RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 CHD4Q14839 1912 aa13.02□□□□□ -0.32
PROM1-207ENST00000508167 GLTPD2A6NH11 291 aa13.02□□□□□ -0.32
PROM1-207ENST00000508167 ZNF213O14771 459 aa13.02□□□□□ -0.32
PROM1-207ENST00000508167 TNNI2P48788 182 aa13.02□□□□□ -0.32
PROM1-207ENST00000508167 GAS2L3Q86XJ1 694 aa13.02□□□□□ -0.32
PROM1-207ENST00000508167 LMBRD1Q9NUN5 540 aa13.02□□□□□ -0.32
PROM1-207ENST00000508167 GPRC5DQ9NZD1 345 aa13.02□□□□□ -0.32
PROM1-207ENST00000508167 U3KPZ7 1027 aaPredicted RBP13.02□□□□□ -0.32
PROM1-207ENST00000508167 BRD1O95696 1058 aa13.02□□□□□ -0.33
PROM1-207ENST00000508167 HSPD1P10809 573 aaKnown RBP13.02□□□□□ -0.33
PROM1-207ENST00000508167 HDLBPQ00341 1268 aaKnown RBP13.02□□□□□ -0.33
PROM1-207ENST00000508167 RBM8AQ9Y5S9 174 aaKnown RBP13.02□□□□□ -0.33
PROM1-207ENST00000508167 PATL2C9JE40 543 aaKnown RBP13.02□□□□□ -0.33
PROM1-207ENST00000508167 HLA-DOAP06340 250 aa13.02□□□□□ -0.33
PROM1-207ENST00000508167 NEK4P51957 841 aa13.02□□□□□ -0.33
PROM1-207ENST00000508167 NBPF9Q3BBW0 867 aa13.02□□□□□ -0.33
PROM1-207ENST00000508167 GPR75-ASB3A0A0A6YYF3 556 aa13.01□□□□□ -0.33
PROM1-207ENST00000508167 TMED8Q6PL24 325 aaPredicted RBP13.01□□□□□ -0.33
PROM1-207ENST00000508167 DCPSQ96C86 337 aaKnown RBP13.01□□□□□ -0.33
PROM1-207ENST00000508167 INTS4Q96HW7 963 aaKnown RBP13.01□□□□□ -0.33
PROM1-207ENST00000508167 ZDHHC15Q96MV8 337 aa13.01□□□□□ -0.33
PROM1-207ENST00000508167 UPF3BQ9BZI7 483 aaKnown RBP13.01□□□□□ -0.33
PROM1-207ENST00000508167 LRRC37AA6NMS7 1700 aa13.01□□□□□ -0.33
PROM1-207ENST00000508167 DLEC1Q9Y238 1755 aa13.01□□□□□ -0.33
PROM1-207ENST00000508167 CDC42EP5Q6NZY7 148 aa13.01□□□□□ -0.33
PROM1-207ENST00000508167 RALYLQ86SE5 291 aaKnown RBP13.01□□□□□ -0.33
PROM1-207ENST00000508167 ZSWIM6Q9HCJ5 1215 aa13.01□□□□□ -0.33
PROM1-207ENST00000508167 TCRBV5S4A2TA0A5A2 114 aa13.01□□□□□ -0.33
PROM1-207ENST00000508167 USP17L12C9JPN9 530 aa13.01□□□□□ -0.33
PROM1-207ENST00000508167 USP17L21D6R901 530 aa13.01□□□□□ -0.33
PROM1-207ENST00000508167 CPA1P15085 419 aa13.01□□□□□ -0.33
PROM1-207ENST00000508167 TNFAIP1Q13829 316 aa13.01□□□□□ -0.33
PROM1-207ENST00000508167 TICAM2Q86XR7 235 aa13.01□□□□□ -0.33
PROM1-207ENST00000508167 IFNL3Q8IZI9 196 aa13.01□□□□□ -0.33
PROM1-207ENST00000508167 NAP1L2Q9ULW6 460 aaPredicted RBP13.01□□□□□ -0.33
PROM1-207ENST00000508167 SPDYE2BA6NHP3 402 aa13□□□□□ -0.33
PROM1-207ENST00000508167 IGSF3O75054 1194 aa13□□□□□ -0.33
PROM1-207ENST00000508167 SPDYE6P0CI01 402 aa13□□□□□ -0.33
PROM1-207ENST00000508167 EPHX2P34913 555 aa13□□□□□ -0.33
PROM1-207ENST00000508167 SULF1Q8IWU6 871 aa13□□□□□ -0.33
PROM1-207ENST00000508167 BRPF3Q9ULD4 1205 aa13□□□□□ -0.33
PROM1-207ENST00000508167 SNED1Q8TER0 1413 aa13□□□□□ -0.33
PROM1-207ENST00000508167 TSGA10IPQ3SY00 556 aa13□□□□□ -0.33
PROM1-207ENST00000508167 RRAGCQ9HB90 399 aa13□□□□□ -0.33
PROM1-207ENST00000508167 MKNK2Q9HBH9 465 aa13□□□□□ -0.33
PROM1-207ENST00000508167 ADARB2Q9NS39 739 aaKnown RBP13□□□□□ -0.33
PROM1-207ENST00000508167 WNT10BO00744 389 aa13□□□□□ -0.33
PROM1-207ENST00000508167 ZNF384Q8TF68 577 aa13□□□□□ -0.33
PROM1-207ENST00000508167 CWC22Q9HCG8 908 aaKnown RBP13□□□□□ -0.33
PROM1-207ENST00000508167 ST18O60284 1047 aa12.99□□□□□ -0.33
PROM1-207ENST00000508167 FGAP02671 866 aa12.99□□□□□ -0.33
PROM1-207ENST00000508167 ANGEL2Q5VTE6 544 aaKnown RBP12.99□□□□□ -0.33
PROM1-207ENST00000508167 APOBEC3HQ6NTF7 200 aaKnown RBP12.99□□□□□ -0.33
PROM1-207ENST00000508167 ATP8A2Q9NTI2 1148 aa12.99□□□□□ -0.33
PROM1-207ENST00000508167 ZNF70Q9UC06 446 aaPredicted RBP12.99□□□□□ -0.33
PROM1-207ENST00000508167 AK2P54819 239 aa12.99□□□□□ -0.33
PROM1-207ENST00000508167 TTLL12Q14166 644 aaPredicted RBP12.99□□□□□ -0.33
PROM1-207ENST00000508167 TTC6Q86TZ1 520 aa12.99□□□□□ -0.33
PROM1-207ENST00000508167 GPT2Q8TD30 523 aa12.99□□□□□ -0.33
PROM1-207ENST00000508167 GGA3Q9NZ52 723 aa12.99□□□□□ -0.33
PROM1-207ENST00000508167 VEGFAP15692 232 aaPredicted RBP12.99□□□□□ -0.33
PROM1-207ENST00000508167 FAM163AQ96GL9 167 aaPredicted RBP12.99□□□□□ -0.33
PROM1-207ENST00000508167 GMLQ99445 158 aa12.99□□□□□ -0.33
PROM1-207ENST00000508167 RIOK1Q9BRS2 568 aaKnown RBP12.99□□□□□ -0.33
PROM1-207ENST00000508167 DSCC1Q9BVC3 393 aa12.99□□□□□ -0.33
PROM1-207ENST00000508167 GPBP1L1Q9HC44 474 aaPredicted RBP12.99□□□□□ -0.33
PROM1-207ENST00000508167 DDX11L8A8MPP1 907 aa12.98□□□□□ -0.33
PROM1-207ENST00000508167 TM6SF1Q9BZW5 370 aa12.98□□□□□ -0.33
PROM1-207ENST00000508167 ZNF408Q9H9D4 720 aa12.98□□□□□ -0.33
PROM1-207ENST00000508167 XRCC6P12956 609 aaKnown RBP eCLIP12.98□□□□□ -0.33
PROM1-207ENST00000508167 PPP4CP60510 307 aa12.98□□□□□ -0.33
PROM1-207ENST00000508167 IL27Q8NEV9 243 aa12.98□□□□□ -0.33
PROM1-207ENST00000508167 TRPM4Q8TD43 1214 aa12.98□□□□□ -0.33
PROM1-207ENST00000508167 CYP2D7A0A087X1C5 515 aa12.98□□□□□ -0.33
PROM1-207ENST00000508167 NFIAQ12857 509 aa12.98□□□□□ -0.33
PROM1-207ENST00000508167 PRKG1Q13976 671 aa12.98□□□□□ -0.33
PROM1-207ENST00000508167 TIAM2Q8IVF5 1701 aa12.98□□□□□ -0.33
PROM1-207ENST00000508167 DCP1AQ9NPI6 582 aaPredicted RBP12.98□□□□□ -0.33
PROM1-207ENST00000508167 ISY1Q9ULR0 285 aaKnown RBP12.98□□□□□ -0.33
PROM1-207ENST00000508167 GAKO14976 1311 aa12.98□□□□□ -0.33
PROM1-207ENST00000508167 GSG1L2A8MUP6 293 aa12.97□□□□□ -0.33
PROM1-207ENST00000508167 ALDH8A1Q9H2A2 487 aaPredicted RBP12.97□□□□□ -0.33
PROM1-207ENST00000508167 ZC3H4Q9UPT8 1303 aaKnown RBP12.97□□□□□ -0.33
PROM1-207ENST00000508167 MPHOSPH10O00566 681 aaKnown RBP12.97□□□□□ -0.33
PROM1-207ENST00000508167 RANBP6O60518 1105 aaKnown RBP12.97□□□□□ -0.33
PROM1-207ENST00000508167 EGFRP00533 1210 aa12.97□□□□□ -0.33
PROM1-207ENST00000508167 MRIQ9BWK5 157 aa12.97□□□□□ -0.33
PROM1-207ENST00000508167 KIAA1551Q9HCM1 1747 aa12.97□□□□□ -0.33
PROM1-207ENST00000508167 SLC27A2O14975 620 aa12.97□□□□□ -0.33
PROM1-207ENST00000508167 CTDSPL2Q05D32 466 aa12.97□□□□□ -0.33
PROM1-207ENST00000508167 PDE4BQ07343 736 aa12.97□□□□□ -0.33
PROM1-207ENST00000508167 MFSD6Q6ZSS7 791 aa12.97□□□□□ -0.33
PROM1-207ENST00000508167 NOL8Q76FK4 1167 aaKnown RBP12.97□□□□□ -0.33
PROM1-207ENST00000508167 ZNF444Q8N0Y2 327 aaPredicted RBP12.97□□□□□ -0.33
PROM1-207ENST00000508167 CSRNP1Q96S65 589 aa12.97□□□□□ -0.33
PROM1-207ENST00000508167 ZNF287Q9HBT7 754 aa12.97□□□□□ -0.33
PROM1-207ENST00000508167 RAD21O60216 631 aa12.97□□□□□ -0.33
PROM1-207ENST00000508167 MCM2P49736 904 aa12.97□□□□□ -0.33
PROM1-207ENST00000508167 MMP14P50281 582 aa12.97□□□□□ -0.33
PROM1-207ENST00000508167 CREB3L3Q68CJ9 461 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms