RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 LRRC37AA6NMS7 1700 aa13.18□□□□□ -0.3
NFKB1-205ENST00000505458 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.18□□□□□ -0.3
NFKB1-205ENST00000505458 ORC4O43929 436 aa13.18□□□□□ -0.3
NFKB1-205ENST00000505458 SSRP1Q08945 709 aaKnown RBP13.18□□□□□ -0.3
NFKB1-205ENST00000505458 PTF1AQ7RTS3 328 aa13.18□□□□□ -0.3
NFKB1-205ENST00000505458 IQCA1Q86XH1 822 aa13.18□□□□□ -0.3
NFKB1-205ENST00000505458 SLF2Q8IX21 1173 aa13.18□□□□□ -0.3
NFKB1-205ENST00000505458 NSUN4Q96CB9 384 aaKnown RBP13.18□□□□□ -0.3
NFKB1-205ENST00000505458 RBM28Q9NW13 759 aaKnown RBP13.18□□□□□ -0.3
NFKB1-205ENST00000505458 CCDC39Q9UFE4 941 aa13.18□□□□□ -0.3
NFKB1-205ENST00000505458 SAFBQ15424 915 aaKnown RBP eCLIP13.18□□□□□ -0.3
NFKB1-205ENST00000505458 CRAMP1Q96RY5 1269 aa13.18□□□□□ -0.3
NFKB1-205ENST00000505458 RGPD3A6NKT7 1758 aaPredicted RBP13.18□□□□□ -0.3
NFKB1-205ENST00000505458 RGPD4Q7Z3J3 1758 aa13.18□□□□□ -0.3
NFKB1-205ENST00000505458 HOXA10P31260 410 aaPredicted RBP13.17□□□□□ -0.3
NFKB1-205ENST00000505458 ZSWIM5Q9P217 1185 aa13.17□□□□□ -0.3
NFKB1-205ENST00000505458 IRS2Q9Y4H2 1338 aa13.17□□□□□ -0.3
NFKB1-205ENST00000505458 BRWD3Q6RI45 1802 aa13.17□□□□□ -0.3
NFKB1-205ENST00000505458 SNAP23O00161 211 aa13.17□□□□□ -0.3
NFKB1-205ENST00000505458 RTN1Q16799 776 aa13.17□□□□□ -0.3
NFKB1-205ENST00000505458 PRR5LQ6MZQ0 368 aa13.17□□□□□ -0.3
NFKB1-205ENST00000505458 FMNL1O95466 1100 aaPredicted RBP13.17□□□□□ -0.3
NFKB1-205ENST00000505458 BAG3O95817 575 aa13.17□□□□□ -0.3
NFKB1-205ENST00000505458 XBP1P17861 261 aa13.17□□□□□ -0.3
NFKB1-205ENST00000505458 ADD1P35611 737 aaKnown RBP13.17□□□□□ -0.3
NFKB1-205ENST00000505458 KCNQ4P56696 695 aa13.17□□□□□ -0.3
NFKB1-205ENST00000505458 ZNF772Q68DY9 489 aaPredicted RBP13.17□□□□□ -0.3
NFKB1-205ENST00000505458 DZIP1Q86YF9 867 aaKnown RBP13.17□□□□□ -0.3
NFKB1-205ENST00000505458 ALG1Q9BT22 464 aa13.17□□□□□ -0.3
NFKB1-205ENST00000505458 FUCA2Q9BTY2 467 aa13.17□□□□□ -0.3
NFKB1-205ENST00000505458 ANKIB1Q9P2G1 1089 aa13.17□□□□□ -0.3
NFKB1-205ENST00000505458 MIGA1Q8NAN2 632 aa13.16□□□□□ -0.3
NFKB1-205ENST00000505458 TOMM22Q9NS69 142 aa13.16□□□□□ -0.3
NFKB1-205ENST00000505458 TFIP11Q9UBB9 837 aaKnown RBP13.16□□□□□ -0.3
NFKB1-205ENST00000505458 DDAH1O94760 285 aa13.16□□□□□ -0.3
NFKB1-205ENST00000505458 GYS1P13807 737 aa13.16□□□□□ -0.3
NFKB1-205ENST00000505458 CTDSPL2Q05D32 466 aa13.16□□□□□ -0.3
NFKB1-205ENST00000505458 TDRD7Q8NHU6 1098 aaKnown RBP13.16□□□□□ -0.3
NFKB1-205ENST00000505458 TBC1D22AQ8WUA7 517 aa13.16□□□□□ -0.3
NFKB1-205ENST00000505458 ESPNB1AK53 854 aa13.16□□□□□ -0.3
NFKB1-205ENST00000505458 DEXIO95424 95 aa13.16□□□□□ -0.3
NFKB1-205ENST00000505458 TPM3P06753 285 aa13.16□□□□□ -0.3
NFKB1-205ENST00000505458 PLCG2P16885 1265 aa13.16□□□□□ -0.3
NFKB1-205ENST00000505458 KIF23Q02241 960 aaPredicted RBP13.16□□□□□ -0.3
NFKB1-205ENST00000505458 FAM160A1Q05DH4 1040 aa13.16□□□□□ -0.3
NFKB1-205ENST00000505458 PDE4BQ07343 736 aa13.16□□□□□ -0.3
NFKB1-205ENST00000505458 STK38Q15208 465 aa13.16□□□□□ -0.3
NFKB1-205ENST00000505458 MYSM1Q5VVJ2 828 aa13.16□□□□□ -0.3
NFKB1-205ENST00000505458 MICU3Q86XE3 530 aa13.16□□□□□ -0.3
NFKB1-205ENST00000505458 ZNF287Q9HBT7 754 aa13.16□□□□□ -0.3
NFKB1-205ENST00000505458 PODXL2Q9NZ53 605 aa13.16□□□□□ -0.3
NFKB1-205ENST00000505458 ECM29Q5VYK3 1845 aa13.15□□□□□ -0.3
NFKB1-205ENST00000505458 KINO60870 393 aaKnown RBP13.15□□□□□ -0.3
NFKB1-205ENST00000505458 SERPINB2P05120 415 aa13.15□□□□□ -0.3
NFKB1-205ENST00000505458 MECOMQ03112 1051 aa13.15□□□□□ -0.3
NFKB1-205ENST00000505458 GNL2Q13823 731 aaKnown RBP13.15□□□□□ -0.3
NFKB1-205ENST00000505458 ADALQ6DHV7 355 aa13.15□□□□□ -0.3
NFKB1-205ENST00000505458 SASS6Q6UVJ0 657 aa13.15□□□□□ -0.3
NFKB1-205ENST00000505458 FAM200AQ8TCP9 573 aa13.15□□□□□ -0.3
NFKB1-205ENST00000505458 DACT1Q9NYF0 836 aa13.15□□□□□ -0.3
NFKB1-205ENST00000505458 LDHBP07195 334 aaKnown RBP13.15□□□□□ -0.3
NFKB1-205ENST00000505458 SF3A1Q15459 793 aaKnown RBP13.15□□□□□ -0.3
NFKB1-205ENST00000505458 ZSCAN30Q86W11 494 aa13.15□□□□□ -0.3
NFKB1-205ENST00000505458 KLRG2A4D1S0 409 aaPredicted RBP13.15□□□□□ -0.3
NFKB1-205ENST00000505458 PRKAB2O43741 272 aa13.15□□□□□ -0.3
NFKB1-205ENST00000505458 CATIPQ7Z7H3 387 aa13.15□□□□□ -0.3
NFKB1-205ENST00000505458 MRPS27Q92552 414 aaKnown RBP13.15□□□□□ -0.3
NFKB1-205ENST00000505458 USP28Q96RU2 1077 aa13.15□□□□□ -0.3
NFKB1-205ENST00000505458 RNF26Q9BY78 433 aaPredicted RBP13.15□□□□□ -0.3
NFKB1-205ENST00000505458 GPHNQ9NQX3 736 aaPredicted RBP13.15□□□□□ -0.3
NFKB1-205ENST00000505458 MORC2Q9Y6X9 1032 aaPredicted RBP13.15□□□□□ -0.3
NFKB1-205ENST00000505458 CLCN1P35523 988 aa13.14□□□□□ -0.31
NFKB1-205ENST00000505458 NTRK3Q16288 839 aa13.14□□□□□ -0.31
NFKB1-205ENST00000505458 FAM177A1Q8N128 213 aaPredicted RBP13.14□□□□□ -0.31
NFKB1-205ENST00000505458 NRXN2Q9P2S2 1712 aa13.14□□□□□ -0.31
NFKB1-205ENST00000505458 PLSCR1O15162 318 aa13.14□□□□□ -0.31
NFKB1-205ENST00000505458 PPP4CP60510 307 aa13.14□□□□□ -0.31
NFKB1-205ENST00000505458 RBM6P78332 1123 aaKnown RBP13.14□□□□□ -0.31
NFKB1-205ENST00000505458 AKAP17AQ02040 695 aaKnown RBP13.14□□□□□ -0.31
NFKB1-205ENST00000505458 FAM173BQ6P4H8 233 aa13.14□□□□□ -0.31
NFKB1-205ENST00000505458 NLGN1Q8N2Q7 840 aa13.14□□□□□ -0.31
NFKB1-205ENST00000505458 PGBD1Q96JS3 809 aa13.14□□□□□ -0.31
NFKB1-205ENST00000505458 LRRC4BQ9NT99 713 aa13.14□□□□□ -0.31
NFKB1-205ENST00000505458 GGA1Q9UJY5 639 aa13.14□□□□□ -0.31
NFKB1-205ENST00000505458 IQSEC3Q9UPP2 1182 aaPredicted RBP13.14□□□□□ -0.31
NFKB1-205ENST00000505458 ME1P48163 572 aa13.14□□□□□ -0.31
NFKB1-205ENST00000505458 RRP12Q5JTH9 1297 aaKnown RBP13.14□□□□□ -0.31
NFKB1-205ENST00000505458 ZNF654Q8IZM8 581 aa13.14□□□□□ -0.31
NFKB1-205ENST00000505458 ZSCAN10Q96SZ4 725 aaPredicted RBP13.14□□□□□ -0.31
NFKB1-205ENST00000505458 SUGT1Q9Y2Z0 365 aa13.14□□□□□ -0.31
NFKB1-205ENST00000505458 ROBO3Q96MS0 1386 aa13.14□□□□□ -0.31
NFKB1-205ENST00000505458 MINDY4BA8MYZ0 360 aa13.13□□□□□ -0.31
NFKB1-205ENST00000505458 PPP6R2O75170 966 aa13.13□□□□□ -0.31
NFKB1-205ENST00000505458 LIG1P18858 919 aa13.13□□□□□ -0.31
NFKB1-205ENST00000505458 KRT40Q6A162 431 aa13.13□□□□□ -0.31
NFKB1-205ENST00000505458 CCAR1Q8IX12 1150 aaKnown RBP13.13□□□□□ -0.31
NFKB1-205ENST00000505458 LINC00301Q8NCQ3 95 aa13.13□□□□□ -0.31
NFKB1-205ENST00000505458 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.13□□□□□ -0.31
NFKB1-205ENST00000505458 MSNP26038 577 aaKnown RBP13.13□□□□□ -0.31
NFKB1-205ENST00000505458 U2AF2P26368 475 aaKnown RBP eCLIP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms