RNA–Protein interactions for RNA: ENST00000506134.5

TRIM6-208, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-208ENST00000506134 ZNF589Q86UQ0 364 aaPredicted RBP11.81□□□□□ -0.52
TRIM6-208ENST00000506134 MAPKAPK5Q8IW41 473 aa11.81□□□□□ -0.52
TRIM6-208ENST00000506134 SDR42E1Q8WUS8 393 aa11.81□□□□□ -0.52
TRIM6-208ENST00000506134 GLIS2Q9BZE0 524 aaPredicted RBP11.81□□□□□ -0.52
TRIM6-208ENST00000506134 DEFB129Q9H1M3 183 aa11.81□□□□□ -0.52
TRIM6-208ENST00000506134 SLC4A4Q9Y6R1 1079 aa11.81□□□□□ -0.52
TRIM6-208ENST00000506134 CNTNAP1P78357 1384 aa11.81□□□□□ -0.52
TRIM6-208ENST00000506134 PITPNM2Q9BZ72 1349 aa11.8□□□□□ -0.52
TRIM6-208ENST00000506134 CDC45O75419 566 aa11.8□□□□□ -0.52
TRIM6-208ENST00000506134 TOMM70O94826 608 aa11.8□□□□□ -0.52
TRIM6-208ENST00000506134 USP5P45974 858 aa11.8□□□□□ -0.52
TRIM6-208ENST00000506134 FMR1Q06787 632 aaKnown RBP eCLIP11.8□□□□□ -0.52
TRIM6-208ENST00000506134 VPS53Q5VIR6 699 aa11.8□□□□□ -0.52
TRIM6-208ENST00000506134 FKBP1CQ5VVH2 108 aa11.8□□□□□ -0.52
TRIM6-208ENST00000506134 POTEHQ6S545 545 aa11.8□□□□□ -0.52
TRIM6-208ENST00000506134 CERS3Q8IU89 383 aa11.8□□□□□ -0.52
TRIM6-208ENST00000506134 APOBEC3FQ8IUX4 373 aaKnown RBP11.8□□□□□ -0.52
TRIM6-208ENST00000506134 SULF1Q8IWU6 871 aa11.8□□□□□ -0.52
TRIM6-208ENST00000506134 CRNKL1Q9BZJ0 848 aaKnown RBP11.8□□□□□ -0.52
TRIM6-208ENST00000506134 TMEM39BQ9GZU3 492 aa11.8□□□□□ -0.52
TRIM6-208ENST00000506134 ECM29Q5VYK3 1845 aa11.8□□□□□ -0.52
TRIM6-208ENST00000506134 GSG1L2A8MUP6 293 aa11.79□□□□□ -0.52
TRIM6-208ENST00000506134 PATL2C9JE40 543 aaKnown RBP11.79□□□□□ -0.52
TRIM6-208ENST00000506134 TRAF5O00463 557 aa11.79□□□□□ -0.52
TRIM6-208ENST00000506134 ENTPD3O75355 529 aa11.79□□□□□ -0.52
TRIM6-208ENST00000506134 ITGBL1O95965 494 aaPredicted RBP11.79□□□□□ -0.52
TRIM6-208ENST00000506134 TNNI2P48788 182 aa11.79□□□□□ -0.52
TRIM6-208ENST00000506134 SH3BP5LQ7L8J4 393 aa11.79□□□□□ -0.52
TRIM6-208ENST00000506134 FAM83AQ86UY5 434 aa11.79□□□□□ -0.52
TRIM6-208ENST00000506134 CDAN1Q8IWY9 1227 aa11.79□□□□□ -0.52
TRIM6-208ENST00000506134 FAM151AQ8WW52 585 aa11.79□□□□□ -0.52
TRIM6-208ENST00000506134 RUFY2Q8WXA3 655 aa11.79□□□□□ -0.52
TRIM6-208ENST00000506134 DCP1AQ9NPI6 582 aaPredicted RBP11.79□□□□□ -0.52
TRIM6-208ENST00000506134 MKRN1Q9UHC7 482 aaKnown RBP11.79□□□□□ -0.52
TRIM6-208ENST00000506134 SAP30BPQ9UHR5 308 aaKnown RBP11.79□□□□□ -0.52
TRIM6-208ENST00000506134 FLT1P17948 1338 aa11.79□□□□□ -0.52
TRIM6-208ENST00000506134 CCDC171Q6TFL3 1326 aa11.79□□□□□ -0.52
TRIM6-208ENST00000506134 DDTLA6NHG4 134 aaPredicted RBP11.79□□□□□ -0.52
TRIM6-208ENST00000506134 FOXP2O15409 715 aa11.79□□□□□ -0.52
TRIM6-208ENST00000506134 SGSM2O43147 1006 aa11.79□□□□□ -0.52
TRIM6-208ENST00000506134 APPP05067 770 aa11.79□□□□□ -0.52
TRIM6-208ENST00000506134 GNAT2P19087 354 aa11.79□□□□□ -0.52
TRIM6-208ENST00000506134 TNFAIP1Q13829 316 aa11.79□□□□□ -0.52
TRIM6-208ENST00000506134 REM2Q8IYK8 340 aaPredicted RBP11.79□□□□□ -0.52
TRIM6-208ENST00000506134 RBM46Q8TBY0 533 aaKnown RBP11.79□□□□□ -0.52
TRIM6-208ENST00000506134 TEPSINQ96N21 525 aa11.79□□□□□ -0.52
TRIM6-208ENST00000506134 ESYT1Q9BSJ8 1104 aa11.79□□□□□ -0.52
TRIM6-208ENST00000506134 OSBPL5Q9H0X9 879 aaPredicted RBP11.79□□□□□ -0.52
TRIM6-208ENST00000506134 PALD1Q9ULE6 856 aa11.79□□□□□ -0.52
TRIM6-208ENST00000506134 CDK5RAP2Q96SN8 1893 aa11.78□□□□□ -0.52
TRIM6-208ENST00000506134 SLURP2P0DP57 97 aa11.78□□□□□ -0.52
TRIM6-208ENST00000506134 HSPD1P10809 573 aaKnown RBP11.78□□□□□ -0.52
TRIM6-208ENST00000506134 SLC4A8Q2Y0W8 1093 aa11.78□□□□□ -0.52
TRIM6-208ENST00000506134 NBPF12Q5TAG4 269 aaPredicted RBP11.78□□□□□ -0.52
TRIM6-208ENST00000506134 ZSCAN29Q8IWY8 852 aaPredicted RBP11.78□□□□□ -0.52
TRIM6-208ENST00000506134 IFNL3Q8IZI9 196 aa11.78□□□□□ -0.52
TRIM6-208ENST00000506134 SMC1BQ8NDV3 1235 aa11.78□□□□□ -0.52
TRIM6-208ENST00000506134 ATP8A2Q9NTI2 1148 aa11.78□□□□□ -0.52
TRIM6-208ENST00000506134 MCM9Q9NXL9 1143 aa11.78□□□□□ -0.52
TRIM6-208ENST00000506134 USP17L12C9JPN9 530 aa11.77□□□□□ -0.53
TRIM6-208ENST00000506134 USP17L21D6R901 530 aa11.77□□□□□ -0.53
TRIM6-208ENST00000506134 SMIM22K7EJ46 135 aa11.77□□□□□ -0.53
TRIM6-208ENST00000506134 CYP2D6P10635 497 aa11.77□□□□□ -0.53
TRIM6-208ENST00000506134 MFAP1P55081 439 aaKnown RBP11.77□□□□□ -0.53
TRIM6-208ENST00000506134 PTH1RQ03431 593 aa11.77□□□□□ -0.53
TRIM6-208ENST00000506134 EVX2Q03828 476 aa11.77□□□□□ -0.53
TRIM6-208ENST00000506134 CTR9Q6PD62 1173 aa11.77□□□□□ -0.53
TRIM6-208ENST00000506134 CASC1Q6TDU7 716 aa11.77□□□□□ -0.53
TRIM6-208ENST00000506134 CDCA5Q96FF9 252 aa11.77□□□□□ -0.53
TRIM6-208ENST00000506134 EPB41L4AQ9HCS5 686 aaPredicted RBP11.77□□□□□ -0.53
TRIM6-208ENST00000506134 PPP2R3BQ9Y5P8 575 aa11.77□□□□□ -0.53
TRIM6-208ENST00000506134 RAD50Q92878 1312 aa11.76□□□□□ -0.53
TRIM6-208ENST00000506134 CYP2D7A0A087X1C5 515 aa11.76□□□□□ -0.53
TRIM6-208ENST00000506134 FGAP02671 866 aa11.76□□□□□ -0.53
TRIM6-208ENST00000506134 POLR3DP05423 398 aaPredicted RBP11.76□□□□□ -0.53
TRIM6-208ENST00000506134 PLCD1P51178 756 aa11.76□□□□□ -0.53
TRIM6-208ENST00000506134 MIGA2Q7L4E1 593 aa11.76□□□□□ -0.53
TRIM6-208ENST00000506134 FZD1Q9UP38 647 aa11.76□□□□□ -0.53
TRIM6-208ENST00000506134 FOCADQ5VW36 1801 aa11.75□□□□□ -0.53
TRIM6-208ENST00000506134 BAZ2AQ9UIF9 1905 aaKnown RBP11.75□□□□□ -0.53
TRIM6-208ENST00000506134 MINDY4BA8MYZ0 360 aa11.75□□□□□ -0.53
TRIM6-208ENST00000506134 TDO2P48775 406 aa11.75□□□□□ -0.53
TRIM6-208ENST00000506134 PRKG1Q13976 671 aa11.75□□□□□ -0.53
TRIM6-208ENST00000506134 ALX1Q15699 326 aa11.75□□□□□ -0.53
TRIM6-208ENST00000506134 SUPT20HL1Q3ZLR7 823 aa11.75□□□□□ -0.53
TRIM6-208ENST00000506134 C12orf60Q5U649 245 aa11.75□□□□□ -0.53
TRIM6-208ENST00000506134 CST9Q5W186 159 aa11.75□□□□□ -0.53
TRIM6-208ENST00000506134 GIMAP6Q6P9H5 292 aa11.75□□□□□ -0.53
TRIM6-208ENST00000506134 CHRDL2Q6WN34 429 aa11.75□□□□□ -0.53
TRIM6-208ENST00000506134 DDRGK1Q96HY6 314 aa11.75□□□□□ -0.53
TRIM6-208ENST00000506134 CSRNP1Q96S65 589 aa11.75□□□□□ -0.53
TRIM6-208ENST00000506134 DSCC1Q9BVC3 393 aa11.75□□□□□ -0.53
TRIM6-208ENST00000506134 NACAP1Q9BZK3 213 aa11.75□□□□□ -0.53
TRIM6-208ENST00000506134 NAPBQ9H115 298 aa11.75□□□□□ -0.53
TRIM6-208ENST00000506134 DHX36Q9H2U1 1008 aaKnown RBP11.75□□□□□ -0.53
TRIM6-208ENST00000506134 ZNF408Q9H9D4 720 aa11.75□□□□□ -0.53
TRIM6-208ENST00000506134 PI4KBQ9UBF8 816 aa11.75□□□□□ -0.53
TRIM6-208ENST00000506134 ATRNL1Q5VV63 1379 aa11.75□□□□□ -0.53
TRIM6-208ENST00000506134 RPAP1Q9BWH6 1393 aaPredicted RBP11.75□□□□□ -0.53
TRIM6-208ENST00000506134 MYH1P12882 1939 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms