RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 MAP3K10Q02779 954 aa17.72■□□□□ 0.43
HMGCS1-203ENST00000507004 MECOMQ03112 1051 aa17.72■□□□□ 0.43
HMGCS1-203ENST00000507004 ANKRD23Q86SG2 305 aa17.72■□□□□ 0.43
HMGCS1-203ENST00000507004 FAM43AQ8N2R8 423 aa17.72■□□□□ 0.43
HMGCS1-203ENST00000507004 PICK1Q9NRD5 415 aa17.72■□□□□ 0.43
HMGCS1-203ENST00000507004 TNNQ9UQP3 1299 aa17.72■□□□□ 0.43
HMGCS1-203ENST00000507004 PTPN22Q9Y2R2 807 aa17.72■□□□□ 0.43
HMGCS1-203ENST00000507004 ZBTB7BO15156 539 aaPredicted RBP17.71■□□□□ 0.43
HMGCS1-203ENST00000507004 TBC1D12O60347 775 aa17.71■□□□□ 0.43
HMGCS1-203ENST00000507004 PLCG2P16885 1265 aa17.71■□□□□ 0.43
HMGCS1-203ENST00000507004 PRMT2P55345 433 aa17.71■□□□□ 0.43
HMGCS1-203ENST00000507004 TNNI3KQ59H18 835 aa17.71■□□□□ 0.43
HMGCS1-203ENST00000507004 TTC39AQ5SRH9 613 aa17.71■□□□□ 0.43
HMGCS1-203ENST00000507004 TMED8Q6PL24 325 aaPredicted RBP17.71■□□□□ 0.43
HMGCS1-203ENST00000507004 CD99L2Q8TCZ2 262 aa17.71■□□□□ 0.43
HMGCS1-203ENST00000507004 NSUN4Q96CB9 384 aaKnown RBP17.71■□□□□ 0.43
HMGCS1-203ENST00000507004 CHMP4BQ9H444 224 aaKnown RBP17.71■□□□□ 0.43
HMGCS1-203ENST00000507004 RAI14Q9P0K7 980 aa17.71■□□□□ 0.43
HMGCS1-203ENST00000507004 LRP2BPQ9P2M1 347 aa17.71■□□□□ 0.43
HMGCS1-203ENST00000507004 FPGT-TNNI3KV9GXZ4 949 aa17.71■□□□□ 0.43
HMGCS1-203ENST00000507004 ATRNL1Q5VV63 1379 aa17.7■□□□□ 0.42
HMGCS1-203ENST00000507004 BTBD19C9JJ37 291 aa17.7■□□□□ 0.42
HMGCS1-203ENST00000507004 BAG3O95817 575 aa17.7■□□□□ 0.42
HMGCS1-203ENST00000507004 HSP90AB4PQ58FF6 505 aa17.7■□□□□ 0.42
HMGCS1-203ENST00000507004 FASTKD5Q7L8L6 764 aaKnown RBP17.7■□□□□ 0.42
HMGCS1-203ENST00000507004 ERC1Q8IUD2 1116 aa17.7■□□□□ 0.42
HMGCS1-203ENST00000507004 SCYL3Q8IZE3 742 aa17.7■□□□□ 0.42
HMGCS1-203ENST00000507004 COL2A1P02458 1487 aaPredicted RBP17.69■□□□□ 0.42
HMGCS1-203ENST00000507004 CTNND1O60716 968 aaKnown RBP17.69■□□□□ 0.42
HMGCS1-203ENST00000507004 NBPF11Q86T75 865 aa17.69■□□□□ 0.42
HMGCS1-203ENST00000507004 CERS3Q8IU89 383 aa17.69■□□□□ 0.42
HMGCS1-203ENST00000507004 TBC1D2Q9BYX2 928 aa17.69■□□□□ 0.42
HMGCS1-203ENST00000507004 MCAMP43121 646 aa17.68■□□□□ 0.42
HMGCS1-203ENST00000507004 RHBDL3P58872 404 aa17.68■□□□□ 0.42
HMGCS1-203ENST00000507004 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.68■□□□□ 0.42
HMGCS1-203ENST00000507004 ARMC5Q96C12 935 aa17.68■□□□□ 0.42
HMGCS1-203ENST00000507004 PARK7Q99497 189 aaKnown RBP17.68■□□□□ 0.42
HMGCS1-203ENST00000507004 DOCK2Q92608 1830 aa17.68■□□□□ 0.42
HMGCS1-203ENST00000507004 PHF20L1A8MW92 1017 aa17.67■□□□□ 0.42
HMGCS1-203ENST00000507004 HOXD10P28358 340 aa17.67■□□□□ 0.42
HMGCS1-203ENST00000507004 PICALMQ13492 652 aa17.67■□□□□ 0.42
HMGCS1-203ENST00000507004 ZFPM1Q8IX07 1006 aa17.67■□□□□ 0.42
HMGCS1-203ENST00000507004 DHX36Q9H2U1 1008 aaKnown RBP17.67■□□□□ 0.42
HMGCS1-203ENST00000507004 SLC45A1Q9Y2W3 748 aa17.67■□□□□ 0.42
HMGCS1-203ENST00000507004 PDHXO00330 501 aa17.66■□□□□ 0.42
HMGCS1-203ENST00000507004 LACTBP83111 547 aaPredicted RBP17.66■□□□□ 0.42
HMGCS1-203ENST00000507004 NAA16Q6N069 864 aaPredicted RBP17.66■□□□□ 0.42
HMGCS1-203ENST00000507004 DBNDD2Q9BQY9 259 aa17.66■□□□□ 0.42
HMGCS1-203ENST00000507004 OSBPL5Q9H0X9 879 aaPredicted RBP17.66■□□□□ 0.42
HMGCS1-203ENST00000507004 HERC5Q9UII4 1024 aaKnown RBP17.66■□□□□ 0.42
HMGCS1-203ENST00000507004 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.66■□□□□ 0.42
HMGCS1-203ENST00000507004 PDE4DIPQ5VU43 2346 aa17.65■□□□□ 0.42
HMGCS1-203ENST00000507004 DDTLA6NHG4 134 aaPredicted RBP17.65■□□□□ 0.42
HMGCS1-203ENST00000507004 RLBP1P12271 317 aa17.65■□□□□ 0.42
HMGCS1-203ENST00000507004 PTPRAP18433 802 aa17.65■□□□□ 0.42
HMGCS1-203ENST00000507004 PPP4CP60510 307 aa17.65■□□□□ 0.42
HMGCS1-203ENST00000507004 CEP85Q6P2H3 762 aa17.65■□□□□ 0.42
HMGCS1-203ENST00000507004 C17orf99Q6UX52 265 aa17.65■□□□□ 0.42
HMGCS1-203ENST00000507004 TBC1D9Q6ZT07 1266 aa17.65■□□□□ 0.42
HMGCS1-203ENST00000507004 SH3BP5LQ7L8J4 393 aa17.65■□□□□ 0.42
HMGCS1-203ENST00000507004 TEX11Q8IYF3 940 aa17.65■□□□□ 0.42
HMGCS1-203ENST00000507004 DDX4Q9NQI0 724 aaKnown RBP17.65■□□□□ 0.42
HMGCS1-203ENST00000507004 ZHX2Q9Y6X8 837 aa17.65■□□□□ 0.42
HMGCS1-203ENST00000507004 A0A0G2JLL6 359 aaPredicted RBP17.64■□□□□ 0.41
HMGCS1-203ENST00000507004 HMMRO75330 724 aa17.64■□□□□ 0.41
HMGCS1-203ENST00000507004 PI16Q6UXB8 463 aa17.64■□□□□ 0.41
HMGCS1-203ENST00000507004 PRRT2Q7Z6L0 340 aaPredicted RBP17.64■□□□□ 0.41
HMGCS1-203ENST00000507004 RPAP2Q8IXW5 612 aaPredicted RBP17.64■□□□□ 0.41
HMGCS1-203ENST00000507004 ZNF384Q8TF68 577 aa17.64■□□□□ 0.41
HMGCS1-203ENST00000507004 TMEM106CQ9BVX2 250 aa17.64■□□□□ 0.41
HMGCS1-203ENST00000507004 C1orf115Q9H7X2 142 aa17.64■□□□□ 0.41
HMGCS1-203ENST00000507004 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.64■□□□□ 0.41
HMGCS1-203ENST00000507004 PI4KBQ9UBF8 816 aa17.64■□□□□ 0.41
HMGCS1-203ENST00000507004 DDX19BQ9UMR2 479 aa17.64■□□□□ 0.41
HMGCS1-203ENST00000507004 SLC9C1Q4G0N8 1177 aa17.63■□□□□ 0.41
HMGCS1-203ENST00000507004 GINM1Q9NU53 330 aa17.63■□□□□ 0.41
HMGCS1-203ENST00000507004 AFG3L2Q9Y4W6 797 aa17.63■□□□□ 0.41
HMGCS1-203ENST00000507004 FOXP4Q8IVH2 680 aaPredicted RBP17.62■□□□□ 0.41
HMGCS1-203ENST00000507004 DBNLQ9UJU6 430 aaKnown RBP17.62■□□□□ 0.41
HMGCS1-203ENST00000507004 PNMA3Q9UL41 463 aa17.62■□□□□ 0.41
HMGCS1-203ENST00000507004 CYP2E1P05181 493 aaPredicted RBP17.61■□□□□ 0.41
HMGCS1-203ENST00000507004 PABPC4Q13310 644 aaKnown RBP eCLIP17.61■□□□□ 0.41
HMGCS1-203ENST00000507004 MOGSQ13724 837 aa17.61■□□□□ 0.41
HMGCS1-203ENST00000507004 PRPF38BQ5VTL8 546 aaKnown RBP17.61■□□□□ 0.41
HMGCS1-203ENST00000507004 AS3MTQ9HBK9 375 aa17.61■□□□□ 0.41
HMGCS1-203ENST00000507004 SNRKQ9NRH2 765 aa17.61■□□□□ 0.41
HMGCS1-203ENST00000507004 MAST2Q6P0Q8 1798 aa17.61■□□□□ 0.41
HMGCS1-203ENST00000507004 MAP3K12Q12852 859 aa17.6■□□□□ 0.41
HMGCS1-203ENST00000507004 GPAT2Q6NUI2 795 aa17.6■□□□□ 0.41
HMGCS1-203ENST00000507004 CLASRPQ8N2M8 674 aaKnown RBP17.6■□□□□ 0.41
HMGCS1-203ENST00000507004 PROCA1Q8NCQ7 364 aaPredicted RBP17.6■□□□□ 0.41
HMGCS1-203ENST00000507004 PANK1Q8TE04 598 aa17.6■□□□□ 0.41
HMGCS1-203ENST00000507004 EAF2Q96CJ1 260 aaPredicted RBP17.6■□□□□ 0.41
HMGCS1-203ENST00000507004 ZNF333Q96JL9 665 aa17.6■□□□□ 0.41
HMGCS1-203ENST00000507004 TRIM34Q9BYJ4 488 aa17.6■□□□□ 0.41
HMGCS1-203ENST00000507004 AATFQ9NY61 560 aaKnown RBP eCLIP17.6■□□□□ 0.411e-6■■■□□ 16.4
HMGCS1-203ENST00000507004 CPA4Q9UI42 421 aa17.6■□□□□ 0.41
HMGCS1-203ENST00000507004 PTCH2Q9Y6C5 1203 aa17.6■□□□□ 0.41
HMGCS1-203ENST00000507004 ADGRA2Q96PE1 1338 aa17.6■□□□□ 0.41
HMGCS1-203ENST00000507004 DOCK1Q14185 1865 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms