RNA–Protein interactions for RNA: ENST00000505814.5

PTPN20-215, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-215	ENST00000505814	SSH3	Q8TE77	659 aa		11.24	□□□□□ -0.61
PTPN20-215	ENST00000505814	HHIPL1	Q96JK4	782 aa		11.24	□□□□□ -0.61
PTPN20-215	ENST00000505814	PNMA6E	A0A0J9YXQ4	647 aa		11.23	□□□□□ -0.61
PTPN20-215	ENST00000505814	WNT10B	O00744	389 aa		11.23	□□□□□ -0.61
PTPN20-215	ENST00000505814	NRG2	O14511	850 aa	Predicted RBP	11.23	□□□□□ -0.61
PTPN20-215	ENST00000505814	GNAI2	P04899	355 aa		11.23	□□□□□ -0.61
PTPN20-215	ENST00000505814	IL15	P40933	162 aa	Predicted RBP	11.23	□□□□□ -0.61
PTPN20-215	ENST00000505814	GYG1	P46976	350 aa		11.23	□□□□□ -0.61
PTPN20-215	ENST00000505814	KCNJ4	P48050	445 aa		11.23	□□□□□ -0.61
PTPN20-215	ENST00000505814	GTF2I	P78347	998 aa		11.23	□□□□□ -0.61
PTPN20-215	ENST00000505814	METTL24	Q5JXM2	366 aa		11.23	□□□□□ -0.61
PTPN20-215	ENST00000505814	CDC37L1	Q7L3B6	337 aa		11.23	□□□□□ -0.61
PTPN20-215	ENST00000505814	DZIP1L	Q8IYY4	767 aa	Known RBP	11.23	□□□□□ -0.61
PTPN20-215	ENST00000505814	RDH13	Q8NBN7	331 aa		11.23	□□□□□ -0.61
PTPN20-215	ENST00000505814	LPIN2	Q92539	896 aa		11.23	□□□□□ -0.61
PTPN20-215	ENST00000505814	FRAT1	Q92837	279 aa	Predicted RBP	11.23	□□□□□ -0.61
PTPN20-215	ENST00000505814	GGA3	Q9NZ52	723 aa		11.23	□□□□□ -0.61
PTPN20-215	ENST00000505814	PA2G4	Q9UQ80	394 aa	Known RBP	11.23	□□□□□ -0.61
PTPN20-215	ENST00000505814	TLL2	Q9Y6L7	1015 aa		11.23	□□□□□ -0.61
PTPN20-215	ENST00000505814	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.23	□□□□□ -0.61
PTPN20-215	ENST00000505814	PDS5A	Q29RF7	1337 aa	Known RBP	11.23	□□□□□ -0.61
PTPN20-215	ENST00000505814	DDX11L8	A8MPP1	907 aa		11.22	□□□□□ -0.61
PTPN20-215	ENST00000505814	ADH1B	P00325	375 aa		11.22	□□□□□ -0.61
PTPN20-215	ENST00000505814	HIBADH	P31937	336 aa	Known RBP	11.22	□□□□□ -0.61
PTPN20-215	ENST00000505814	AOX1	Q06278	1338 aa		11.22	□□□□□ -0.61
PTPN20-215	ENST00000505814	MAST2	Q6P0Q8	1798 aa		11.22	□□□□□ -0.61
PTPN20-215	ENST00000505814	CLUAP1	Q96AJ1	413 aa		11.22	□□□□□ -0.61
PTPN20-215	ENST00000505814	RFX7	Q2KHR2	1363 aa		11.21	□□□□□ -0.61
PTPN20-215	ENST00000505814	SALL1	Q9NSC2	1324 aa		11.21	□□□□□ -0.61
PTPN20-215	ENST00000505814	CCDC85C	A6NKD9	419 aa		11.21	□□□□□ -0.61
PTPN20-215	ENST00000505814	ADM5	C9JUS6	153 aa		11.21	□□□□□ -0.61
PTPN20-215	ENST00000505814	SRGAP3	O43295	1099 aa		11.21	□□□□□ -0.61
PTPN20-215	ENST00000505814	S1PR4	O95977	384 aa		11.21	□□□□□ -0.61
PTPN20-215	ENST00000505814	SLC19A1	P41440	591 aa		11.21	□□□□□ -0.61
PTPN20-215	ENST00000505814	SCARF1	Q14162	830 aa		11.21	□□□□□ -0.61
PTPN20-215	ENST00000505814	GRIK5	Q16478	980 aa		11.21	□□□□□ -0.61
PTPN20-215	ENST00000505814	NBPF9	Q3BBW0	867 aa		11.21	□□□□□ -0.61
PTPN20-215	ENST00000505814	PUS10	Q3MIT2	529 aa	Known RBP	11.21	□□□□□ -0.61
PTPN20-215	ENST00000505814	SAPCD2	Q86UD0	394 aa		11.21	□□□□□ -0.61
PTPN20-215	ENST00000505814	SULF1	Q8IWU6	871 aa		11.21	□□□□□ -0.61
PTPN20-215	ENST00000505814	ANKLE1	Q8NAG6	615 aa		11.21	□□□□□ -0.61
PTPN20-215	ENST00000505814	ABHD8	Q96I13	439 aa		11.21	□□□□□ -0.61
PTPN20-215	ENST00000505814	NOP58	Q9Y2X3	529 aa	Known RBP	11.21	□□□□□ -0.61
PTPN20-215	ENST00000505814	OTOF	Q9HC10	1997 aa		11.21	□□□□□ -0.62
PTPN20-215	ENST00000505814	AKAP11	Q9UKA4	1901 aa		11.21	□□□□□ -0.62
PTPN20-215	ENST00000505814	FOXN1	O15353	648 aa		11.2	□□□□□ -0.62
PTPN20-215	ENST00000505814	HDLBP	Q00341	1268 aa	Known RBP	11.2	□□□□□ -0.62
PTPN20-215	ENST00000505814	ANGEL2	Q5VTE6	544 aa	Known RBP	11.2	□□□□□ -0.62
PTPN20-215	ENST00000505814	DLK2	Q6UY11	383 aa		11.2	□□□□□ -0.62
PTPN20-215	ENST00000505814	KRT26	Q7Z3Y9	468 aa		11.2	□□□□□ -0.62
PTPN20-215	ENST00000505814	KIAA0825	Q8IV33	1275 aa		11.2	□□□□□ -0.62
PTPN20-215	ENST00000505814	NLRP7	Q8WX94	980 aa		11.2	□□□□□ -0.62
PTPN20-215	ENST00000505814	PHOX2B	Q99453	314 aa		11.2	□□□□□ -0.62
PTPN20-215	ENST00000505814	PRDM10	Q9NQV6	1147 aa		11.2	□□□□□ -0.62
PTPN20-215	ENST00000505814	SUGT1	Q9Y2Z0	365 aa		11.2	□□□□□ -0.62
PTPN20-215	ENST00000505814	PLIN1	O60240	522 aa		11.19	□□□□□ -0.62
PTPN20-215	ENST00000505814	IFIT1	P09914	478 aa	Known RBP	11.19	□□□□□ -0.62
PTPN20-215	ENST00000505814	VEGFB	P49765	207 aa		11.19	□□□□□ -0.62
PTPN20-215	ENST00000505814	MVP	Q14764	893 aa	Known RBP	11.19	□□□□□ -0.62
PTPN20-215	ENST00000505814	ATP2B3	Q16720	1220 aa		11.19	□□□□□ -0.62
PTPN20-215	ENST00000505814	CEP85	Q6P2H3	762 aa		11.19	□□□□□ -0.62
PTPN20-215	ENST00000505814	TRAF7	Q6Q0C0	670 aa		11.19	□□□□□ -0.62
PTPN20-215	ENST00000505814	USP48	Q86UV5	1035 aa		11.19	□□□□□ -0.62
PTPN20-215	ENST00000505814	PANK1	Q8TE04	598 aa		11.19	□□□□□ -0.62
PTPN20-215	ENST00000505814	CDCA5	Q96FF9	252 aa		11.19	□□□□□ -0.62
PTPN20-215	ENST00000505814	MRI	Q9BWK5	157 aa		11.19	□□□□□ -0.62
PTPN20-215	ENST00000505814	SLC6A16	Q9GZN6	736 aa		11.19	□□□□□ -0.62
PTPN20-215	ENST00000505814	SIL1	Q9H173	461 aa		11.19	□□□□□ -0.62
PTPN20-215	ENST00000505814	GPR108	Q9NPR9	543 aa		11.19	□□□□□ -0.62
PTPN20-215	ENST00000505814	SERPINA10	Q9UK55	444 aa		11.19	□□□□□ -0.62
PTPN20-215	ENST00000505814	RCAN3	Q9UKA8	241 aa		11.19	□□□□□ -0.62
PTPN20-215	ENST00000505814	PCDHAC2	Q9Y5I4	1007 aa		11.19	□□□□□ -0.62
PTPN20-215	ENST00000505814	DOCK2	Q92608	1830 aa		11.19	□□□□□ -0.62
PTPN20-215	ENST00000505814	CELF2	O95319	508 aa	Known RBP	11.18	□□□□□ -0.62
PTPN20-215	ENST00000505814	SLC5A1	P13866	664 aa		11.18	□□□□□ -0.62
PTPN20-215	ENST00000505814	ATP8B2	P98198	1209 aa		11.18	□□□□□ -0.62
PTPN20-215	ENST00000505814	MFSD14B	Q5SR56	506 aa		11.18	□□□□□ -0.62
PTPN20-215	ENST00000505814	OGFOD1	Q8N543	542 aa		11.18	□□□□□ -0.62
PTPN20-215	ENST00000505814	TBC1D22A	Q8WUA7	517 aa		11.18	□□□□□ -0.62
PTPN20-215	ENST00000505814	ZBTB40	Q9NUA8	1239 aa		11.18	□□□□□ -0.62
PTPN20-215	ENST00000505814	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.17	□□□□□ -0.62
PTPN20-215	ENST00000505814	FAM155A	B1AL88	458 aa	Predicted RBP	11.17	□□□□□ -0.62
PTPN20-215	ENST00000505814	ADORA1	P30542	326 aa		11.17	□□□□□ -0.62
PTPN20-215	ENST00000505814	PHKA1	P46020	1223 aa		11.17	□□□□□ -0.62
PTPN20-215	ENST00000505814	FKBP1B	P68106	108 aa		11.17	□□□□□ -0.62
PTPN20-215	ENST00000505814	TFCP2	Q12800	502 aa		11.17	□□□□□ -0.62
PTPN20-215	ENST00000505814	PDE3A	Q14432	1141 aa		11.17	□□□□□ -0.62
PTPN20-215	ENST00000505814	CAVIN4	Q5BKX8	364 aa		11.17	□□□□□ -0.62
PTPN20-215	ENST00000505814	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.17	□□□□□ -0.62
PTPN20-215	ENST00000505814	FTSJ3	Q8IY81	847 aa	Known RBP	11.17	□□□□□ -0.62
PTPN20-215	ENST00000505814	DCPS	Q96C86	337 aa	Known RBP	11.17	□□□□□ -0.62
PTPN20-215	ENST00000505814	SPSB2	Q99619	263 aa		11.17	□□□□□ -0.62
PTPN20-215	ENST00000505814	CEP126	Q9P2H0	1117 aa		11.17	□□□□□ -0.62
PTPN20-215	ENST00000505814	MKRN1	Q9UHC7	482 aa	Known RBP	11.17	□□□□□ -0.62
PTPN20-215	ENST00000505814	HDAC9	Q9UKV0	1011 aa		11.17	□□□□□ -0.62
PTPN20-215	ENST00000505814		A0A1B0GUL7	405 aa		11.16	□□□□□ -0.62
PTPN20-215	ENST00000505814	MS4A1	P11836	297 aa		11.16	□□□□□ -0.62
PTPN20-215	ENST00000505814	ARID4A	P29374	1257 aa	Predicted RBP	11.16	□□□□□ -0.62
PTPN20-215	ENST00000505814	GCGR	P47871	477 aa		11.16	□□□□□ -0.62
PTPN20-215	ENST00000505814	FUT2	Q10981	343 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms