RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 KIF4AO95239 1232 aa5.69□□□□□ -1.5
TRAPPC13-208ENST00000505553 USP17L7P0C7H9 530 aa5.69□□□□□ -1.5
TRAPPC13-208ENST00000505553 PTPRAP18433 802 aa5.69□□□□□ -1.5
TRAPPC13-208ENST00000505553 PMEPA1Q969W9 287 aa5.69□□□□□ -1.5
TRAPPC13-208ENST00000505553 KLHDC7BQ96G42 594 aa5.69□□□□□ -1.5
TRAPPC13-208ENST00000505553 ZSWIM4Q9H7M6 989 aa5.69□□□□□ -1.5
TRAPPC13-208ENST00000505553 FOXD3Q9UJU5 478 aaPredicted RBP5.69□□□□□ -1.5
TRAPPC13-208ENST00000505553 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.69□□□□□ -1.5
TRAPPC13-208ENST00000505553 FAM95CA0A1B0GW59 222 aa5.68□□□□□ -1.5
TRAPPC13-208ENST00000505553 B8ZZF3 427 aa5.68□□□□□ -1.5
TRAPPC13-208ENST00000505553 CYP2E1P05181 493 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC13-208ENST00000505553 ATF4P18848 351 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC13-208ENST00000505553 CABP4P57796 275 aa5.68□□□□□ -1.5
TRAPPC13-208ENST00000505553 PWP1Q13610 501 aa5.68□□□□□ -1.5
TRAPPC13-208ENST00000505553 NFKBIBQ15653 356 aa5.68□□□□□ -1.5
TRAPPC13-208ENST00000505553 SGO2Q562F6 1265 aa5.68□□□□□ -1.5
TRAPPC13-208ENST00000505553 MEI1Q5TIA1 1274 aa5.68□□□□□ -1.5
TRAPPC13-208ENST00000505553 USPL1Q5W0Q7 1092 aa5.68□□□□□ -1.5
TRAPPC13-208ENST00000505553 KRTAP5-3Q6L8H2 238 aa5.68□□□□□ -1.5
TRAPPC13-208ENST00000505553 MCF2L2Q86YR7 1114 aa5.68□□□□□ -1.5
TRAPPC13-208ENST00000505553 CEP120Q8N960 986 aa5.68□□□□□ -1.5
TRAPPC13-208ENST00000505553 GPRASP2Q96D09 838 aa5.68□□□□□ -1.5
TRAPPC13-208ENST00000505553 OSGEPQ9NPF4 335 aa5.68□□□□□ -1.5
TRAPPC13-208ENST00000505553 CARMIL2Q6F5E8 1435 aa5.68□□□□□ -1.5
TRAPPC13-208ENST00000505553 MEGF11A6BM72 1044 aa5.67□□□□□ -1.5
TRAPPC13-208ENST00000505553 GADD45BO75293 160 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC13-208ENST00000505553 FGRP09769 529 aa5.67□□□□□ -1.5
TRAPPC13-208ENST00000505553 GSTT1P30711 240 aa5.67□□□□□ -1.5
TRAPPC13-208ENST00000505553 PIP4K2BP78356 416 aa5.67□□□□□ -1.5
TRAPPC13-208ENST00000505553 PAK2Q13177 524 aa5.67□□□□□ -1.5
TRAPPC13-208ENST00000505553 PI16Q6UXB8 463 aa5.67□□□□□ -1.5
TRAPPC13-208ENST00000505553 ERMP1Q7Z2K6 904 aa5.67□□□□□ -1.5
TRAPPC13-208ENST00000505553 GALNT12Q8IXK2 581 aa5.67□□□□□ -1.5
TRAPPC13-208ENST00000505553 BHLHE22Q8NFJ8 381 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC13-208ENST00000505553 TMEM40Q8WWA1 233 aa5.67□□□□□ -1.5
TRAPPC13-208ENST00000505553 TOX2Q96NM4 488 aa5.67□□□□□ -1.5
TRAPPC13-208ENST00000505553 NOC4LQ9BVI4 516 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-208ENST00000505553 BCO2Q9BYV7 579 aa5.67□□□□□ -1.5
TRAPPC13-208ENST00000505553 ADAM19Q9H013 955 aa5.67□□□□□ -1.5
TRAPPC13-208ENST00000505553 OSBPL2Q9H1P3 480 aa5.67□□□□□ -1.5
TRAPPC13-208ENST00000505553 NPHS2Q9NP85 383 aa5.67□□□□□ -1.5
TRAPPC13-208ENST00000505553 SH2B1Q9NRF2 756 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC13-208ENST00000505553 CES1P23141 567 aa5.66□□□□□ -1.5
TRAPPC13-208ENST00000505553 PLCL1Q15111 1095 aa5.66□□□□□ -1.5
TRAPPC13-208ENST00000505553 NFE2L2Q16236 605 aa5.66□□□□□ -1.5
TRAPPC13-208ENST00000505553 NXPE4Q6UWF7 544 aa5.66□□□□□ -1.5
TRAPPC13-208ENST00000505553 ATG4DQ86TL0 474 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC13-208ENST00000505553 CKAP2LQ8IYA6 745 aa5.66□□□□□ -1.5
TRAPPC13-208ENST00000505553 FAM168AQ92567 244 aa5.66□□□□□ -1.5
TRAPPC13-208ENST00000505553 SEC16BQ96JE7 1060 aa5.66□□□□□ -1.5
TRAPPC13-208ENST00000505553 POP1Q99575 1024 aaKnown RBP5.66□□□□□ -1.5
TRAPPC13-208ENST00000505553 TMEM63CQ9P1W3 806 aa5.66□□□□□ -1.5
TRAPPC13-208ENST00000505553 H3BRJ5 948 aa5.65□□□□□ -1.5
TRAPPC13-208ENST00000505553 CLSTN1O94985 981 aa5.65□□□□□ -1.5
TRAPPC13-208ENST00000505553 EPHA1P21709 976 aa5.65□□□□□ -1.5
TRAPPC13-208ENST00000505553 NBPF6Q5VWK0 638 aa5.65□□□□□ -1.5
TRAPPC13-208ENST00000505553 DUSP27Q5VZP5 1158 aa5.65□□□□□ -1.5
TRAPPC13-208ENST00000505553 SDE2Q6IQ49 451 aa5.65□□□□□ -1.5
TRAPPC13-208ENST00000505553 RELL1Q8IUW5 271 aa5.65□□□□□ -1.5
TRAPPC13-208ENST00000505553 STK11IPQ8N1F8 1099 aa5.65□□□□□ -1.5
TRAPPC13-208ENST00000505553 ZSCAN18Q8TBC5 510 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC13-208ENST00000505553 RASGRP4Q8TDF6 673 aa5.65□□□□□ -1.5
TRAPPC13-208ENST00000505553 FAM84AQ96KN4 292 aa5.65□□□□□ -1.5
TRAPPC13-208ENST00000505553 NBPF4Q96M43 638 aa5.65□□□□□ -1.5
TRAPPC13-208ENST00000505553 TBC1D32Q96NH3 1257 aa5.65□□□□□ -1.5
TRAPPC13-208ENST00000505553 RSRP1Q9BUV0 290 aa5.65□□□□□ -1.5
TRAPPC13-208ENST00000505553 CNTN3Q9P232 1028 aa5.65□□□□□ -1.5
TRAPPC13-208ENST00000505553 KANSL3Q9P2N6 904 aa5.65□□□□□ -1.5
TRAPPC13-208ENST00000505553 SALL4Q9UJQ4 1053 aa5.65□□□□□ -1.5
TRAPPC13-208ENST00000505553 TTF2Q9UNY4 1162 aaKnown RBP5.65□□□□□ -1.5
TRAPPC13-208ENST00000505553 TRAK1Q9UPV9 953 aa5.65□□□□□ -1.5
TRAPPC13-208ENST00000505553 SLC5A6Q9Y289 635 aa5.65□□□□□ -1.5
TRAPPC13-208ENST00000505553 RLBP1P12271 317 aa5.65□□□□□ -1.51
TRAPPC13-208ENST00000505553 ARL4DP49703 201 aa5.65□□□□□ -1.51
TRAPPC13-208ENST00000505553 USP11P51784 963 aa5.65□□□□□ -1.51
TRAPPC13-208ENST00000505553 NLRP12P59046 1061 aa5.65□□□□□ -1.51
TRAPPC13-208ENST00000505553 ZNF792Q3KQV3 632 aa5.65□□□□□ -1.51
TRAPPC13-208ENST00000505553 NUTM2GQ5VZR2 741 aa5.65□□□□□ -1.51
TRAPPC13-208ENST00000505553 ZAR1Q86SH2 424 aa5.65□□□□□ -1.51
TRAPPC13-208ENST00000505553 C1orf127Q8N9H9 656 aa5.65□□□□□ -1.51
TRAPPC13-208ENST00000505553 C12orf50Q8NA57 414 aaPredicted RBP5.65□□□□□ -1.51
TRAPPC13-208ENST00000505553 SPON2Q9BUD6 331 aa5.65□□□□□ -1.51
TRAPPC13-208ENST00000505553 YIPF2Q9BWQ6 316 aa5.65□□□□□ -1.51
TRAPPC13-208ENST00000505553 TBX22Q9Y458 520 aa5.65□□□□□ -1.51
TRAPPC13-208ENST00000505553 POLR3DP05423 398 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC13-208ENST00000505553 SSBP05455 408 aaKnown RBP eCLIP5.64□□□□□ -1.51
TRAPPC13-208ENST00000505553 CYP27A1Q02318 531 aa5.64□□□□□ -1.51
TRAPPC13-208ENST00000505553 KIAA0825Q8IV33 1275 aa5.64□□□□□ -1.51
TRAPPC13-208ENST00000505553 MRFAP1L1Q96HT8 127 aa5.64□□□□□ -1.51
TRAPPC13-208ENST00000505553 PIF1Q9H611 641 aa5.64□□□□□ -1.51
TRAPPC13-208ENST00000505553 CYP4F12Q9HCS2 524 aa5.64□□□□□ -1.51
TRAPPC13-208ENST00000505553 KBTBD4Q9NVX7 518 aa5.64□□□□□ -1.51
TRAPPC13-208ENST00000505553 PDE2AO00408 941 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC13-208ENST00000505553 EREGO14944 169 aa5.63□□□□□ -1.51
TRAPPC13-208ENST00000505553 XRCC5P13010 732 aaKnown RBP5.63□□□□□ -1.51
TRAPPC13-208ENST00000505553 EDN3P14138 238 aa5.63□□□□□ -1.51
TRAPPC13-208ENST00000505553 GRM2Q14416 872 aa5.63□□□□□ -1.51
TRAPPC13-208ENST00000505553 KIAA0319Q5VV43 1072 aa5.63□□□□□ -1.51
TRAPPC13-208ENST00000505553 ZNF746Q6NUN9 644 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC13-208ENST00000505553 ADAMTSL4Q6UY14 1074 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms