RNA–Protein interactions for RNA: ENST00000507046.5

DDR1-259, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-259ENST00000507046 FAM155AB1AL88 458 aaPredicted RBP24.06■■□□□ 1.44
DDR1-259ENST00000507046 AOC2O75106 756 aa24.06■■□□□ 1.44
DDR1-259ENST00000507046 ANKRD13AQ8IZ07 590 aa24.06■■□□□ 1.44
DDR1-259ENST00000507046 MIGA1Q8NAN2 632 aa24.06■■□□□ 1.44
DDR1-259ENST00000507046 CSRNP1Q96S65 589 aa24.06■■□□□ 1.44
DDR1-259ENST00000507046 LNPKQ9C0E8 428 aa24.06■■□□□ 1.44
DDR1-259ENST00000507046 ZSCAN25Q6NSZ9 544 aa24.05■■□□□ 1.44
DDR1-259ENST00000507046 ZFPM1Q8IX07 1006 aa24.05■■□□□ 1.44
DDR1-259ENST00000507046 COL2A1P02458 1487 aaPredicted RBP24.05■■□□□ 1.44
DDR1-259ENST00000507046 SALL3Q9BXA9 1300 aa24.05■■□□□ 1.44
DDR1-259ENST00000507046 ZNF532Q9HCE3 1301 aa24.05■■□□□ 1.44
DDR1-259ENST00000507046 OTOFQ9HC10 1997 aa24.04■■□□□ 1.44
DDR1-259ENST00000507046 DYNLL1P63167 89 aaKnown RBP24.04■■□□□ 1.44
DDR1-259ENST00000507046 MAP2K1Q02750 393 aaPredicted RBP24.04■■□□□ 1.44
DDR1-259ENST00000507046 CHD1LQ86WJ1 897 aa24.04■■□□□ 1.44
DDR1-259ENST00000507046 PI4K2BQ8TCG2 481 aa24.04■■□□□ 1.44
DDR1-259ENST00000507046 ZNF341Q9BYN7 854 aa24.04■■□□□ 1.44
DDR1-259ENST00000507046 OSBPL5Q9H0X9 879 aaPredicted RBP24.04■■□□□ 1.44
DDR1-259ENST00000507046 ATRNL1Q5VV63 1379 aa24.03■■□□□ 1.44
DDR1-259ENST00000507046 ADD2P35612 726 aa24.03■■□□□ 1.44
DDR1-259ENST00000507046 NUCB1Q02818 461 aa24.03■■□□□ 1.44
DDR1-259ENST00000507046 TGFBRAP1Q8WUH2 860 aa24.03■■□□□ 1.44
DDR1-259ENST00000507046 SLC10A4Q96EP9 437 aa24.03■■□□□ 1.44
DDR1-259ENST00000507046 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.03■■□□□ 1.44
DDR1-259ENST00000507046 CSADQ9Y600 493 aa24.03■■□□□ 1.44
DDR1-259ENST00000507046 MYH7P12883 1935 aa24.03■■□□□ 1.44
DDR1-259ENST00000507046 MAGEB6P1A0A0J9YX57 407 aa24.02■■□□□ 1.44
DDR1-259ENST00000507046 MAP3K9P80192 1104 aa24.02■■□□□ 1.44
DDR1-259ENST00000507046 MIGA2Q7L4E1 593 aa24.02■■□□□ 1.44
DDR1-259ENST00000507046 KBTBD3Q8NAB2 608 aa24.02■■□□□ 1.44
DDR1-259ENST00000507046 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.02■■□□□ 1.44
DDR1-259ENST00000507046 WRNIP1Q96S55 665 aa24.02■■□□□ 1.44
DDR1-259ENST00000507046 FOCADQ5VW36 1801 aa24.02■■□□□ 1.44
DDR1-259ENST00000507046 FLT1P17948 1338 aa24.02■■□□□ 1.44
DDR1-259ENST00000507046 CDK5RAP2Q96SN8 1893 aa24.01■■□□□ 1.43
DDR1-259ENST00000507046 TCRBV5S4A2TA0A5A2 114 aa24.01■■□□□ 1.43
DDR1-259ENST00000507046 DDTLA6NHG4 134 aaPredicted RBP24.01■■□□□ 1.43
DDR1-259ENST00000507046 USP5P45974 858 aa24.01■■□□□ 1.43
DDR1-259ENST00000507046 PDE1AP54750 535 aa24.01■■□□□ 1.43
DDR1-259ENST00000507046 LRRFIP1Q32MZ4 808 aaKnown RBP24.01■■□□□ 1.43
DDR1-259ENST00000507046 SH3BP5LQ7L8J4 393 aa24.01■■□□□ 1.43
DDR1-259ENST00000507046 MAPKAPK5Q8IW41 473 aa24.01■■□□□ 1.43
DDR1-259ENST00000507046 AIDAQ96BJ3 306 aa24.01■■□□□ 1.43
DDR1-259ENST00000507046 CLMNQ96JQ2 1002 aa24.01■■□□□ 1.43
DDR1-259ENST00000507046 STAP2Q9UGK3 403 aa24.01■■□□□ 1.43
DDR1-259ENST00000507046 CENPBP07199 599 aaPredicted RBP24■■□□□ 1.43
DDR1-259ENST00000507046 HSPA1AP0DMV8 641 aaKnown RBP24■■□□□ 1.43
DDR1-259ENST00000507046 HSPA1BP0DMV9 641 aaKnown RBP24■■□□□ 1.43
DDR1-259ENST00000507046 UBE3CQ15386 1083 aa24■■□□□ 1.43
DDR1-259ENST00000507046 RIOK1Q9BRS2 568 aaKnown RBP24■■□□□ 1.43
DDR1-259ENST00000507046 BEGAINQ9BUH8 593 aa24■■□□□ 1.43
DDR1-259ENST00000507046 DHX36Q9H2U1 1008 aaKnown RBP24■■□□□ 1.43
DDR1-259ENST00000507046 KIF23Q02241 960 aaPredicted RBP23.99■■□□□ 1.43
DDR1-259ENST00000507046 VGLL4Q14135 290 aa23.99■■□□□ 1.43
DDR1-259ENST00000507046 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.99■■□□□ 1.43
DDR1-259ENST00000507046 CRNKL1Q9BZJ0 848 aaKnown RBP23.99■■□□□ 1.43
DDR1-259ENST00000507046 ZBTB48P10074 688 aaPredicted RBP23.98■■□□□ 1.43
DDR1-259ENST00000507046 MKRN3Q13064 507 aaKnown RBP23.98■■□□□ 1.43
DDR1-259ENST00000507046 SPRYD7Q5W111 196 aa23.98■■□□□ 1.43
DDR1-259ENST00000507046 REM2Q8IYK8 340 aaPredicted RBP23.98■■□□□ 1.43
DDR1-259ENST00000507046 WNK4Q96J92 1243 aa23.98■■□□□ 1.43
DDR1-259ENST00000507046 ZIC5Q96T25 663 aa23.98■■□□□ 1.43
DDR1-259ENST00000507046 ELP3Q9H9T3 547 aa23.98■■□□□ 1.43
DDR1-259ENST00000507046 WBP1LQ9NX94 342 aa23.98■■□□□ 1.43
DDR1-259ENST00000507046 ZFYP08048 801 aaPredicted RBP23.97■■□□□ 1.43
DDR1-259ENST00000507046 FSD1Q9BTV5 496 aa23.97■■□□□ 1.43
DDR1-259ENST00000507046 MBD4O95243 580 aa23.96■■□□□ 1.43
DDR1-259ENST00000507046 NEFLP07196 543 aa23.96■■□□□ 1.43
DDR1-259ENST00000507046 LCORLQ8N3X6 602 aa23.96■■□□□ 1.43
DDR1-259ENST00000507046 ZNF112Q9UJU3 913 aa23.96■■□□□ 1.43
DDR1-259ENST00000507046 TBC1D12O60347 775 aa23.95■■□□□ 1.42
DDR1-259ENST00000507046 HLA-DOAP06340 250 aa23.95■■□□□ 1.42
DDR1-259ENST00000507046 SREBF2Q12772 1141 aa23.95■■□□□ 1.42
DDR1-259ENST00000507046 SLFNL1Q499Z3 407 aa23.95■■□□□ 1.42
DDR1-259ENST00000507046 ZKSCAN4Q969J2 545 aaPredicted RBP23.95■■□□□ 1.42
DDR1-259ENST00000507046 OPTNQ96CV9 577 aa23.95■■□□□ 1.42
DDR1-259ENST00000507046 ARMT1Q9H993 441 aa23.95■■□□□ 1.42
DDR1-259ENST00000507046 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.95■■□□□ 1.42
DDR1-259ENST00000507046 PI4KBQ9UBF8 816 aa23.95■■□□□ 1.42
DDR1-259ENST00000507046 SAP30BPQ9UHR5 308 aaKnown RBP23.95■■□□□ 1.42
DDR1-259ENST00000507046 NAV1Q8NEY1 1877 aa23.94■■□□□ 1.42
DDR1-259ENST00000507046 RNF113AO15541 343 aaKnown RBP23.94■■□□□ 1.42
DDR1-259ENST00000507046 INPP5BP32019 993 aa23.94■■□□□ 1.42
DDR1-259ENST00000507046 MAP3K10Q02779 954 aa23.94■■□□□ 1.42
DDR1-259ENST00000507046 APPBP2Q92624 585 aa23.94■■□□□ 1.42
DDR1-259ENST00000507046 EVI5LQ96CN4 794 aa23.94■■□□□ 1.42
DDR1-259ENST00000507046 TRIM34Q9BYJ4 488 aa23.94■■□□□ 1.42
DDR1-259ENST00000507046 HERC5Q9UII4 1024 aaKnown RBP23.94■■□□□ 1.42
DDR1-259ENST00000507046 PALD1Q9ULE6 856 aa23.94■■□□□ 1.42
DDR1-259ENST00000507046 SNCAIPQ9Y6H5 919 aa23.94■■□□□ 1.42
DDR1-259ENST00000507046 SPDYE5A6NIY4 337 aa23.93■■□□□ 1.42
DDR1-259ENST00000507046 CA12O43570 354 aa23.93■■□□□ 1.42
DDR1-259ENST00000507046 CHGBP05060 677 aa23.93■■□□□ 1.42
DDR1-259ENST00000507046 NOL9Q5SY16 702 aaKnown RBP23.93■■□□□ 1.42
DDR1-259ENST00000507046 MYH1P12882 1939 aa23.92■■□□□ 1.42
DDR1-259ENST00000507046 MANSC4A6NHS7 340 aaPredicted RBP23.92■■□□□ 1.42
DDR1-259ENST00000507046 ERO1BQ86YB8 467 aa23.92■■□□□ 1.42
DDR1-259ENST00000507046 PLEKHM2Q8IWE5 1019 aa23.92■■□□□ 1.42
DDR1-259ENST00000507046 CRACR2BQ8N4Y2 399 aaPredicted RBP23.92■■□□□ 1.42
DDR1-259ENST00000507046 OTUD5Q96G74 571 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms