RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 RASSF10A6NK89 507 aa11.01□□□□□ -0.65
NUP54-207ENST00000508583 TRIM6-TRIM34B2RNG4 842 aa11.01□□□□□ -0.65
NUP54-207ENST00000508583 HIP1O00291 1037 aa11.01□□□□□ -0.65
NUP54-207ENST00000508583 WDHD1O75717 1129 aaPredicted RBP11.01□□□□□ -0.65
NUP54-207ENST00000508583 USP5P45974 858 aa11.01□□□□□ -0.65
NUP54-207ENST00000508583 RGS3P49796 1198 aa11.01□□□□□ -0.65
NUP54-207ENST00000508583 CACNB3P54284 484 aa11.01□□□□□ -0.65
NUP54-207ENST00000508583 HUNKP57058 714 aa11.01□□□□□ -0.65
NUP54-207ENST00000508583 TCP10Q12799 353 aa11.01□□□□□ -0.65
NUP54-207ENST00000508583 PICALMQ13492 652 aa11.01□□□□□ -0.65
NUP54-207ENST00000508583 PAXIP1Q6ZW49 1069 aaPredicted RBP11.01□□□□□ -0.65
NUP54-207ENST00000508583 SAPCD2Q86UD0 394 aa11.01□□□□□ -0.65
NUP54-207ENST00000508583 AMOTL1Q8IY63 956 aa11.01□□□□□ -0.65
NUP54-207ENST00000508583 MIGA1Q8NAN2 632 aa11.01□□□□□ -0.65
NUP54-207ENST00000508583 APPBP2Q92624 585 aa11.01□□□□□ -0.65
NUP54-207ENST00000508583 AIDAQ96BJ3 306 aa11.01□□□□□ -0.65
NUP54-207ENST00000508583 EDC3Q96F86 508 aaKnown RBP11.01□□□□□ -0.65
NUP54-207ENST00000508583 CSRNP1Q96S65 589 aa11.01□□□□□ -0.65
NUP54-207ENST00000508583 TMEM39BQ9GZU3 492 aa11.01□□□□□ -0.65
NUP54-207ENST00000508583 PPP4R2Q9NY27 417 aa11.01□□□□□ -0.65
NUP54-207ENST00000508583 CNTNAP1P78357 1384 aa11.01□□□□□ -0.65
NUP54-207ENST00000508583 TCRBV5S4A2TA0A5A2 114 aa11□□□□□ -0.65
NUP54-207ENST00000508583 RNF113AO15541 343 aaKnown RBP11□□□□□ -0.65
NUP54-207ENST00000508583 HLA-DOAP06340 250 aa11□□□□□ -0.65
NUP54-207ENST00000508583 GNAT2P19087 354 aa11□□□□□ -0.65
NUP54-207ENST00000508583 NFIAQ12857 509 aa11□□□□□ -0.65
NUP54-207ENST00000508583 MAP3K11Q16584 847 aa11□□□□□ -0.65
NUP54-207ENST00000508583 DEFB115Q30KQ5 88 aa11□□□□□ -0.65
NUP54-207ENST00000508583 NBPF12Q5TAG4 269 aaPredicted RBP11□□□□□ -0.65
NUP54-207ENST00000508583 PRAMEF18Q5VWM3 479 aa11□□□□□ -0.65
NUP54-207ENST00000508583 SH3RF3Q8TEJ3 882 aaPredicted RBP11□□□□□ -0.65
NUP54-207ENST00000508583 CCDC102AQ96A19 550 aa11□□□□□ -0.65
NUP54-207ENST00000508583 TRIM34Q9BYJ4 488 aa11□□□□□ -0.65
NUP54-207ENST00000508583 OSBPL5Q9H0X9 879 aaPredicted RBP11□□□□□ -0.65
NUP54-207ENST00000508583 FAM198AQ9UFP1 575 aa11□□□□□ -0.65
NUP54-207ENST00000508583 TAOK2Q9UL54 1235 aa11□□□□□ -0.65
NUP54-207ENST00000508583 ATRNL1Q5VV63 1379 aa11□□□□□ -0.65
NUP54-207ENST00000508583 ADGRA1Q86SQ6 560 aa10.99□□□□□ -0.65
NUP54-207ENST00000508583 ANKRD13AQ8IZ07 590 aa10.99□□□□□ -0.65
NUP54-207ENST00000508583 TGFBRAP1Q8WUH2 860 aa10.99□□□□□ -0.65
NUP54-207ENST00000508583 RILPL2Q969X0 211 aa10.99□□□□□ -0.65
NUP54-207ENST00000508583 TEPSINQ96N21 525 aa10.99□□□□□ -0.65
NUP54-207ENST00000508583 RIOK1Q9BRS2 568 aaKnown RBP10.99□□□□□ -0.65
NUP54-207ENST00000508583 ZNF341Q9BYN7 854 aa10.99□□□□□ -0.65
NUP54-207ENST00000508583 ATP8A2Q9NTI2 1148 aa10.99□□□□□ -0.65
NUP54-207ENST00000508583 PI4KBQ9UBF8 816 aa10.99□□□□□ -0.65
NUP54-207ENST00000508583 HERC5Q9UII4 1024 aaKnown RBP10.99□□□□□ -0.65
NUP54-207ENST00000508583 ANGEL1Q9UNK9 670 aaKnown RBP10.99□□□□□ -0.65
NUP54-207ENST00000508583 CSADQ9Y600 493 aa10.99□□□□□ -0.65
NUP54-207ENST00000508583 FOCADQ5VW36 1801 aa10.99□□□□□ -0.65
NUP54-207ENST00000508583 FLT1P17948 1338 aa10.99□□□□□ -0.65
NUP54-207ENST00000508583 MBD4O95243 580 aa10.98□□□□□ -0.65
NUP54-207ENST00000508583 MFAP1P55081 439 aaKnown RBP10.98□□□□□ -0.65
NUP54-207ENST00000508583 RGMBQ6NW40 437 aa10.98□□□□□ -0.65
NUP54-207ENST00000508583 TTC6Q86TZ1 520 aa10.98□□□□□ -0.65
NUP54-207ENST00000508583 REM2Q8IYK8 340 aaPredicted RBP10.98□□□□□ -0.65
NUP54-207ENST00000508583 KLRG1Q96E93 195 aa10.98□□□□□ -0.65
NUP54-207ENST00000508583 MKRN1Q9UHC7 482 aaKnown RBP10.98□□□□□ -0.65
NUP54-207ENST00000508583 SSC5DA1L4H1 1573 aa10.98□□□□□ -0.65
NUP54-207ENST00000508583 TBC1D12O60347 775 aa10.97□□□□□ -0.65
NUP54-207ENST00000508583 ZNF157P51786 506 aaPredicted RBP10.97□□□□□ -0.65
NUP54-207ENST00000508583 DYNLL1P63167 89 aaKnown RBP10.97□□□□□ -0.65
NUP54-207ENST00000508583 NOGQ13253 232 aa10.97□□□□□ -0.65
NUP54-207ENST00000508583 TTC22Q5TAA0 569 aa10.97□□□□□ -0.65
NUP54-207ENST00000508583 GIMAP6Q6P9H5 292 aa10.97□□□□□ -0.65
NUP54-207ENST00000508583 MAPKAPK5Q8IW41 473 aa10.97□□□□□ -0.65
NUP54-207ENST00000508583 CDAN1Q8IWY9 1227 aa10.97□□□□□ -0.65
NUP54-207ENST00000508583 CRACR2BQ8N4Y2 399 aaPredicted RBP10.97□□□□□ -0.65
NUP54-207ENST00000508583 DNAJC5GQ8N7S2 189 aa10.97□□□□□ -0.65
NUP54-207ENST00000508583 WRNIP1Q96S55 665 aa10.97□□□□□ -0.65
NUP54-207ENST00000508583 NACAP1Q9BZK3 213 aa10.97□□□□□ -0.65
NUP54-207ENST00000508583 DDX4Q9NQI0 724 aaKnown RBP10.97□□□□□ -0.65
NUP54-207ENST00000508583 HELLSQ9NRZ9 838 aa10.97□□□□□ -0.65
NUP54-207ENST00000508583 OTOFQ9HC10 1997 aa10.96□□□□□ -0.65
NUP54-207ENST00000508583 CDK5RAP2Q96SN8 1893 aa10.96□□□□□ -0.65
NUP54-207ENST00000508583 THSD7BQ9C0I4 1608 aa10.96□□□□□ -0.65
NUP54-207ENST00000508583 POLR3DP05423 398 aaPredicted RBP10.96□□□□□ -0.65
NUP54-207ENST00000508583 MAP2K2P36507 400 aa10.96□□□□□ -0.65
NUP54-207ENST00000508583 MAP3K9P80192 1104 aa10.96□□□□□ -0.65
NUP54-207ENST00000508583 PRKG1Q13976 671 aa10.96□□□□□ -0.65
NUP54-207ENST00000508583 ZMYM1Q5SVZ6 1142 aa10.96□□□□□ -0.65
NUP54-207ENST00000508583 LDLRAD1Q5T700 205 aa10.96□□□□□ -0.65
NUP54-207ENST00000508583 FOXP4Q8IVH2 680 aaPredicted RBP10.96□□□□□ -0.65
NUP54-207ENST00000508583 LCORLQ8N3X6 602 aa10.96□□□□□ -0.65
NUP54-207ENST00000508583 SLC10A4Q96EP9 437 aa10.96□□□□□ -0.65
NUP54-207ENST00000508583 CAPNS2Q96L46 248 aa10.96□□□□□ -0.65
NUP54-207ENST00000508583 ARMT1Q9H993 441 aa10.96□□□□□ -0.65
NUP54-207ENST00000508583 DIAPH3Q9NSV4 1193 aa10.96□□□□□ -0.65
NUP54-207ENST00000508583 FZD1Q9UP38 647 aa10.96□□□□□ -0.65
NUP54-207ENST00000508583 SLC4A4Q9Y6R1 1079 aa10.96□□□□□ -0.65
NUP54-207ENST00000508583 MYH1P12882 1939 aa10.96□□□□□ -0.66
NUP54-207ENST00000508583 NAV1Q8NEY1 1877 aa10.95□□□□□ -0.66
NUP54-207ENST00000508583 WDR33Q9C0J8 1336 aaKnown RBP10.95□□□□□ -0.66
NUP54-207ENST00000508583 DDTLA6NHG4 134 aaPredicted RBP10.95□□□□□ -0.66
NUP54-207ENST00000508583 UBE2Q2LH0YL09 131 aa10.95□□□□□ -0.66
NUP54-207ENST00000508583 GPAA1O43292 621 aa10.95□□□□□ -0.66
NUP54-207ENST00000508583 USP2O75604 605 aaPredicted RBP10.95□□□□□ -0.66
NUP54-207ENST00000508583 ZBTB48P10074 688 aaPredicted RBP10.95□□□□□ -0.66
NUP54-207ENST00000508583 PDE4AP27815 886 aa10.95□□□□□ -0.66
NUP54-207ENST00000508583 MAP3K10Q02779 954 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms