RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 TPCN1Q9ULQ1 816 aa14.16□□□□□ -0.14
POLR2J3-211ENST00000506060 DAGLAQ9Y4D2 1042 aa14.16□□□□□ -0.14
POLR2J3-211ENST00000506060 BAZ2AQ9UIF9 1905 aaKnown RBP14.15□□□□□ -0.14
POLR2J3-211ENST00000506060 BRCA1P38398 1863 aaKnown RBP14.15□□□□□ -0.14
POLR2J3-211ENST00000506060 B4E1Z4 1266 aa14.15□□□□□ -0.14
POLR2J3-211ENST00000506060 PDCP20941 246 aa14.15□□□□□ -0.14
POLR2J3-211ENST00000506060 MMP14P50281 582 aa14.15□□□□□ -0.14
POLR2J3-211ENST00000506060 GRIK5Q16478 980 aa14.15□□□□□ -0.14
POLR2J3-211ENST00000506060 ME3Q16798 604 aa14.15□□□□□ -0.14
POLR2J3-211ENST00000506060 CCDC178Q5BJE1 867 aa14.15□□□□□ -0.14
POLR2J3-211ENST00000506060 DACT2Q5SW24 774 aa14.15□□□□□ -0.14
POLR2J3-211ENST00000506060 SYNE3Q6ZMZ3 975 aa14.15□□□□□ -0.14
POLR2J3-211ENST00000506060 CCDC83Q8IWF9 413 aa14.15□□□□□ -0.14
POLR2J3-211ENST00000506060 CERS5Q8N5B7 392 aa14.15□□□□□ -0.14
POLR2J3-211ENST00000506060 NBPF3Q9H094 633 aa14.15□□□□□ -0.14
POLR2J3-211ENST00000506060 SERPINA10Q9UK55 444 aa14.15□□□□□ -0.14
POLR2J3-211ENST00000506060 HDAC9Q9UKV0 1011 aa14.15□□□□□ -0.14
POLR2J3-211ENST00000506060 ZNRF3Q9ULT6 936 aa14.15□□□□□ -0.14
POLR2J3-211ENST00000506060 ANGEL1Q9UNK9 670 aaKnown RBP14.15□□□□□ -0.14
POLR2J3-211ENST00000506060 BCS1LQ9Y276 419 aa14.15□□□□□ -0.14
POLR2J3-211ENST00000506060 LTBP3Q9NS15 1303 aa14.15□□□□□ -0.15
POLR2J3-211ENST00000506060 LAMB1P07942 1786 aa14.14□□□□□ -0.15
POLR2J3-211ENST00000506060 F8W031 263 aaPredicted RBP14.14□□□□□ -0.15
POLR2J3-211ENST00000506060 ORC4O43929 436 aa14.14□□□□□ -0.15
POLR2J3-211ENST00000506060 POLR3DP05423 398 aaPredicted RBP14.14□□□□□ -0.15
POLR2J3-211ENST00000506060 EVCP57679 992 aa14.14□□□□□ -0.15
POLR2J3-211ENST00000506060 RRP12Q5JTH9 1297 aaKnown RBP14.14□□□□□ -0.15
POLR2J3-211ENST00000506060 IQCA1Q86XH1 822 aa14.14□□□□□ -0.15
POLR2J3-211ENST00000506060 TGFBRAP1Q8WUH2 860 aa14.14□□□□□ -0.15
POLR2J3-211ENST00000506060 LLPHQ9BRT6 129 aaKnown RBP14.14□□□□□ -0.15
POLR2J3-211ENST00000506060 UBAC1Q9BSL1 405 aa14.14□□□□□ -0.15
POLR2J3-211ENST00000506060 ZNF277Q9NRM2 450 aaPredicted RBP14.14□□□□□ -0.15
POLR2J3-211ENST00000506060 NAP1L2Q9ULW6 460 aaPredicted RBP14.14□□□□□ -0.15
POLR2J3-211ENST00000506060 NAV1Q8NEY1 1877 aa14.14□□□□□ -0.15
POLR2J3-211ENST00000506060 PSME4Q14997 1843 aa14.13□□□□□ -0.15
POLR2J3-211ENST00000506060 IFIT3O14879 490 aaKnown RBP14.13□□□□□ -0.15
POLR2J3-211ENST00000506060 PFKFB2O60825 505 aa14.13□□□□□ -0.15
POLR2J3-211ENST00000506060 KDM4AO75164 1064 aa14.13□□□□□ -0.15
POLR2J3-211ENST00000506060 LIFRP42702 1097 aa14.13□□□□□ -0.15
POLR2J3-211ENST00000506060 CRKP46108 304 aa14.13□□□□□ -0.15
POLR2J3-211ENST00000506060 RBM5P52756 815 aaKnown RBP eCLIP14.13□□□□□ -0.15
POLR2J3-211ENST00000506060 APOBRQ0VD83 1088 aa14.13□□□□□ -0.15
POLR2J3-211ENST00000506060 TMEM67Q5HYA8 995 aa14.13□□□□□ -0.15
POLR2J3-211ENST00000506060 C12orf60Q5U649 245 aa14.13□□□□□ -0.15
POLR2J3-211ENST00000506060 RSBN1LQ6PCB5 846 aaPredicted RBP14.13□□□□□ -0.15
POLR2J3-211ENST00000506060 CPLX2Q6PUV4 134 aaKnown RBP14.13□□□□□ -0.15
POLR2J3-211ENST00000506060 NFXL1Q6ZNB6 911 aa14.13□□□□□ -0.15
POLR2J3-211ENST00000506060 OGFOD1Q8N543 542 aa14.13□□□□□ -0.15
POLR2J3-211ENST00000506060 GTF3C6Q969F1 213 aa14.13□□□□□ -0.15
POLR2J3-211ENST00000506060 ZDHHC15Q96MV8 337 aa14.13□□□□□ -0.15
POLR2J3-211ENST00000506060 GBP4Q96PP9 640 aa14.13□□□□□ -0.15
POLR2J3-211ENST00000506060 LARP6Q9BRS8 491 aaKnown RBP14.13□□□□□ -0.15
POLR2J3-211ENST00000506060 LRRC2Q9BYS8 371 aa14.13□□□□□ -0.15
POLR2J3-211ENST00000506060 TAOK2Q9UL54 1235 aa14.13□□□□□ -0.15
POLR2J3-211ENST00000506060 NEDD4P46934 1319 aa14.13□□□□□ -0.15
POLR2J3-211ENST00000506060 FER1L6Q2WGJ9 1857 aa14.12□□□□□ -0.15
POLR2J3-211ENST00000506060 CCDC69A6NI79 296 aa14.12□□□□□ -0.15
POLR2J3-211ENST00000506060 SH2B2O14492 632 aaPredicted RBP14.12□□□□□ -0.15
POLR2J3-211ENST00000506060 FGRP09769 529 aa14.12□□□□□ -0.15
POLR2J3-211ENST00000506060 SCNN1DP51172 638 aa14.12□□□□□ -0.15
POLR2J3-211ENST00000506060 RHBDL3P58872 404 aa14.12□□□□□ -0.15
POLR2J3-211ENST00000506060 HMGN5P82970 282 aaKnown RBP14.12□□□□□ -0.15
POLR2J3-211ENST00000506060 TNIP1Q15025 636 aa14.12□□□□□ -0.15
POLR2J3-211ENST00000506060 RAB3GAP1Q15042 981 aa14.12□□□□□ -0.15
POLR2J3-211ENST00000506060 CHST3Q7LGC8 479 aa14.12□□□□□ -0.15
POLR2J3-211ENST00000506060 TTC6Q86TZ1 520 aa14.12□□□□□ -0.15
POLR2J3-211ENST00000506060 KIAA0825Q8IV33 1275 aa14.12□□□□□ -0.15
POLR2J3-211ENST00000506060 MAPKAPK5Q8IW41 473 aa14.12□□□□□ -0.15
POLR2J3-211ENST00000506060 AGBL3Q8NEM8 1001 aa14.12□□□□□ -0.15
POLR2J3-211ENST00000506060 MKNK2Q9HBH9 465 aa14.12□□□□□ -0.15
POLR2J3-211ENST00000506060 USP40Q9NVE5 1235 aa14.12□□□□□ -0.15
POLR2J3-211ENST00000506060 ZSWIM5Q9P217 1185 aa14.12□□□□□ -0.15
POLR2J3-211ENST00000506060 MKRN1Q9UHC7 482 aaKnown RBP14.12□□□□□ -0.15
POLR2J3-211ENST00000506060 SCN9AQ15858 1988 aa14.12□□□□□ -0.15
POLR2J3-211ENST00000506060 WDR33Q9C0J8 1336 aaKnown RBP14.12□□□□□ -0.15
POLR2J3-211ENST00000506060 ROBO3Q96MS0 1386 aa14.11□□□□□ -0.15
POLR2J3-211ENST00000506060 ARFGEF1Q9Y6D6 1849 aa14.11□□□□□ -0.15
POLR2J3-211ENST00000506060 KLF18A0A0U1RQI7 1052 aa14.11□□□□□ -0.15
POLR2J3-211ENST00000506060 RANBP6O60518 1105 aaKnown RBP14.11□□□□□ -0.15
POLR2J3-211ENST00000506060 LARGE1O95461 756 aa14.11□□□□□ -0.15
POLR2J3-211ENST00000506060 VIL1P09327 827 aaKnown RBP14.11□□□□□ -0.15
POLR2J3-211ENST00000506060 PTMSP20962 102 aa14.11□□□□□ -0.15
POLR2J3-211ENST00000506060 RCAN1P53805 252 aa14.11□□□□□ -0.15
POLR2J3-211ENST00000506060 ANTXR2P58335 489 aa14.11□□□□□ -0.15
POLR2J3-211ENST00000506060 STK3Q13188 491 aa14.11□□□□□ -0.15
POLR2J3-211ENST00000506060 WTAPQ15007 396 aa14.11□□□□□ -0.15
POLR2J3-211ENST00000506060 CYB5R4Q7L1T6 521 aa14.11□□□□□ -0.15
POLR2J3-211ENST00000506060 SGMS1Q86VZ5 419 aa14.11□□□□□ -0.15
POLR2J3-211ENST00000506060 TMOD2Q9NZR1 351 aa14.11□□□□□ -0.15
POLR2J3-211ENST00000506060 MYH1P12882 1939 aa14.11□□□□□ -0.15
POLR2J3-211ENST00000506060 FLT1P17948 1338 aa14.11□□□□□ -0.15
POLR2J3-211ENST00000506060 CDK5RAP2Q96SN8 1893 aa14.1□□□□□ -0.15
POLR2J3-211ENST00000506060 YDJCA8MPS7 323 aa14.1□□□□□ -0.15
POLR2J3-211ENST00000506060 GOLGA8BA8MQT2 603 aa14.1□□□□□ -0.15
POLR2J3-211ENST00000506060 GOLGA6L22H0YM25 854 aa14.1□□□□□ -0.15
POLR2J3-211ENST00000506060 CPLX1O14810 134 aa14.1□□□□□ -0.15
POLR2J3-211ENST00000506060 NPM3O75607 178 aaKnown RBP14.1□□□□□ -0.15
POLR2J3-211ENST00000506060 CDKL5O76039 1030 aa14.1□□□□□ -0.15
POLR2J3-211ENST00000506060 HLA-DOAP06340 250 aa14.1□□□□□ -0.15
POLR2J3-211ENST00000506060 USP17L8P0C7I0 530 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms