D-207ENST00000509102 PPIL2Q13356 520 aa22.77■■□□□ 1.24
UBE3D-207ENST00000509102 SNAPC2Q13487 334 aa22.77■■□□□ 1.24
UBE3D-207ENST00000509102 ZFPM1Q8IX07 1006 aa22.77■■□□□ 1.24
UBE3D-207ENST00000509102 CNKSR2Q8WXI2 1034 aa22.77■■□□□ 1.24
UBE3D-207ENST00000509102 IL1RAPL2Q9NP60 686 aa22.77■■□□□ 1.24
UBE3D-207ENST00000509102 RFX7Q2KHR2 1363 aa22.76■■□□□ 1.23
UBE3D-207ENST00000509102 CCDC85CA6NKD9 419 aa22.76■■□□□ 1.23
UBE3D-207ENST00000509102 IFIT2P09913 472 aaKnown RBP22.76■■□□□ 1.23
UBE3D-207ENST00000509102 INPP5BP32019 993 aa22.76■■□□□ 1.23
UBE3D-207ENST00000509102 RHBDL3P58872 404 aa22.76■■□□□ 1.23
UBE3D-207ENST00000509102 PKN2Q16513 984 aaKnown RBP22.76■■□□□ 1.23
UBE3D-207ENST00000509102 TEX11Q8IYF3 940 aa22.76■■□□□ 1.23
UBE3D-207ENST00000509102 ZNF384Q8TF68 577 aa22.76■■□□□ 1.23
UBE3D-207ENST00000509102 MS4A4AQ96JQ5 239 aa22.76■■□□□ 1.23
UBE3D-207ENST00000509102 ZNF112Q9UJU3 913 aa22.76■■□□□ 1.23
UBE3D-207ENST00000509102 C20orf194Q5TEA3 1177 aa22.75■■□□□ 1.23
UBE3D-207ENST00000509102 DDX4Q9NQI0 724 aaKnown RBP22.75■■□□□ 1.23
UBE3D-207ENST00000509102 PICK1Q9NRD5 415 aa22.75■■□□□ 1.23
UBE3D-207ENST00000509102 MAST2Q6P0Q8 1798 aa22.75■■□□□ 1.23
UBE3D-207ENST00000509102 DOCK2Q92608 1830 aa22.74■■□□□ 1.23
UBE3D-207ENST00000509102 IDH1O75874 414 aaKnown RBP22.74■■□□□ 1.23
UBE3D-207ENST00000509102 NOL9Q5SY16 702 aaKnown RBP22.74■■□□□ 1.23
UBE3D-207ENST00000509102 TMED8Q6PL24 325 aaPredicted RBP22.74■■□□□ 1.23
UBE3D-207ENST00000509102 CERS3Q8IU89 383 aa22.74■■□□□ 1.23
UBE3D-207ENST00000509102 BRI3BPQ8WY22 251 aa22.74■■□□□ 1.23
UBE3D-207ENST00000509102 BCL11AQ9H165 835 aa22.74■■□□□ 1.23
UBE3D-207ENST00000509102 AATFQ9NY61 560 aaKnown RBP eCLIP22.74■■□□□ 1.23
UBE3D-207ENST00000509102 DDTLA6NHG4 134 aaPredicted RBP22.73■■□□□ 1.23
UBE3D-207ENST00000509102 IRF6O14896 467 aa22.73■■□□□ 1.23
UBE3D-207ENST00000509102 MAP3K12Q12852 859 aa22.73■■□□□ 1.23
UBE3D-207ENST00000509102 CRHR2Q13324 411 aa22.73■■□□□ 1.23
UBE3D-207ENST00000509102 TTF1Q15361 905 aaPredicted RBP22.73■■□□□ 1.23
UBE3D-207ENST00000509102 SIRT2Q8IXJ6 389 aa22.73■■□□□ 1.23
UBE3D-207ENST00000509102 PTPN18Q99952 460 aa22.73■■□□□ 1.23
UBE3D-207ENST00000509102 ZFYVE28Q9HCC9 887 aa22.73■■□□□ 1.23
UBE3D-207ENST00000509102 ATRNL1Q5VV63 1379 aa22.73■■□□□ 1.23
UBE3D-207ENST00000509102 TAF1CQ15572 869 aaPredicted RBP22.72■■□□□ 1.23
UBE3D-207ENST00000509102 OSBPL5Q9H0X9 879 aaPredicted RBP22.72■■□□□ 1.23
UBE3D-207ENST00000509102 ZCCHC17Q9NP64 241 aaKnown RBP22.72■■□□□ 1.23
UBE3D-207ENST00000509102 PIH1D3Q9NQM4 214 aaKnown RBP22.72■■□□□ 1.23
UBE3D-207ENST00000509102 PPP4CP60510 307 aa22.71■■□□□ 1.23
UBE3D-207ENST00000509102 SH3BP5LQ7L8J4 393 aa22.71■■□□□ 1.23
UBE3D-207ENST00000509102 SCYL3Q8IZE3 742 aa22.71■■□□□ 1.23
UBE3D-207ENST00000509102 SH3RF3Q8TEJ3 882 aaPredicted RBP22.71■■□□□ 1.23
UBE3D-207ENST00000509102 ERO1AQ96HE7 468 aa22.71■■□□□ 1.23
UBE3D-207ENST00000509102 DHX36Q9H2U1 1008 aaKnown RBP22.71■■□□□ 1.23
UBE3D-207ENST00000509102 R3HDMLQ9H3Y0 253 aa22.71■■□□□ 1.23
UBE3D-207ENST00000509102 COL2A1P02458 1487 aaPredicted RBP22.71■■□□□ 1.23
UBE3D-207ENST00000509102 TBC1D12O60347 775 aa22.7■■□□□ 1.22
UBE3D-207ENST00000509102 CYP7A1P22680 504 aa22.7■■□□□ 1.22
UBE3D-207ENST00000509102 YTHDC1Q96MU7 727 aaKnown RBP22.7■■□□□ 1.22
UBE3D-207ENST00000509102 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.7■■□□□ 1.22
UBE3D-207ENST00000509102 CTNND1O60716 968 aaKnown RBP22.69■■□□□ 1.22
UBE3D-207ENST00000509102 MAP3K10Q02779 954 aa22.69■■□□□ 1.22
UBE3D-207ENST00000509102 ARHGEF6Q15052 776 aa22.69■■□□□ 1.22
UBE3D-207ENST00000509102 TRIM34Q9BYJ4 488 aa22.69■■□□□ 1.22
UBE3D-207ENST00000509102 PHF20L1A8MW92 1017 aa22.68■■□□□ 1.22
UBE3D-207ENST00000509102 SP3Q02447 781 aa22.68■■□□□ 1.22
UBE3D-207ENST00000509102 FAM43AQ8N2R8 423 aa22.68■■□□□ 1.22
UBE3D-207ENST00000509102 MAGEB6Q8N7X4 407 aa22.68■■□□□ 1.22
UBE3D-207ENST00000509102 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.68■■□□□ 1.22
UBE3D-207ENST00000509102 LRRCC1Q9C099 1032 aa22.68■■□□□ 1.22
UBE3D-207ENST00000509102 HERC5Q9UII4 1024 aaKnown RBP22.68■■□□□ 1.22
UBE3D-207ENST00000509102 KCNH4Q9UQ05 1017 aa22.68■■□□□ 1.22
UBE3D-207ENST00000509102 CXCL11O14625 94 aa22.67■■□□□ 1.22
UBE3D-207ENST00000509102 TGFBRAP1Q8WUH2 860 aa22.67■■□□□ 1.22
UBE3D-207ENST00000509102 PI4KBQ9UBF8 816 aa22.67■■□□□ 1.22
UBE3D-207ENST00000509102 ZHX2Q9Y6X8 837 aa22.67■■□□□ 1.22
UBE3D-207ENST00000509102 BTBD19C9JJ37 291 aa22.66■■□□□ 1.22
UBE3D-207ENST00000509102 FBXO46Q6PJ61 603 aaPredicted RBP22.66■■□□□ 1.22
UBE3D-207ENST00000509102 ADGRA1Q86SQ6 560 aa22.66■■□□□ 1.22
UBE3D-207ENST00000509102 DNAJC2Q99543 621 aaKnown RBP22.66■■□□□ 1.22
UBE3D-207ENST00000509102 TRIM17Q9Y577 477 aa22.66■■□□□ 1.22
UBE3D-207ENST00000509102 NDUFB9Q9Y6M9 179 aa22.66■■□□□ 1.22
UBE3D-207ENST00000509102 FLT1P17948 1338 aa22.65■■□□□ 1.22
UBE3D-207ENST00000509102 HLA-DOAP06340 250 aa22.65■■□□□ 1.22
UBE3D-207ENST00000509102 PTPRAP18433 802 aa22.65■■□□□ 1.22
UBE3D-207ENST00000509102 FASTKD5Q7L8L6 764 aaKnown RBP22.65■■□□□ 1.22
UBE3D-207ENST00000509102 ANKRD23Q86SG2 305 aa22.65■■□□□ 1.22
UBE3D-207ENST00000509102 MAPKAPK5Q8IW41 473 aa22.65■■□□□ 1.22
UBE3D-207ENST00000509102 CRACR2BQ8N4Y2 399 aaPredicted RBP22.65■■□□□ 1.22
UBE3D-207ENST00000509102 ANTXR1Q9H6X2 564 aa22.65■■□□□ 1.22
UBE3D-207ENST00000509102 USP5P45974 858 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms