RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 SPRYD7Q5W111 196 aa24.09■■□□□ 1.45
SNX25-204ENST00000506896 MAGEB6Q8N7X4 407 aa24.09■■□□□ 1.45
SNX25-204ENST00000506896 FAM151AQ8WW52 585 aa24.09■■□□□ 1.45
SNX25-204ENST00000506896 SLC10A4Q96EP9 437 aa24.09■■□□□ 1.45
SNX25-204ENST00000506896 CLMNQ96JQ2 1002 aa24.09■■□□□ 1.45
SNX25-204ENST00000506896 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.09■■□□□ 1.45
SNX25-204ENST00000506896 ENTPD3O75355 529 aa24.08■■□□□ 1.45
SNX25-204ENST00000506896 NPM3O75607 178 aaKnown RBP24.08■■□□□ 1.45
SNX25-204ENST00000506896 GLRX3O76003 335 aaKnown RBP24.08■■□□□ 1.45
SNX25-204ENST00000506896 RHBDL3P58872 404 aa24.08■■□□□ 1.45
SNX25-204ENST00000506896 PPP4CP60510 307 aa24.08■■□□□ 1.45
SNX25-204ENST00000506896 CHD1LQ86WJ1 897 aa24.08■■□□□ 1.45
SNX25-204ENST00000506896 SALL3Q9BXA9 1300 aa24.08■■□□□ 1.44
SNX25-204ENST00000506896 RFX7Q2KHR2 1363 aa24.07■■□□□ 1.44
SNX25-204ENST00000506896 NFIAQ12857 509 aa24.07■■□□□ 1.44
SNX25-204ENST00000506896 SLC9C2Q5TAH2 1124 aa24.07■■□□□ 1.44
SNX25-204ENST00000506896 B4GALNT3Q6L9W6 998 aa24.07■■□□□ 1.44
SNX25-204ENST00000506896 OTUD7AQ8TE49 926 aaPredicted RBP24.07■■□□□ 1.44
SNX25-204ENST00000506896 OTOFQ9HC10 1997 aa24.07■■□□□ 1.44
SNX25-204ENST00000506896 LAMB1P07942 1786 aa24.06■■□□□ 1.44
SNX25-204ENST00000506896 WDHD1O75717 1129 aaPredicted RBP24.06■■□□□ 1.44
SNX25-204ENST00000506896 TRPA1O75762 1119 aa24.06■■□□□ 1.44
SNX25-204ENST00000506896 TSHZ3Q63HK5 1081 aa24.06■■□□□ 1.44
SNX25-204ENST00000506896 ADGRA1Q86SQ6 560 aa24.06■■□□□ 1.44
SNX25-204ENST00000506896 ANKRD13AQ8IZ07 590 aa24.06■■□□□ 1.44
SNX25-204ENST00000506896 EDC3Q96F86 508 aaKnown RBP24.06■■□□□ 1.44
SNX25-204ENST00000506896 LNPKQ9C0E8 428 aa24.06■■□□□ 1.44
SNX25-204ENST00000506896 AATFQ9NY61 560 aaKnown RBP eCLIP24.06■■□□□ 1.44
SNX25-204ENST00000506896 FAM198AQ9UFP1 575 aa24.06■■□□□ 1.44
SNX25-204ENST00000506896 STAP2Q9UGK3 403 aa24.06■■□□□ 1.44
SNX25-204ENST00000506896 PDE6AP16499 860 aa24.05■■□□□ 1.44
SNX25-204ENST00000506896 RGS3P49796 1198 aa24.05■■□□□ 1.44
SNX25-204ENST00000506896 TCP10Q12799 353 aa24.05■■□□□ 1.44
SNX25-204ENST00000506896 ZSCAN25Q6NSZ9 544 aa24.05■■□□□ 1.44
SNX25-204ENST00000506896 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.05■■□□□ 1.44
SNX25-204ENST00000506896 PI4K2BQ8TCG2 481 aa24.05■■□□□ 1.44
SNX25-204ENST00000506896 AK9Q5TCS8 1911 aa24.04■■□□□ 1.44
SNX25-204ENST00000506896 ZBTB48P10074 688 aaPredicted RBP24.04■■□□□ 1.44
SNX25-204ENST00000506896 MKRN3Q13064 507 aaKnown RBP24.04■■□□□ 1.44
SNX25-204ENST00000506896 TEX11Q8IYF3 940 aa24.04■■□□□ 1.44
SNX25-204ENST00000506896 WNK4Q96J92 1243 aa24.04■■□□□ 1.44
SNX25-204ENST00000506896 NEFLP07196 543 aa24.03■■□□□ 1.44
SNX25-204ENST00000506896 PDE1AP54750 535 aa24.03■■□□□ 1.44
SNX25-204ENST00000506896 MAP3K9P80192 1104 aa24.03■■□□□ 1.44
SNX25-204ENST00000506896 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.03■■□□□ 1.44
SNX25-204ENST00000506896 SH3RF3Q8TEJ3 882 aaPredicted RBP24.03■■□□□ 1.44
SNX25-204ENST00000506896 ADD2P35612 726 aa24.02■■□□□ 1.44
SNX25-204ENST00000506896 GJA5P36382 358 aa24.02■■□□□ 1.44
SNX25-204ENST00000506896 DCAF15Q66K64 600 aa24.02■■□□□ 1.44
SNX25-204ENST00000506896 KBTBD3Q8NAB2 608 aa24.02■■□□□ 1.44
SNX25-204ENST00000506896 ZNF532Q9HCE3 1301 aa24.02■■□□□ 1.44
SNX25-204ENST00000506896 TCRBV5S4A2TA0A5A2 114 aa24.01■■□□□ 1.43
SNX25-204ENST00000506896 INHBEP58166 350 aa24.01■■□□□ 1.43
SNX25-204ENST00000506896 SREBF2Q12772 1141 aa24.01■■□□□ 1.43
SNX25-204ENST00000506896 PICALMQ13492 652 aa24.01■■□□□ 1.43
SNX25-204ENST00000506896 UBE3CQ15386 1083 aa24.01■■□□□ 1.43
SNX25-204ENST00000506896 LRRFIP1Q32MZ4 808 aaKnown RBP24.01■■□□□ 1.43
SNX25-204ENST00000506896 ZFPM1Q8IX07 1006 aa24.01■■□□□ 1.43
SNX25-204ENST00000506896 DDX4Q9NQI0 724 aaKnown RBP24.01■■□□□ 1.43
SNX25-204ENST00000506896 COL2A1P02458 1487 aaPredicted RBP24■■□□□ 1.43
SNX25-204ENST00000506896 MANSC4A6NHS7 340 aaPredicted RBP24■■□□□ 1.43
SNX25-204ENST00000506896 ZSCAN29Q8IWY8 852 aaPredicted RBP24■■□□□ 1.43
SNX25-204ENST00000506896 MIGA1Q8NAN2 632 aa24■■□□□ 1.43
SNX25-204ENST00000506896 ATRNL1Q5VV63 1379 aa24■■□□□ 1.43
SNX25-204ENST00000506896 MAGEB6P1A0A0J9YX57 407 aa23.99■■□□□ 1.43
SNX25-204ENST00000506896 ZFYP08048 801 aaPredicted RBP23.99■■□□□ 1.43
SNX25-204ENST00000506896 VGLL4Q14135 290 aa23.99■■□□□ 1.43
SNX25-204ENST00000506896 ELP3Q9H9T3 547 aa23.99■■□□□ 1.43
SNX25-204ENST00000506896 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.99■■□□□ 1.43
SNX25-204ENST00000506896 MYH7P12883 1935 aa23.98■■□□□ 1.43
SNX25-204ENST00000506896 DYNLL1P63167 89 aaKnown RBP23.98■■□□□ 1.43
SNX25-204ENST00000506896 TGFBRAP1Q8WUH2 860 aa23.98■■□□□ 1.43
SNX25-204ENST00000506896 RIOK1Q9BRS2 568 aaKnown RBP23.98■■□□□ 1.43
SNX25-204ENST00000506896 CFHR5Q9BXR6 569 aa23.98■■□□□ 1.43
SNX25-204ENST00000506896 OSBPL5Q9H0X9 879 aaPredicted RBP23.98■■□□□ 1.43
SNX25-204ENST00000506896 DHX36Q9H2U1 1008 aaKnown RBP23.98■■□□□ 1.43
SNX25-204ENST00000506896 OSBPL3Q9H4L5 887 aa23.98■■□□□ 1.43
SNX25-204ENST00000506896 ZNF112Q9UJU3 913 aa23.98■■□□□ 1.43
SNX25-204ENST00000506896 MIGA2Q7L4E1 593 aa23.97■■□□□ 1.43
SNX25-204ENST00000506896 OPTNQ96CV9 577 aa23.97■■□□□ 1.43
SNX25-204ENST00000506896 ZNF341Q9BYN7 854 aa23.97■■□□□ 1.43
SNX25-204ENST00000506896 FLT1P17948 1338 aa23.96■■□□□ 1.43
SNX25-204ENST00000506896 TESPA1A2RU30 521 aaPredicted RBP23.96■■□□□ 1.43
SNX25-204ENST00000506896 DDTLA6NHG4 134 aaPredicted RBP23.96■■□□□ 1.43
SNX25-204ENST00000506896 SH3BP5LQ7L8J4 393 aa23.96■■□□□ 1.43
SNX25-204ENST00000506896 PLEKHM2Q8IWE5 1019 aa23.96■■□□□ 1.43
SNX25-204ENST00000506896 CNKSR2Q8WXI2 1034 aa23.96■■□□□ 1.43
SNX25-204ENST00000506896 WRNIP1Q96S55 665 aa23.96■■□□□ 1.43
SNX25-204ENST00000506896 CRNKL1Q9BZJ0 848 aaKnown RBP23.96■■□□□ 1.43
SNX25-204ENST00000506896 CSADQ9Y600 493 aa23.96■■□□□ 1.43
SNX25-204ENST00000506896 SNCAIPQ9Y6H5 919 aa23.96■■□□□ 1.43
SNX25-204ENST00000506896 FOCADQ5VW36 1801 aa23.96■■□□□ 1.43
SNX25-204ENST00000506896 TBC1D8O95759 1140 aa23.95■■□□□ 1.42
SNX25-204ENST00000506896 USP5P45974 858 aa23.95■■□□□ 1.42
SNX25-204ENST00000506896 MAP3K10Q02779 954 aa23.95■■□□□ 1.42
SNX25-204ENST00000506896 TICAM2Q86XR7 235 aa23.95■■□□□ 1.42
SNX25-204ENST00000506896 IFNL1Q8IU54 200 aa23.95■■□□□ 1.42
SNX25-204ENST00000506896 ZKSCAN4Q969J2 545 aaPredicted RBP23.95■■□□□ 1.42
SNX25-204ENST00000506896 EVI5LQ96CN4 794 aa23.95■■□□□ 1.42
SNX25-204ENST00000506896 MS4A4AQ96JQ5 239 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms