RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 PLAGL2Q9UPG8 496 aa8.91□□□□□ -0.98
TRAPPC13-209ENST00000508304 GPR182O15218 404 aa8.9□□□□□ -0.98
TRAPPC13-209ENST00000508304 GADD45BO75293 160 aaPredicted RBP8.9□□□□□ -0.98
TRAPPC13-209ENST00000508304 HCLS1P14317 486 aaPredicted RBP8.9□□□□□ -0.98
TRAPPC13-209ENST00000508304 HNRNPUQ00839 825 aaKnown RBP eCLIP8.9□□□□□ -0.98
TRAPPC13-209ENST00000508304 TMEM265A0A087WTH1 108 aa8.89□□□□□ -0.99
TRAPPC13-209ENST00000508304 RNGTTO60942 597 aaKnown RBP8.89□□□□□ -0.99
TRAPPC13-209ENST00000508304 NEFMP07197 916 aa8.89□□□□□ -0.99
TRAPPC13-209ENST00000508304 SPOCD1Q6ZMY3 1216 aa8.89□□□□□ -0.99
TRAPPC13-209ENST00000508304 B4GALNT3Q6L9W6 998 aa8.88□□□□□ -0.99
TRAPPC13-209ENST00000508304 NIF3L1Q9GZT8 377 aa8.88□□□□□ -0.99
TRAPPC13-209ENST00000508304 TNKS2Q9H2K2 1166 aa8.88□□□□□ -0.99
TRAPPC13-209ENST00000508304 USTQ9Y2C2 406 aa8.88□□□□□ -0.99
TRAPPC13-209ENST00000508304 FBLN7Q53RD9 439 aa8.87□□□□□ -0.99
TRAPPC13-209ENST00000508304 ANGEL2Q5VTE6 544 aaKnown RBP8.87□□□□□ -0.99
TRAPPC13-209ENST00000508304 ARHGAP27Q6ZUM4 889 aa8.87□□□□□ -0.99
TRAPPC13-209ENST00000508304 ISL2Q96A47 359 aa8.87□□□□□ -0.99
TRAPPC13-209ENST00000508304 C1orf115Q9H7X2 142 aa8.87□□□□□ -0.99
TRAPPC13-209ENST00000508304 TMEM39AQ9NV64 488 aa8.87□□□□□ -0.99
TRAPPC13-209ENST00000508304 PPP2R3AQ06190 1150 aa8.86□□□□□ -0.99
TRAPPC13-209ENST00000508304 PKN1Q16512 942 aa8.86□□□□□ -0.99
TRAPPC13-209ENST00000508304 ZC3H12AQ5D1E8 599 aaKnown RBP8.86□□□□□ -0.99
TRAPPC13-209ENST00000508304 SLC23A3Q6PIS1 610 aa8.86□□□□□ -0.99
TRAPPC13-209ENST00000508304 DTHD1Q6ZMT9 781 aa8.86□□□□□ -0.99
TRAPPC13-209ENST00000508304 KSR1Q8IVT5 923 aa8.86□□□□□ -0.99
TRAPPC13-209ENST00000508304 TOP6BLQ8N6T0 577 aa8.86□□□□□ -0.99
TRAPPC13-209ENST00000508304 FLAD1Q8NFF5 587 aa8.86□□□□□ -0.99
TRAPPC13-209ENST00000508304 EPS8L3Q8TE67 593 aaKnown RBP8.86□□□□□ -0.99
TRAPPC13-209ENST00000508304 KCNB2Q92953 911 aa8.86□□□□□ -0.99
TRAPPC13-209ENST00000508304 GPN3Q9UHW5 284 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC13-209ENST00000508304 ERVK-24P63145 666 aa8.85□□□□□ -0.99
TRAPPC13-209ENST00000508304 MESP2Q0VG99 397 aa8.85□□□□□ -0.99
TRAPPC13-209ENST00000508304 FAM214BQ7L5A3 538 aa8.85□□□□□ -0.99
TRAPPC13-209ENST00000508304 RNF214Q8ND24 703 aa8.85□□□□□ -0.99
TRAPPC13-209ENST00000508304 STK35Q8TDR2 534 aa8.85□□□□□ -0.99
TRAPPC13-209ENST00000508304 HEXIM2Q96MH2 286 aaKnown RBP8.85□□□□□ -0.99
TRAPPC13-209ENST00000508304 CSRNP1Q96S65 589 aa8.85□□□□□ -0.99
TRAPPC13-209ENST00000508304 SNX11Q9Y5W9 270 aa8.85□□□□□ -0.99
TRAPPC13-209ENST00000508304 ITIH2P19823 946 aa8.84□□□□□ -0.99
TRAPPC13-209ENST00000508304 FCGRTP55899 365 aa8.84□□□□□ -0.99
TRAPPC13-209ENST00000508304 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.84□□□□□ -0.99
TRAPPC13-209ENST00000508304 SULF2Q8IWU5 870 aa8.84□□□□□ -0.99
TRAPPC13-209ENST00000508304 ALKBH8Q96BT7 664 aaKnown RBP8.84□□□□□ -0.99
TRAPPC13-209ENST00000508304 SLC38A3Q99624 504 aa8.83□□□□□ -1
TRAPPC13-209ENST00000508304 SSU72Q9NP77 194 aaKnown RBP8.83□□□□□ -1
TRAPPC13-209ENST00000508304 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.83□□□□□ -1
TRAPPC13-209ENST00000508304 XRCC5P13010 732 aaKnown RBP8.82□□□□□ -1
TRAPPC13-209ENST00000508304 BHLHE22Q8NFJ8 381 aaPredicted RBP8.82□□□□□ -1
TRAPPC13-209ENST00000508304 TMC1Q8TDI8 760 aa8.82□□□□□ -1
TRAPPC13-209ENST00000508304 FAM84AQ96KN4 292 aa8.82□□□□□ -1
TRAPPC13-209ENST00000508304 DMRTB1Q96MA1 342 aa8.82□□□□□ -1
TRAPPC13-209ENST00000508304 PRDM7Q9NQW5 492 aa8.82□□□□□ -1
TRAPPC13-209ENST00000508304 ARNTP27540 789 aa8.81□□□□□ -1
TRAPPC13-209ENST00000508304 ZSWIM9Q86XI8 627 aa8.81□□□□□ -1
TRAPPC13-209ENST00000508304 ASB11Q8WXH4 323 aa8.81□□□□□ -1
TRAPPC13-209ENST00000508304 CACNA2D2Q9NY47 1150 aa8.81□□□□□ -1
TRAPPC13-209ENST00000508304 ZNF503-AS2A6NEH8 195 aa8.8□□□□□ -1
TRAPPC13-209ENST00000508304 IGF2BP3O00425 579 aaKnown RBP eCLIP8.8□□□□□ -1
TRAPPC13-209ENST00000508304 ZNF252P-AS1Q0IIN9 211 aa8.8□□□□□ -1
TRAPPC13-209ENST00000508304 PI16Q6UXB8 463 aa8.8□□□□□ -1
TRAPPC13-209ENST00000508304 TXNDC2Q86VQ3 553 aa8.8□□□□□ -1
TRAPPC13-209ENST00000508304 SPACA3Q8IXA5 215 aa8.8□□□□□ -1
TRAPPC13-209ENST00000508304 GPBAR1Q8TDU6 330 aa8.8□□□□□ -1
TRAPPC13-209ENST00000508304 RBCK1Q9BYM8 510 aa8.8□□□□□ -1
TRAPPC13-209ENST00000508304 PPP4R2Q9NY27 417 aa8.8□□□□□ -1
TRAPPC13-209ENST00000508304 GTF2IRD1Q9UHL9 959 aa8.8□□□□□ -1
TRAPPC13-209ENST00000508304 LRRC10BA6NIK2 292 aa8.79□□□□□ -1
TRAPPC13-209ENST00000508304 NME2P22392 152 aa8.79□□□□□ -1
TRAPPC13-209ENST00000508304 NTF4P34130 210 aa8.79□□□□□ -1
TRAPPC13-209ENST00000508304 MAP1SQ66K74 1059 aaPredicted RBP8.79□□□□□ -1
TRAPPC13-209ENST00000508304 CILP2Q8IUL8 1156 aa8.79□□□□□ -1
TRAPPC13-209ENST00000508304 KRTAP4-2Q9BYR5 136 aa8.79□□□□□ -1
TRAPPC13-209ENST00000508304 BCO2Q9BYV7 579 aa8.79□□□□□ -1
TRAPPC13-209ENST00000508304 ZP2Q05996 745 aa8.78□□□□□ -1
TRAPPC13-209ENST00000508304 IKZF1Q13422 519 aa8.78□□□□□ -1
TRAPPC13-209ENST00000508304 KRTAP19-4Q3LI73 84 aa8.78□□□□□ -1
TRAPPC13-209ENST00000508304 EMILIN2Q9BXX0 1053 aa8.78□□□□□ -1
TRAPPC13-209ENST00000508304 PRDM10Q9NQV6 1147 aa8.78□□□□□ -1
TRAPPC13-209ENST00000508304 NLRP2Q9NX02 1062 aa8.78□□□□□ -1
TRAPPC13-209ENST00000508304 FAM53CQ9NYF3 392 aa8.78□□□□□ -1
TRAPPC13-209ENST00000508304 CTNND2Q9UQB3 1225 aa8.78□□□□□ -1
TRAPPC13-209ENST00000508304 KCNMB1Q16558 191 aa8.77□□□□□ -1.01
TRAPPC13-209ENST00000508304 NKPD1Q17RQ9 610 aa8.77□□□□□ -1.01
TRAPPC13-209ENST00000508304 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.76□□□□□ -1.01
TRAPPC13-209ENST00000508304 RING1Q06587 406 aa8.75□□□□□ -1.01
TRAPPC13-209ENST00000508304 MLANAQ16655 118 aa8.75□□□□□ -1.01
TRAPPC13-209ENST00000508304 PPM1JQ5JR12 505 aa8.75□□□□□ -1.01
TRAPPC13-209ENST00000508304 MPRIPQ6WCQ1 1025 aa8.75□□□□□ -1.01
TRAPPC13-209ENST00000508304 UBE3DQ7Z6J8 389 aa8.75□□□□□ -1.01
TRAPPC13-209ENST00000508304 AKAP2Q9Y2D5 859 aa8.75□□□□□ -1.01
TRAPPC13-209ENST00000508304 PITPNM2Q9BZ72 1349 aa8.75□□□□□ -1.01
TRAPPC13-209ENST00000508304 EOMESO95936 686 aa8.74□□□□□ -1.01
TRAPPC13-209ENST00000508304 CLCN7P51798 805 aa8.74□□□□□ -1.01
TRAPPC13-209ENST00000508304 ACSBG1Q96GR2 724 aa8.74□□□□□ -1.01
TRAPPC13-209ENST00000508304 NECAB3Q96P71 396 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC13-209ENST00000508304 NXPE4Q6UWF7 544 aa8.73□□□□□ -1.01
TRAPPC13-209ENST00000508304 C3orf58Q8NDZ4 430 aa8.73□□□□□ -1.01
TRAPPC13-209ENST00000508304 LIN37Q96GY3 246 aaPredicted RBP8.73□□□□□ -1.01
TRAPPC13-209ENST00000508304 CBX8Q9HC52 389 aa8.73□□□□□ -1.01
TRAPPC13-209ENST00000508304 LMCD1Q9NZU5 365 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms