RNA–Protein interactions for RNA: ENST00000508657.5

KLHL3-209, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,981 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-209ENST00000508657 ZNF653Q96CK0 615 aa10.09□□□□□ -0.79
KLHL3-209ENST00000508657 NAA15Q9BXJ9 866 aaKnown RBP10.09□□□□□ -0.79
KLHL3-209ENST00000508657 PIK3AP1Q6ZUJ8 805 aa10.09□□□□□ -0.79
KLHL3-209ENST00000508657 LRRC47Q8N1G4 583 aaKnown RBP10.09□□□□□ -0.79
KLHL3-209ENST00000508657 TTC36A6NLP5 189 aa10.09□□□□□ -0.79
KLHL3-209ENST00000508657 TNNI1P19237 187 aa10.09□□□□□ -0.79
KLHL3-209ENST00000508657 TTC22Q5TAA0 569 aa10.09□□□□□ -0.79
KLHL3-209ENST00000508657 USPL1Q5W0Q7 1092 aa10.09□□□□□ -0.79
KLHL3-209ENST00000508657 DCAF15Q66K64 600 aa10.09□□□□□ -0.79
KLHL3-209ENST00000508657 GIMAP7Q8NHV1 300 aa10.09□□□□□ -0.79
KLHL3-209ENST00000508657 PLVAPQ9BX97 442 aa10.09□□□□□ -0.79
KLHL3-209ENST00000508657 SH2B1Q9NRF2 756 aaPredicted RBP10.09□□□□□ -0.79
KLHL3-209ENST00000508657 HECW1Q76N89 1606 aa10.09□□□□□ -0.79
KLHL3-209ENST00000508657 GOLGA6L9A6NEM1 432 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 ZSCAN12O43309 604 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 TMTC2Q8N394 836 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 PPP1R9BQ96SB3 815 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 NAP1L4Q99733 375 aaKnown RBP10.08□□□□□ -0.8
KLHL3-209ENST00000508657 ITM2BQ9Y287 266 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 RBM8AQ9Y5S9 174 aaKnown RBP10.08□□□□□ -0.8
KLHL3-209ENST00000508657 PTPRCP08575 1304 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 SH3TC1Q8TE82 1336 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 DAPK1P53355 1430 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 EPSTI1Q96J88 318 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 MAP10Q9P2G4 905 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 ZEB2O60315 1214 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 PLCB4Q15147 1175 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 CCDC184Q52MB2 194 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 FAM196AQ6ZSG2 479 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 DYMQ7RTS9 669 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 DEPTORQ8TB45 409 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 PIDD1Q9HB75 910 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 ANKFY1Q9P2R3 1169 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 RNF113AO15541 343 aaKnown RBP10.08□□□□□ -0.8
KLHL3-209ENST00000508657 KCTD2Q14681 263 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 PTPN14Q15678 1187 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 IFI16Q16666 785 aaKnown RBP10.08□□□□□ -0.8
KLHL3-209ENST00000508657 KANK3Q6NY19 840 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 MYL10Q9BUA6 226 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 NUB1Q9Y5A7 615 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 DTNBO60941 627 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 PSMD6Q15008 389 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 FBF1Q8TES7 1133 aa10.08□□□□□ -0.8
KLHL3-209ENST00000508657 TRAF5O00463 557 aa10.07□□□□□ -0.8
KLHL3-209ENST00000508657 PPEF1O14829 653 aaPredicted RBP10.07□□□□□ -0.8
KLHL3-209ENST00000508657 ZFYP08048 801 aaPredicted RBP10.07□□□□□ -0.8
KLHL3-209ENST00000508657 EPB41P11171 864 aaKnown RBP10.07□□□□□ -0.8
KLHL3-209ENST00000508657 TAB3Q8N5C8 712 aaPredicted RBP10.07□□□□□ -0.8
KLHL3-209ENST00000508657 RTEL1Q9NZ71 1219 aa10.07□□□□□ -0.8
KLHL3-209ENST00000508657 SHTN1A0MZ66 631 aa10.07□□□□□ -0.8
KLHL3-209ENST00000508657 KRT33BQ14525 404 aa10.07□□□□□ -0.8
KLHL3-209ENST00000508657 DCLK2Q8N568 766 aa10.07□□□□□ -0.8
KLHL3-209ENST00000508657 CCDC155Q8N6L0 562 aa10.07□□□□□ -0.8
KLHL3-209ENST00000508657 NEK11Q8NG66 645 aa10.07□□□□□ -0.8
KLHL3-209ENST00000508657 RBM46Q8TBY0 533 aaKnown RBP10.07□□□□□ -0.8
KLHL3-209ENST00000508657 CCDC160A6NGH7 325 aa10.07□□□□□ -0.8
KLHL3-209ENST00000508657 PDE8AO60658 829 aa10.07□□□□□ -0.8
KLHL3-209ENST00000508657 GCNT3O95395 438 aa10.07□□□□□ -0.8
KLHL3-209ENST00000508657 EN1Q05925 392 aaPredicted RBP10.07□□□□□ -0.8
KLHL3-209ENST00000508657 R3HDM1Q15032 1099 aaKnown RBP10.07□□□□□ -0.8
KLHL3-209ENST00000508657 C20orf194Q5TEA3 1177 aa10.07□□□□□ -0.8
KLHL3-209ENST00000508657 TBC1D9Q6ZT07 1266 aa10.07□□□□□ -0.8
KLHL3-209ENST00000508657 LBHD1Q9BQE6 289 aaPredicted RBP10.07□□□□□ -0.8
KLHL3-209ENST00000508657 SCAND2PQ9GZW5 306 aaPredicted RBP10.07□□□□□ -0.8
KLHL3-209ENST00000508657 PSMA7O14818 248 aa10.07□□□□□ -0.8
KLHL3-209ENST00000508657 GIPC1O14908 333 aa10.07□□□□□ -0.8
KLHL3-209ENST00000508657 C21orf2O43822 256 aa10.07□□□□□ -0.8
KLHL3-209ENST00000508657 GMNNO75496 209 aa10.07□□□□□ -0.8
KLHL3-209ENST00000508657 GNAT2P19087 354 aa10.07□□□□□ -0.8
KLHL3-209ENST00000508657 MARK3P27448 753 aa10.07□□□□□ -0.8
KLHL3-209ENST00000508657 UBXN1Q04323 297 aa10.07□□□□□ -0.8
KLHL3-209ENST00000508657 SPATA24Q86W54 205 aa10.07□□□□□ -0.8
KLHL3-209ENST00000508657 NELFCDQ8IXH7 590 aa10.07□□□□□ -0.8
KLHL3-209ENST00000508657 KSR1Q8IVT5 923 aa10.07□□□□□ -0.8
KLHL3-209ENST00000508657 RNF217Q8TC41 542 aa10.07□□□□□ -0.8
KLHL3-209ENST00000508657 MAGI1Q96QZ7 1491 aaPredicted RBP10.07□□□□□ -0.8
KLHL3-209ENST00000508657 RARSP54136 660 aaKnown RBP10.06□□□□□ -0.8
KLHL3-209ENST00000508657 CTR9Q6PD62 1173 aa10.06□□□□□ -0.8
KLHL3-209ENST00000508657 KCNK9Q9NPC2 374 aa10.06□□□□□ -0.8
KLHL3-209ENST00000508657 SAT1P21673 171 aa10.06□□□□□ -0.8
KLHL3-209ENST00000508657 PUM3Q15397 648 aaKnown RBP10.06□□□□□ -0.8
KLHL3-209ENST00000508657 CCDC6Q16204 474 aa10.06□□□□□ -0.8
KLHL3-209ENST00000508657 WDR66Q8TBY9 1149 aa10.06□□□□□ -0.8
KLHL3-209ENST00000508657 TOPBP1Q92547 1522 aa10.06□□□□□ -0.8
KLHL3-209ENST00000508657 TRIM27P14373 513 aa10.06□□□□□ -0.8
KLHL3-209ENST00000508657 HOXC9P31274 260 aa10.06□□□□□ -0.8
KLHL3-209ENST00000508657 MTRQ99707 1265 aa10.06□□□□□ -0.8
KLHL3-209ENST00000508657 SLFN5Q08AF3 891 aa10.06□□□□□ -0.8
KLHL3-209ENST00000508657 ANGEL1Q9UNK9 670 aaKnown RBP10.06□□□□□ -0.8
KLHL3-209ENST00000508657 ZSCAN20P17040 1043 aaPredicted RBP10.06□□□□□ -0.8
KLHL3-209ENST00000508657 HSPA1LP34931 641 aa10.06□□□□□ -0.8
KLHL3-209ENST00000508657 ZNF569Q5MCW4 686 aa10.06□□□□□ -0.8
KLHL3-209ENST00000508657 RSPH3Q86UC2 560 aa10.06□□□□□ -0.8
KLHL3-209ENST00000508657 SELENOOQ9BVL4 669 aa10.06□□□□□ -0.8
KLHL3-209ENST00000508657 CCDC141Q6ZP82 1450 aa10.06□□□□□ -0.8
KLHL3-209ENST00000508657 TLDC2A0PJX2 215 aa10.06□□□□□ -0.8
KLHL3-209ENST00000508657 ELF1P32519 619 aa10.06□□□□□ -0.8
KLHL3-209ENST00000508657 FBXW4P57775 412 aa10.06□□□□□ -0.8
KLHL3-209ENST00000508657 HS1BP3Q53T59 392 aa10.06□□□□□ -0.8
KLHL3-209ENST00000508657 CEP57Q86XR8 500 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms