RNA–Protein interactions for RNA: ENST00000508132.1

CDH6-204, Transcript of cadherin 6, humanhuman

TSL 2

Gene CDH6, Length 678 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-204ENST00000508132 RNF135Q8IUD6 432 aa9.96□□□□□ -0.82
CDH6-204ENST00000508132 AEBP1Q8IUX7 1158 aa9.96□□□□□ -0.82
CDH6-204ENST00000508132 WDR63Q8IWG1 891 aa9.96□□□□□ -0.82
CDH6-204ENST00000508132 SMARCC1Q92922 1105 aaPredicted RBP9.96□□□□□ -0.82
CDH6-204ENST00000508132 NBPF4Q96M43 638 aa9.96□□□□□ -0.82
CDH6-204ENST00000508132 CRISPLD1Q9H336 500 aa9.96□□□□□ -0.82
CDH6-204ENST00000508132 SRP68Q9UHB9 627 aaKnown RBP9.96□□□□□ -0.82
CDH6-204ENST00000508132 ASAP1Q9ULH1 1129 aa9.96□□□□□ -0.82
CDH6-204ENST00000508132 CACNA1SQ13698 1873 aa9.96□□□□□ -0.82
CDH6-204ENST00000508132 E9PSI1 815 aa9.95□□□□□ -0.82
CDH6-204ENST00000508132 AOC2O75106 756 aa9.95□□□□□ -0.82
CDH6-204ENST00000508132 VAC14Q08AM6 782 aa9.95□□□□□ -0.82
CDH6-204ENST00000508132 NFE2L2Q16236 605 aa9.95□□□□□ -0.82
CDH6-204ENST00000508132 HABP4Q5JVS0 413 aaKnown RBP9.95□□□□□ -0.82
CDH6-204ENST00000508132 TRAPPC3LQ5T215 181 aa9.95□□□□□ -0.82
CDH6-204ENST00000508132 CYP4F22Q6NT55 531 aa9.95□□□□□ -0.82
CDH6-204ENST00000508132 TRMT2AQ8IZ69 625 aaKnown RBP9.95□□□□□ -0.82
CDH6-204ENST00000508132 USP3Q9Y6I4 520 aa9.95□□□□□ -0.82
CDH6-204ENST00000508132 KDRP35968 1356 aa9.95□□□□□ -0.82
CDH6-204ENST00000508132 NRXN2Q9P2S2 1712 aa9.95□□□□□ -0.82
CDH6-204ENST00000508132 COL11A2P13942 1736 aaPredicted RBP9.94□□□□□ -0.82
CDH6-204ENST00000508132 NEURL1BA8MQ27 555 aa9.94□□□□□ -0.82
CDH6-204ENST00000508132 GRM1Q13255 1194 aa9.94□□□□□ -0.82
CDH6-204ENST00000508132 DUSP27Q5VZP5 1158 aa9.94□□□□□ -0.82
CDH6-204ENST00000508132 LDHDQ86WU2 507 aa9.94□□□□□ -0.82
CDH6-204ENST00000508132 CAPNS2Q96L46 248 aa9.94□□□□□ -0.82
CDH6-204ENST00000508132 ZCCHC2Q9C0B9 1178 aaKnown RBP9.94□□□□□ -0.82
CDH6-204ENST00000508132 ANKRD31Q8N7Z5 1873 aa9.93□□□□□ -0.82
CDH6-204ENST00000508132 TRPM7Q96QT4 1865 aa9.93□□□□□ -0.82
CDH6-204ENST00000508132 ZNF831Q5JPB2 1677 aa9.93□□□□□ -0.82
CDH6-204ENST00000508132 NEFLP07196 543 aa9.93□□□□□ -0.82
CDH6-204ENST00000508132 EPXP11678 715 aa9.93□□□□□ -0.82
CDH6-204ENST00000508132 GDF10P55107 478 aa9.93□□□□□ -0.82
CDH6-204ENST00000508132 USP4Q13107 963 aa9.93□□□□□ -0.82
CDH6-204ENST00000508132 SLFNL1Q499Z3 407 aa9.93□□□□□ -0.82
CDH6-204ENST00000508132 TBC1D9Q6ZT07 1266 aa9.93□□□□□ -0.82
CDH6-204ENST00000508132 BTBD6Q96KE9 485 aa9.93□□□□□ -0.82
CDH6-204ENST00000508132 TAF1DQ9H5J8 278 aaPredicted RBP9.93□□□□□ -0.82
CDH6-204ENST00000508132 KLF15Q9UIH9 416 aa9.93□□□□□ -0.82
CDH6-204ENST00000508132 RTCBQ9Y3I0 505 aaKnown RBP9.93□□□□□ -0.82
CDH6-204ENST00000508132 CARMIL3Q8ND23 1372 aa9.92□□□□□ -0.82
CDH6-204ENST00000508132 PCDH11XQ9BZA7 1347 aa9.92□□□□□ -0.82
CDH6-204ENST00000508132 PCDH11YQ9BZA8 1340 aa9.92□□□□□ -0.82
CDH6-204ENST00000508132 DCDC2BA2VCK2 349 aa9.92□□□□□ -0.82
CDH6-204ENST00000508132 POLRMTO00411 1230 aaKnown RBP9.92□□□□□ -0.82
CDH6-204ENST00000508132 DLL1O00548 723 aa9.92□□□□□ -0.82
CDH6-204ENST00000508132 DGKGP49619 791 aa9.92□□□□□ -0.82
CDH6-204ENST00000508132 MAP1SQ66K74 1059 aaPredicted RBP9.92□□□□□ -0.82
CDH6-204ENST00000508132 ZNF295-AS1Q8N0V1 137 aa9.92□□□□□ -0.82
CDH6-204ENST00000508132 GPR101Q96P66 508 aaPredicted RBP9.92□□□□□ -0.82
CDH6-204ENST00000508132 RCAN3Q9UKA8 241 aa9.92□□□□□ -0.82
CDH6-204ENST00000508132 ABT1Q9ULW3 272 aaKnown RBP9.92□□□□□ -0.82
CDH6-204ENST00000508132 TRIOBPQ9H2D6 2365 aa9.92□□□□□ -0.82
CDH6-204ENST00000508132 CEP290O15078 2479 aa9.91□□□□□ -0.82
CDH6-204ENST00000508132 IL16Q14005 1332 aa9.91□□□□□ -0.82
CDH6-204ENST00000508132 C1QTNF9BB2RNN3 333 aa9.91□□□□□ -0.82
CDH6-204ENST00000508132 APBB1O00213 710 aa9.91□□□□□ -0.82
CDH6-204ENST00000508132 INHAP05111 366 aa9.91□□□□□ -0.82
CDH6-204ENST00000508132 CD33P20138 364 aa9.91□□□□□ -0.82
CDH6-204ENST00000508132 FXR1P51114 621 aaKnown RBP eCLIP9.91□□□□□ -0.82
CDH6-204ENST00000508132 LMOD3Q0VAK6 560 aa9.91□□□□□ -0.82
CDH6-204ENST00000508132 EAPPQ56P03 285 aaPredicted RBP9.91□□□□□ -0.82
CDH6-204ENST00000508132 MYH16Q9H6N6 1097 aa9.91□□□□□ -0.82
CDH6-204ENST00000508132 ATG3Q9NT62 314 aa9.91□□□□□ -0.82
CDH6-204ENST00000508132 SERTAD1Q9UHV2 236 aa9.91□□□□□ -0.82
CDH6-204ENST00000508132 RFC4P35249 363 aa9.9□□□□□ -0.82
CDH6-204ENST00000508132 CHRNA4P43681 627 aa9.9□□□□□ -0.82
CDH6-204ENST00000508132 CALD1Q05682 793 aaKnown RBP9.9□□□□□ -0.82
CDH6-204ENST00000508132 CD163Q86VB7 1156 aa9.9□□□□□ -0.82
CDH6-204ENST00000508132 BRCA2P51587 3418 aa9.9□□□□□ -0.82
CDH6-204ENST00000508132 SCN11AQ9UI33 1791 aa9.9□□□□□ -0.82
CDH6-204ENST00000508132 DLG5Q8TDM6 1919 aa9.9□□□□□ -0.83
CDH6-204ENST00000508132 SLX4Q8IY92 1834 aa9.89□□□□□ -0.83
CDH6-204ENST00000508132 ARAFP10398 606 aa9.89□□□□□ -0.83
CDH6-204ENST00000508132 HMGB2P26583 209 aaKnown RBP9.89□□□□□ -0.83
CDH6-204ENST00000508132 MTHFSDQ2M296 383 aaKnown RBP9.89□□□□□ -0.83
CDH6-204ENST00000508132 FCHSD1Q86WN1 690 aa9.89□□□□□ -0.83
CDH6-204ENST00000508132 CNTROBQ8N137 903 aa9.89□□□□□ -0.83
CDH6-204ENST00000508132 GDPD2Q9HCC8 539 aa9.89□□□□□ -0.83
CDH6-204ENST00000508132 PCDHGC4Q9Y5F7 938 aa9.89□□□□□ -0.83
CDH6-204ENST00000508132 TJP1Q07157 1748 aa9.89□□□□□ -0.83
CDH6-204ENST00000508132 RANBP2P49792 3224 aaKnown RBP9.89□□□□□ -0.83
CDH6-204ENST00000508132 RNF123Q5XPI4 1314 aa9.88□□□□□ -0.83
CDH6-204ENST00000508132 USP42Q9H9J4 1324 aaKnown RBP9.88□□□□□ -0.83
CDH6-204ENST00000508132 TMEM229AB2RXF0 380 aa9.88□□□□□ -0.83
CDH6-204ENST00000508132 GNB5O14775 395 aa9.88□□□□□ -0.83
CDH6-204ENST00000508132 ATXN7O15265 892 aaPredicted RBP9.88□□□□□ -0.83
CDH6-204ENST00000508132 RPS6KA4O75676 772 aa9.88□□□□□ -0.83
CDH6-204ENST00000508132 MAPTP10636 758 aaKnown RBP9.88□□□□□ -0.83
CDH6-204ENST00000508132 TM4SF1P30408 202 aa9.88□□□□□ -0.83
CDH6-204ENST00000508132 TTLL6Q8N841 843 aa9.88□□□□□ -0.83
CDH6-204ENST00000508132 GAS2L2Q8NHY3 880 aa9.88□□□□□ -0.83
CDH6-204ENST00000508132 RAPGEF4Q8WZA2 1011 aa9.88□□□□□ -0.83
CDH6-204ENST00000508132 ZIC5Q96T25 663 aa9.88□□□□□ -0.83
CDH6-204ENST00000508132 CNTNAP4Q9C0A0 1308 aa9.87□□□□□ -0.83
CDH6-204ENST00000508132 ZNF541Q9H0D2 1346 aa9.87□□□□□ -0.83
CDH6-204ENST00000508132 A0A1W2PNR3 127 aa9.87□□□□□ -0.83
CDH6-204ENST00000508132 HTATSF1O43719 755 aaKnown RBP9.87□□□□□ -0.83
CDH6-204ENST00000508132 TATP17735 454 aaPredicted RBP9.87□□□□□ -0.83
CDH6-204ENST00000508132 ITGB7P26010 798 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 754.3 ms